Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116455

Identifier: 197116455

GI number: 197116455

Start: 66327

End: 68432

Strand: Direct

Name: 197116455

Synonym: Gbem_0055

Alternate gene names: NA

Gene position: 66327-68432 (Clockwise)

Preceding gene: 197116453

Following gene: 197116456

Centisome position: 1.44

GC content: 61.97

Gene sequence:

>2106_bases
ATGGATCTGAGAAAAACACATTCAGTAATACTGACAGAAGGGGACCCCGAACAGAAAAGGTCCGAGATACTGGATTACTT
CCATGCCACCTTCACCATCGACGAGCGGCTCTATGAGACCCTGAAGGACGAATCGACCTTCTATCTTAAGGGGGACCACC
TCCGGCATCCGCTCATCTTCTACTACGGCCATACGGCTACCTTCTTCATCAACAAGCTCATCATCGCCCGGGTCATAGAC
CGGCGCGTGAATCCCCGCTTCGAATCGCTCTTCGCCGTCGGCGTGGACGAAATGTCCTGGGACGACCTGAACGAGTCTCA
TTACGACTGGCCCACCCCCGGCGAGGTGAAGCGTTACCGGGACCAGGTGCGCGACCTGGTGGACGGCCTGATCAAGACGC
TGCCGCTTACCCTCCCCATCACCTGGGAACATCCCTTCTGGGCCATCATGATGGGGATCGAGCACGAGCGGATCCACCTG
GAGACCTCGTCGGTGCTGATCCGCCAGCTTCCCCTGGACCAGGTGCGGCGCCACGATTTCTGGGAAATCTGCCGGGAGTC
CGGCGAGCCCGCGGCAAACGAACTGCTGCCGGTTGCCGCCGGGAGGGTGAGGCTTGGGAAAGATGAAGGGCATCCCCTCT
ACGGCTGGGACAACGAGTACGGAAGCCGCGAGGCGAAGGTCGAGGCTTTCTCCGCCTCGAAGTTCCTGGTCTCGAACCGC
GAGTACCTAGCCTTCGTCAAGGCCGGGGGGTACAGGGAGCGGGGGTGGTGGACGGAGGAGGGGTGGAACTGGCGCAGCTT
TAAGCAGGCGGAGCATCCTCTTTTCTGGGTGGAGCGCGAATGGGGGTGGGGGCTCAGAACCATGCTGGAGATCATCGATC
TTCCGTGGAACTGGCCGGTCGAGGTGAATTATCTGGAGGCGAAGGCGTTCTGCAACTGGCTCTCCGCTAAAAGCGGCAAA
TCGATCAGGCTCCCGACCGAGGATGAGTGGTACCACCTGCGCGACCTGGCGGGGGTGCCGGACCAGCCCGGATGGAGCCG
GGCGCCGGGCAACATAAACCTCGAATACTGGGCTTCCTCCTGCCCGGTGGGCCGATTCGCCTTCGGCGATTTCTTCGACC
TCATCGGCAACGTCTGGCAGTGGACGGAGACTCCCATCTATCCCTTCCACGGCTTCCGGGTCCATCCCTGGTACGACGAC
TTCTCGACCCCCACCTTCGACACGCGGCACAACCTGATCAAGGGGGGCTCCTGGATCTCGACCGGCAACGAAGCGACCCG
CGATTCACGCTACGCCTTCAGGAGGCACTTCTTCCAGCACGCCGGTTTCCGCTACGTCGAAAGCGCGCATCCTGTCGAGA
TCCACGAGGACCCGTACGAGACGGACGCGCTTGCCGCGCAGTATTGCGATGCGCACTACGGACCCGAGCATTTCGGAGTC
CCCAACTTCCCCAGGGCCTGCGCGGAGATCTGCCTTGAGTTGACCCGCGGGCGCTCCCGGGGGCATGCGCTCGACCTGGG
GTGCGCCGTCGGGCGGGCCAGCTTCGAGCTTGCCCGGGGCTTTGACCAGGTGACTGGGCTCGATTTTTCGAGCCGCTTCT
TCCGCCTGGCCGCGAGGATGCAGGATGAGGGATTTCTCCGCTATGCGCTGCCGGAGGAGGGGGAGGTGGTTTCCTTCAAC
GAGCTGGAGCTGGCGGATCTGGGGCTTAAGGAGGTCAGGGAGCGGGTCGAGTTTTTCCAGGCGGACGCCTGCAACCTCCC
CGACAAGTTCACCGGCTACGACCTGGTACTGGCTGCGAACCTGATCGACCGGCTATATTCGCCGCGCCGCTTCCTGGCGG
CGATACGCGAAAGGCTCAACCCCGGCGGGCTCCTGGTGATCGCGTCCCCCTATACCTGGCTTGAGGAATACACGAAAAAG
GACGAGTGGTTGGGAGGTTACCGGGAAGCGGGAGAACCGGTGTGGACTATAGATGGACTATCGCGGGAACTTTTGCCATA
CTTCACGCCGCTCGGTGCTCCGCGCGAGATCCCGTTCGTGATCAGGGAGACGCGCCGCAAGTTCCAGTACAGCATCGCGC
AACTGACGGTATGGGAGCTTAAATGA

Upstream 100 bases:

>100_bases
AGTCTGATCATACTGACATAGCGCCTGTAACAGCAGGTACTAAAGCCAGTATATCGGCAACTGTTGATGACATTAACAAA
AGGAAATAGTGAGCGTTATT

Downstream 100 bases:

>100_bases
CCAAAAAGTTCGACTTCGACGAGATCATCGACCGGCGCGGCACCTCCAGCGAAAAGTGGGACAAGTACCGCGACCGCGAC
ATCATTCCCCTCTGGGTGGC

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MDLRKTHSVILTEGDPEQKRSEILDYFHATFTIDERLYETLKDESTFYLKGDHLRHPLIFYYGHTATFFINKLIIARVID
RRVNPRFESLFAVGVDEMSWDDLNESHYDWPTPGEVKRYRDQVRDLVDGLIKTLPLTLPITWEHPFWAIMMGIEHERIHL
ETSSVLIRQLPLDQVRRHDFWEICRESGEPAANELLPVAAGRVRLGKDEGHPLYGWDNEYGSREAKVEAFSASKFLVSNR
EYLAFVKAGGYRERGWWTEEGWNWRSFKQAEHPLFWVEREWGWGLRTMLEIIDLPWNWPVEVNYLEAKAFCNWLSAKSGK
SIRLPTEDEWYHLRDLAGVPDQPGWSRAPGNINLEYWASSCPVGRFAFGDFFDLIGNVWQWTETPIYPFHGFRVHPWYDD
FSTPTFDTRHNLIKGGSWISTGNEATRDSRYAFRRHFFQHAGFRYVESAHPVEIHEDPYETDALAAQYCDAHYGPEHFGV
PNFPRACAEICLELTRGRSRGHALDLGCAVGRASFELARGFDQVTGLDFSSRFFRLAARMQDEGFLRYALPEEGEVVSFN
ELELADLGLKEVRERVEFFQADACNLPDKFTGYDLVLAANLIDRLYSPRRFLAAIRERLNPGGLLVIASPYTWLEEYTKK
DEWLGGYREAGEPVWTIDGLSRELLPYFTPLGAPREIPFVIRETRRKFQYSIAQLTVWELK

Sequences:

>Translated_701_residues
MDLRKTHSVILTEGDPEQKRSEILDYFHATFTIDERLYETLKDESTFYLKGDHLRHPLIFYYGHTATFFINKLIIARVID
RRVNPRFESLFAVGVDEMSWDDLNESHYDWPTPGEVKRYRDQVRDLVDGLIKTLPLTLPITWEHPFWAIMMGIEHERIHL
ETSSVLIRQLPLDQVRRHDFWEICRESGEPAANELLPVAAGRVRLGKDEGHPLYGWDNEYGSREAKVEAFSASKFLVSNR
EYLAFVKAGGYRERGWWTEEGWNWRSFKQAEHPLFWVEREWGWGLRTMLEIIDLPWNWPVEVNYLEAKAFCNWLSAKSGK
SIRLPTEDEWYHLRDLAGVPDQPGWSRAPGNINLEYWASSCPVGRFAFGDFFDLIGNVWQWTETPIYPFHGFRVHPWYDD
FSTPTFDTRHNLIKGGSWISTGNEATRDSRYAFRRHFFQHAGFRYVESAHPVEIHEDPYETDALAAQYCDAHYGPEHFGV
PNFPRACAEICLELTRGRSRGHALDLGCAVGRASFELARGFDQVTGLDFSSRFFRLAARMQDEGFLRYALPEEGEVVSFN
ELELADLGLKEVRERVEFFQADACNLPDKFTGYDLVLAANLIDRLYSPRRFLAAIRERLNPGGLLVIASPYTWLEEYTKK
DEWLGGYREAGEPVWTIDGLSRELLPYFTPLGAPREIPFVIRETRRKFQYSIAQLTVWELK
>Mature_701_residues
MDLRKTHSVILTEGDPEQKRSEILDYFHATFTIDERLYETLKDESTFYLKGDHLRHPLIFYYGHTATFFINKLIIARVID
RRVNPRFESLFAVGVDEMSWDDLNESHYDWPTPGEVKRYRDQVRDLVDGLIKTLPLTLPITWEHPFWAIMMGIEHERIHL
ETSSVLIRQLPLDQVRRHDFWEICRESGEPAANELLPVAAGRVRLGKDEGHPLYGWDNEYGSREAKVEAFSASKFLVSNR
EYLAFVKAGGYRERGWWTEEGWNWRSFKQAEHPLFWVEREWGWGLRTMLEIIDLPWNWPVEVNYLEAKAFCNWLSAKSGK
SIRLPTEDEWYHLRDLAGVPDQPGWSRAPGNINLEYWASSCPVGRFAFGDFFDLIGNVWQWTETPIYPFHGFRVHPWYDD
FSTPTFDTRHNLIKGGSWISTGNEATRDSRYAFRRHFFQHAGFRYVESAHPVEIHEDPYETDALAAQYCDAHYGPEHFGV
PNFPRACAEICLELTRGRSRGHALDLGCAVGRASFELARGFDQVTGLDFSSRFFRLAARMQDEGFLRYALPEEGEVVSFN
ELELADLGLKEVRERVEFFQADACNLPDKFTGYDLVLAANLIDRLYSPRRFLAAIRERLNPGGLLVIASPYTWLEEYTKK
DEWLGGYREAGEPVWTIDGLSRELLPYFTPLGAPREIPFVIRETRRKFQYSIAQLTVWELK

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81718; Mature: 81718

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRKTHSVILTEGDPEQKRSEILDYFHATFTIDERLYETLKDESTFYLKGDHLRHPLIF
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEHHHHHHHHCCCCEEEEECCCCCCCEEE
YYGHTATFFINKLIIARVIDRRVNPRFESLFAVGVDEMSWDDLNESHYDWPTPGEVKRYR
EECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
DQVRDLVDGLIKTLPLTLPITWEHPFWAIMMGIEHERIHLETSSVLIRQLPLDQVRRHDF
HHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCEEEEEHHHHHHHHCCHHHHHCCHH
WEICRESGEPAANELLPVAAGRVRLGKDEGHPLYGWDNEYGSREAKVEAFSASKFLVSNR
HHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHEECCC
EYLAFVKAGGYRERGWWTEEGWNWRSFKQAEHPLFWVEREWGWGLRTMLEIIDLPWNWPV
CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCE
EVNYLEAKAFCNWLSAKSGKSIRLPTEDEWYHLRDLAGVPDQPGWSRAPGNINLEYWASS
EEEEEHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCC
CPVGRFAFGDFFDLIGNVWQWTETPIYPFHGFRVHPWYDDFSTPTFDTRHNLIKGGSWIS
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCEEE
TGNEATRDSRYAFRRHFFQHAGFRYVESAHPVEIHEDPYETDALAAQYCDAHYGPEHFGV
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PNFPRACAEICLELTRGRSRGHALDLGCAVGRASFELARGFDQVTGLDFSSRFFRLAARM
CCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHCHHHHCCCCHHHHHHHHHHHH
QDEGFLRYALPEEGEVVSFNELELADLGLKEVRERVEFFQADACNLPDKFTGYDLVLAAN
CCCCCEEEECCCCCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LIDRLYSPRRFLAAIRERLNPGGLLVIASPYTWLEEYTKKDEWLGGYREAGEPVWTIDGL
HHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCHHHHCCCHHHCCCCEEEECCC
SRELLPYFTPLGAPREIPFVIRETRRKFQYSIAQLTVWELK
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MDLRKTHSVILTEGDPEQKRSEILDYFHATFTIDERLYETLKDESTFYLKGDHLRHPLIF
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEHHHHHHHHCCCCEEEEECCCCCCCEEE
YYGHTATFFINKLIIARVIDRRVNPRFESLFAVGVDEMSWDDLNESHYDWPTPGEVKRYR
EECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
DQVRDLVDGLIKTLPLTLPITWEHPFWAIMMGIEHERIHLETSSVLIRQLPLDQVRRHDF
HHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCEEEEEHHHHHHHHCCHHHHHCCHH
WEICRESGEPAANELLPVAAGRVRLGKDEGHPLYGWDNEYGSREAKVEAFSASKFLVSNR
HHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHEECCC
EYLAFVKAGGYRERGWWTEEGWNWRSFKQAEHPLFWVEREWGWGLRTMLEIIDLPWNWPV
CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCE
EVNYLEAKAFCNWLSAKSGKSIRLPTEDEWYHLRDLAGVPDQPGWSRAPGNINLEYWASS
EEEEEHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCC
CPVGRFAFGDFFDLIGNVWQWTETPIYPFHGFRVHPWYDDFSTPTFDTRHNLIKGGSWIS
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCEEE
TGNEATRDSRYAFRRHFFQHAGFRYVESAHPVEIHEDPYETDALAAQYCDAHYGPEHFGV
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PNFPRACAEICLELTRGRSRGHALDLGCAVGRASFELARGFDQVTGLDFSSRFFRLAARM
CCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHCHHHHCCCCHHHHHHHHHHHH
QDEGFLRYALPEEGEVVSFNELELADLGLKEVRERVEFFQADACNLPDKFTGYDLVLAAN
CCCCCEEEECCCCCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LIDRLYSPRRFLAAIRERLNPGGLLVIASPYTWLEEYTKKDEWLGGYREAGEPVWTIDGL
HHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCHHHHCCCHHHCCCCEEEECCC
SRELLPYFTPLGAPREIPFVIRETRRKFQYSIAQLTVWELK
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA