| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106368
Identifier: 197106368
GI number: 197106368
Start: 3322118
End: 3322738
Strand: Direct
Name: 197106368
Synonym: PHZ_c2907
Alternate gene names: NA
Gene position: 3322118-3322738 (Clockwise)
Preceding gene: 197106365
Following gene: 197106371
Centisome position: 83.13
GC content: 76.01
Gene sequence:
>621_bases ATGAGCGAGCAGCCCCTTCCGCCCGGCGCGCGGACCGCGCCGTCCACCGCCCGCAACCGCGAGCCAATCCTCGACGTGCT GAAGCGGCATCTGCCCAAGCAGGGGCTGGTGCTGGAGATCGCCGCGGGGGCGGGCGAGCACGCCCTCTACAACGCCGCGG CCCTACCCGGCCTGACCTGGCGGCCGACCGACCTGGACGAGGGGGCGCTGGCCAGCATCGAGGCCTGGCGCGAGCACGCC GGGCCGCCGAACCTTCTGCCGCCGCTGCGGCTGGACGCCGCCCGGCCCGAGGACTGGCCGGTCCGGCGGGCGGACGCGAT CGTCGCCATCAACATGGTCCACATCAGCCCCTGGGCGTCGACCCTGGGCCTGATGGCGGGCGCGGGCCGGGTGCTGCCGG CCGGCGGGGTGCTGGTGCTGTACGGCCCCTACCTGGAGGACGGCGTGGCGCCCGCCCCCAGCAACCTGGCCTTCGACGCC GACCTGAAGCGGCGCAACCCCGAGTGGGGCCTGCGGCGGGTGGCGGACGTGGCGGCGGCGGCCGCGGCGCACGGCCTCTC GCTGGCCGAGCGGGTGGAGATGCCGGCCAACAACCTGACGCTGGTGTTCCGGAAGGGCTAG
Upstream 100 bases:
>100_bases CTGCGACGCCGAAGGGTTAGCACGGTCCACCGCCCACGGCAGGCCTGGTCCGATGACCGTGGGGCTGGACCTCGCCGCCC GGCGGGGCGAAGGGGAAGGC
Downstream 100 bases:
>100_bases GCGGGCGGGTTCAGCCACTCGGTCAGGCCCTCGCGGCGGCAGACCTCGAGGAAGGCCGGGCGGGCGCGCAGGCGCGTGAC GTAGGCCGAAAGGTTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHA GPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDA DLKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG
Sequences:
>Translated_206_residues MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHA GPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDA DLKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG >Mature_205_residues SEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTWRPTDLDEGALASIEAWREHAG PPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWASTLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDAD LKRRNPEWGLRRVADVAAAAAAHGLSLAERVEMPANNLTLVFRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=202, Percent_Identity=41.5841584158416, Blast_Score=140, Evalue=6e-34, Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=38.4057971014493, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI93102401, Length=132, Percent_Identity=37.8787878787879, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71998087, Length=201, Percent_Identity=35.8208955223881, Blast_Score=134, Evalue=3e-32, Organism=Drosophila melanogaster, GI28574095, Length=203, Percent_Identity=38.423645320197, Blast_Score=145, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21901; Mature: 21770
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC RPTDLDEGALASIEAWREHAGPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWAS CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHH TLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDADLKRRNPEWGLRRVADVAAA HHHHHHCCCCEECCCCEEEEECCCHHCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHH AAAHGLSLAERVEMPANNLTLVFRKG HHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure SEQPLPPGARTAPSTARNREPILDVLKRHLPKQGLVLEIAAGAGEHALYNAAALPGLTW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC RPTDLDEGALASIEAWREHAGPPNLLPPLRLDAARPEDWPVRRADAIVAINMVHISPWAS CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHH TLGLMAGAGRVLPAGGVLVLYGPYLEDGVAPAPSNLAFDADLKRRNPEWGLRRVADVAAA HHHHHHCCCCEECCCCEEEEECCCHHCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHH AAAHGLSLAERVEMPANNLTLVFRKG HHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA