Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116457

Identifier: 197116457

GI number: 197116457

Start: 69610

End: 70254

Strand: Direct

Name: 197116457

Synonym: Gbem_0057

Alternate gene names: NA

Gene position: 69610-70254 (Clockwise)

Preceding gene: 197116456

Following gene: 197116466

Centisome position: 1.51

GC content: 55.66

Gene sequence:

>645_bases
ATGAAAAGGACAGATATATTTAAGATCACACTGGCAGGGATCGCCGCAATCGTGGCGGTTACCTTTGGAGCGCCACGTAA
TGCTGCAGCCCATTGCGACACGCTCGATGGCCCCGTAATCCAGGATGCACACAAGGCGTTGGAGGCGAAGGACATCACCC
CTGTTCTCAAATGGGTGAAAGCGAAAGATGAAAAGGCGGTCAAAGCGGCATTCAACAAGGCACTTGCCGCGAAAGGAGCT
AATGCTGAAACTGCCCACCATAAATTTTTCGCAACCCTGGTGAAGATTCATCGTGCCGGCGAAGGTGCTCCCTTCACGGG
ATTGAAACCAGCCGGAGAGGTGGAACCTGCGGTAGCCGAAGCAGACAAGGCCTTGGCCGGCGGTTCGGCTGATGCACTGG
TAAAACTGGTTACCGACGATGTCACGGCGGGCATAAACAAGCGTTACGAGCGTGCCGCTGCCGCCTACAAGCACAAGGAT
GAAAGCGTTGCCCAGGGGCGTGAGTTCGTAGAGGCGTATGTGGAGTTCACGCACTACGTGGAAAAGCTTCACATGGATGC
TACCGGTAAAGGTGCTCATGGCGAACATAAGGAACCGGCCAAGGAGCACGGCGGCCATGCAGATCACGGCGCCGACAAGC
ACTGA

Upstream 100 bases:

>100_bases
TCGGCTGTCGCCGCGACCTCCTGGTCGAGGCGCTGCGGCGCATGCGGGTGGCGCTGGAGGCGCGTACGGGAAACTGACAC
GACCACACAGGAGATATCGT

Downstream 100 bases:

>100_bases
CGGGCAGAAAGAGTCAGTTAGTATGAAAACAGAAGTGCCAGTTGCGATTGCCGCAGCTGGCACTTTTTCTTTAGCCTCCC
TGATTGTTTTCTGGCCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA
NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD
ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH

Sequences:

>Translated_214_residues
MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA
NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD
ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH
>Mature_214_residues
MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVKAKDEKAVKAAFNKALAAKGA
NAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAEADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKD
ESVAQGREFVEAYVEFTHYVEKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22681; Mature: 22681

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
AKDEKAVKAAFNKALAAKGANAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKDESVAQGREFVEAYVEFTHYV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH
HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRTDIFKITLAGIAAIVAVTFGAPRNAAAHCDTLDGPVIQDAHKALEAKDITPVLKWVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
AKDEKAVKAAFNKALAAKGANAETAHHKFFATLVKIHRAGEGAPFTGLKPAGEVEPAVAE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ADKALAGGSADALVKLVTDDVTAGINKRYERAAAAYKHKDESVAQGREFVEAYVEFTHYV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EKLHMDATGKGAHGEHKEPAKEHGGHADHGADKH
HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA