| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106392
Identifier: 197106392
GI number: 197106392
Start: 3353946
End: 3355142
Strand: Direct
Name: 197106392
Synonym: PHZ_c2931
Alternate gene names: NA
Gene position: 3353946-3355142 (Clockwise)
Preceding gene: 197106391
Following gene: 197106397
Centisome position: 83.93
GC content: 73.85
Gene sequence:
>1197_bases GTGGTCCCTGAGGACCAGACTTTGACGGCTCGAAAGGACCTGTTCTCCCGCGCCCTGGCCGCAGATCCCGGGCGGCTGCA CATGGCCGCCCACAGCCACCACCTGTGGCCCGACGCCACCTACGAGGCCCACATGCAGGCCTGGGAGGACGCCGCGCGCC TGGCCGACCGCAAGTGGGACCGGGCGCTAGGCGAGGTCTACCCGCAGGCCCAGGCGCTGGTGGCCCGGGAGCTGGCCCTG CCCTCGCCCGACAGCGTGGTCTTCGCGCCCAACACCCACACGCTGCTGGCGGTGCTGGTCTCGGCGATCGAGCGGCGGCC GGCGCGGGTGCTGGCCACCGACGGGGAGTTCCACTCGTTCCGGCGGCAGGCGGCGCGCTGGGCCGAGACCGGGGAGATCG AGCTGACCCTCGTGGCGGCCGAGGCGCCGGATTTCGCCGAGCGTTTCCTGGCCGCGGCGCGCGGCGGCGGCTTCGACCTG ATCCTGGCCAGCCACGTCTTCTTCAAGAGCGGCTTCGTGTTCGACCGGGTGTGGGAGCTGGCCGAGCTGTCGAAGCCGGA AGGGCCCTGGGTGGTGGTGGACGGCTACCACGGCTTCCGGGCGATCCCGACGGACCTGTCCGCCGTCTCTGACCGGGTCT TCTACATCGCCGGCGGCTACAAGTACGCCATGGCCGGCGAAGGCGCGGCCTTCCTGCACGCCCCGCCGGGCTTCGCGCCG CGGCCGGCGCTGACCGGCTGGTACGCCGAGTTCGGCGACCTGGAGGGGCCGCCGGGCGGCGTCGGCTACGCCCGCGACGC CAGCCGGTTCCTGGGAGCCACCTTCGATCCCTCGGGCTTCTACCGGTTCGTGGCGGCCGGGCGGATGCTGGAGGCCGAGG GGCTGACCACGGCGGCGGTGGCCGACCACGTCGGCGGCCTGCAGGCGCGGCTGCTGGAGCGGATCGCCTCGGGGGCGGCC TCGGGGGCAGGCCGGCGGCTCGCGGAGGCGCAGGTGATCAATCCGCCGGACGGGCGGCCGCACGCCAGGTTCCTGGCCCT GCGCCACCCGCGGGCGCCGGCCTGGAAGCAGGCGCTGATGGAGAAAGGCGTGGTGACCGACGTGCGCGACGACGTGCTGC GGATCGGCCTCTCCGTCTACCACGACGCCGGGGACATCGACCGGGTCTGCGGGATCTGTGGAGAGGTGCTGGGGTAG
Upstream 100 bases:
>100_bases TGACCGTCGAGCGGATCATCGGCGGGCGGCCCGGCACCGGCGGGACCGAGGGGGTCGGCTACCTGGCCAAGACCCTGCGC CGGCGCTGCTTCCCCGAGCT
Downstream 100 bases:
>100_bases CGCCGCCCCTCCTCCGAGGGACAGGACCCTGTGCGGCAGGGTGGCGGGGCTTGCCGGCGGGCGCGACGGACGGGGGCCAG CCCCCTCCACCGCTTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Kynureninase; Aminotransferase; Class V Aminotransferase; Cysteine Desulfhydrase/Selenocysteine Lyase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG
Sequences:
>Translated_398_residues MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG >Mature_398_residues MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWDRALGEVYPQAQALVARELAL PSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSFRRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDL ILASHVFFKSGFVFDRVWELAELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAVADHVGGLQARLLERIASGAA SGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALMEKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG
Specific function: Unknown
COG id: COG0520
COG function: function code E; Selenocysteine lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43072; Mature: 43072
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWD CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RALGEVYPQAQALVARELALPSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSF HHHHHHCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH RRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDLILASHVFFKSGFVFDRVWEL HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH AELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP HHCCCCCCCEEEEECCCCCEECCCCHHHHCCEEEEEECCEEEEECCCCEEEEECCCCCCC RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAV CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCHHHHH ADHVGGLQARLLERIASGAASGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALM HHHHCHHHHHHHHHHHHCCCCCCCCHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHHHH EKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVPEDQTLTARKDLFSRALAADPGRLHMAAHSHHLWPDATYEAHMQAWEDAARLADRKWD CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RALGEVYPQAQALVARELALPSPDSVVFAPNTHTLLAVLVSAIERRPARVLATDGEFHSF HHHHHHCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH RRQAARWAETGEIELTLVAAEAPDFAERFLAAARGGGFDLILASHVFFKSGFVFDRVWEL HHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHH AELSKPEGPWVVVDGYHGFRAIPTDLSAVSDRVFYIAGGYKYAMAGEGAAFLHAPPGFAP HHCCCCCCCEEEEECCCCCEECCCCHHHHCCEEEEEECCEEEEECCCCEEEEECCCCCCC RPALTGWYAEFGDLEGPPGGVGYARDASRFLGATFDPSGFYRFVAAGRMLEAEGLTTAAV CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCHHHHH ADHVGGLQARLLERIASGAASGAGRRLAEAQVINPPDGRPHARFLALRHPRAPAWKQALM HHHHCHHHHHHHHHHHHCCCCCCCCHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHHHH EKGVVTDVRDDVLRIGLSVYHDAGDIDRVCGICGEVLG HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA