| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116457
Identifier: 197116457
GI number: 197116457
Start: 69610
End: 70254
Strand: Direct
Name: 197116457
Synonym: Gbem_0057
Alternate gene names: NA
Gene position: 69610-70254 (Clockwise)
Preceding gene: 197116456
Following gene: 197116466
Centisome position: 1.51
GC content: 55.66
Gene sequence:
>645_bases ATGAAAAGGACAGATATATTTAAGATCACACTGGCAGGGATCGCCGCAATCGTGGCGGTTACCTTTGGAGCGCCACGTAA TGCTGCAGCCCATTGCGACACGCTCGATGGCCCCGTAATCCAGGATGCACACAAGGCGTTGGAGGCGAAGGACATCACCC CTGTTCTCAAATGGGTGAAAGCGAAAGATGAAAAGGCGGTCAAAGCGGCATTCAACAAGGCACTTGCCGCGAAAGGAGCT AATGCTGAAACTGCCCACCATAAATTTTTCGCAACCCTGGTGAAGATTCATCGTGCCGGCGAAGGTGCTCCCTTCACGGG ATTGAAACCAGCCGGAGAGGTGGAACCTGCGGTAGCCGAAGCAGACAAGGCCTTGGCCGGCGGTTCGGCTGATGCACTGG TAAAACTGGTTACCGACGATGTCACGGCGGGCATAAACAAGCGTTACGAGCGTGCCGCTGCCGCCTACAAGCACAAGGAT GAAAGCGTTGCCCAGGGGCGTGAGTTCGTAGAGGCGTATGTGGAGTTCACGCACTACGTGGAAAAGCTTCACATGGATGC TACCGGTAAAGGTGCTCATGGCGAACATAAGGAACCGGCCAAGGAGCACGGCGGCCATGCAGATCACGGCGCCGACAAGC ACTGA
Upstream 100 bases:
>100_bases TCGGCTGTCGCCGCGACCTCCTGGTCGAGGCGCTGCGGCGCATGCGGGTGGCGCTGGAGGCGCGTACGGGAAACTGACAC GACCACACAGGAGATATCGT
Downstream 100 bases:
>100_bases CGGGCAGAAAGAGTCAGTTAGTATGAAAACAGAAGTGCCAGTTGCGATTGCCGCAGCTGGCACTTTTTCTTTAGCCTCCC TGATTGTTTTCTGGCCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH
Sequences:
>Translated_214_residues MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH >Mature_214_residues MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22681; Mature: 22681
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH AKDEKAVKAAFNKALAAKGANAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH ADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKDESVAQGREFVEAYVEFTHYV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH AKDEKAVKAAFNKALAAKGANAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH ADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKDESVAQGREFVEAYVEFTHYV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA