| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106341
Identifier: 197106341
GI number: 197106341
Start: 3292031
End: 3293284
Strand: Direct
Name: 197106341
Synonym: PHZ_c2880
Alternate gene names: NA
Gene position: 3292031-3293284 (Clockwise)
Preceding gene: 197106335
Following gene: 197106352
Centisome position: 82.38
GC content: 72.89
Gene sequence:
>1254_bases ATGGCCGACGTCCCGCCCGAACCGTCCCCCTCCGCCCGCGAGCTGCTGGGCCATCGGGACTACGTCTTCTTCTGGGGCTC GCGCTGGGCCGGCGCCTTCGCCGCCCAGATCCAGTCGGTGGCCATGGGCTGGCACATGTACGTGCTGGCGCGCGAGACCC GCTCGGTCGAGGAGAGCGCCTTCCTCGTCGGCATGATCGGCCTGGCCGCCTTCCTGCCGGTGCTGCTGCTCACCCTGCCG GCCGGCGAGGCCGCCGACCGCTACGACCGCCGCAAGGTGCTGCTGCTGTGCCTGACCGGCGAGATCGCCAGCGTGCTCTC CCTCGCCATCGCCACCGTCAACGGCTGGGCCTCGCCCGCCCTGCTGCTGGCCATCGCCGTGGTGTTCGGGGCAAGCCGGG CCTTCTTCGCCCCGGCCAACACCGCGCTTGGGCCCATGCTGGTGCCGCGCCGCCTGCTGCCGCGCGCCATCGCCTGGAAC TCGCTGGCCTGGCAGACCGCCTCCATCGCCGGGCCGGCGGCGGGGGGCTTCCTGCTCGCCCACGCGCCCCAGACGGCCTA CTTCACCACCTTCGGGCTGTACGCCCTGGCGATGGTGTTCGTCGCCTCGATCCGCGGGAACACCCGGCCCGAGGTGAACC CCGGCTCGCGCTGGCAGCTGATGAAGGAGGGCCTGGCCTACGTCTGGCGCCAGAAGATCGTCTTCGGCGCCATCTCCCTC GACCTGTTCGCCGTTCTGCTGGGCGGGGCGACGGCCCTGCTGCCGGTGTTCGCCCGCGACGTGCTGCACGTGGGCTCGGA GGGCTTCGGCGTGCTGCGGGCCTCGCCGGCCATCGGCGCGACCCTGGTGGCCCTGTGGCTCGCCGCCAATCCCCTGCGCC GCTACGCCGGCGGCTTCATGTTCGCGGGCGTGGCGGTGTTCGGCGCGGCCACCGTCGTGTTCGGCCTCTCCAAGGCCATG TGGCTGTCGGTGGCGGCCCTGATCGTGCTCGGCGGCGCCGACATGCTCAGCGTCTACGTGCGCCAGACCCTGGTCCAGCT CGTCACCCCCGACCAGATGCGCGGCCGGGTGGCGGCGGTCTCATCGGTGTTCATCGGCGCCTCCAACGAGCTGGGCGAGT TCGAGAGCGGCGTCGTCGCCCGCATCCTCGGCCCCGTGGGCGCGGCGGTGTTCGGCGGGACGGGCGCGATGATCGTCACC GCTCTCTGGGCCAAACTGTTCCCCGACCTGCGCCGCGCCGACCGGCTGGAGTAG
Upstream 100 bases:
>100_bases CCTCCGGGCCGTGGAAGAGAGCCGCGCACATAGGGCCGGCCGCCCCCCTCGTCAACGAGATTGCCCGCCGGCCCGACGCA GGGCAGCTTCCGCTGCGCCC
Downstream 100 bases:
>100_bases CCGCTACAGCCGGTGGACCCGCCGCCACTCCTCGGCGGTCATCTCCCAGTACAGCGAGCGCCGGGTCGTCCCGTCGGGCC GCACGGCCTCGCGCTCGCCC
Product: permease of the major facilitator superfamily
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; Facilitator Superfamily Transporter; DrugProton Antiporter; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; MFS Family Transporter; Permeases Of Facilitator Superfamily; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Integral Membrane Efflux Protein; Permease Facilitator Superfamily; Macrolide-Efflux Protein; Permease Protein; MFS Family Transporter Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MADVPPEPSPSARELLGHRDYVFFWGSRWAGAFAAQIQSVAMGWHMYVLARETRSVEESAFLVGMIGLAAFLPVLLLTLP AGEAADRYDRRKVLLLCLTGEIASVLSLAIATVNGWASPALLLAIAVVFGASRAFFAPANTALGPMLVPRRLLPRAIAWN SLAWQTASIAGPAAGGFLLAHAPQTAYFTTFGLYALAMVFVASIRGNTRPEVNPGSRWQLMKEGLAYVWRQKIVFGAISL DLFAVLLGGATALLPVFARDVLHVGSEGFGVLRASPAIGATLVALWLAANPLRRYAGGFMFAGVAVFGAATVVFGLSKAM WLSVAALIVLGGADMLSVYVRQTLVQLVTPDQMRGRVAAVSSVFIGASNELGEFESGVVARILGPVGAAVFGGTGAMIVT ALWAKLFPDLRRADRLE
Sequences:
>Translated_417_residues MADVPPEPSPSARELLGHRDYVFFWGSRWAGAFAAQIQSVAMGWHMYVLARETRSVEESAFLVGMIGLAAFLPVLLLTLP AGEAADRYDRRKVLLLCLTGEIASVLSLAIATVNGWASPALLLAIAVVFGASRAFFAPANTALGPMLVPRRLLPRAIAWN SLAWQTASIAGPAAGGFLLAHAPQTAYFTTFGLYALAMVFVASIRGNTRPEVNPGSRWQLMKEGLAYVWRQKIVFGAISL DLFAVLLGGATALLPVFARDVLHVGSEGFGVLRASPAIGATLVALWLAANPLRRYAGGFMFAGVAVFGAATVVFGLSKAM WLSVAALIVLGGADMLSVYVRQTLVQLVTPDQMRGRVAAVSSVFIGASNELGEFESGVVARILGPVGAAVFGGTGAMIVT ALWAKLFPDLRRADRLE >Mature_416_residues ADVPPEPSPSARELLGHRDYVFFWGSRWAGAFAAQIQSVAMGWHMYVLARETRSVEESAFLVGMIGLAAFLPVLLLTLPA GEAADRYDRRKVLLLCLTGEIASVLSLAIATVNGWASPALLLAIAVVFGASRAFFAPANTALGPMLVPRRLLPRAIAWNS LAWQTASIAGPAAGGFLLAHAPQTAYFTTFGLYALAMVFVASIRGNTRPEVNPGSRWQLMKEGLAYVWRQKIVFGAISLD LFAVLLGGATALLPVFARDVLHVGSEGFGVLRASPAIGATLVALWLAANPLRRYAGGFMFAGVAVFGAATVVFGLSKAMW LSVAALIVLGGADMLSVYVRQTLVQLVTPDQMRGRVAAVSSVFIGASNELGEFESGVVARILGPVGAAVFGGTGAMIVTA LWAKLFPDLRRADRLE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44146; Mature: 44015
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVPPEPSPSARELLGHRDYVFFWGSRWAGAFAAQIQSVAMGWHMYVLARETRSVEESA CCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEHHHHCHHHHH FLVGMIGLAAFLPVLLLTLPAGEAADRYDRRKVLLLCLTGEIASVLSLAIATVNGWASPA HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHCCCCHHH LLLAIAVVFGASRAFFAPANTALGPMLVPRRLLPRAIAWNSLAWQTASIAGPAAGGFLLA HHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEE HAPQTAYFTTFGLYALAMVFVASIRGNTRPEVNPGSRWQLMKEGLAYVWRQKIVFGAISL ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLFAVLLGGATALLPVFARDVLHVGSEGFGVLRASPAIGATLVALWLAANPLRRYAGGFM HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCHHH FAGVAVFGAATVVFGLSKAMWLSVAALIVLGGADMLSVYVRQTLVQLVTPDQMRGRVAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH SSVFIGASNELGEFESGVVARILGPVGAAVFGGTGAMIVTALWAKLFPDLRRADRLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADVPPEPSPSARELLGHRDYVFFWGSRWAGAFAAQIQSVAMGWHMYVLARETRSVEESA CCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEHHHHCHHHHH FLVGMIGLAAFLPVLLLTLPAGEAADRYDRRKVLLLCLTGEIASVLSLAIATVNGWASPA HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHCCCCHHH LLLAIAVVFGASRAFFAPANTALGPMLVPRRLLPRAIAWNSLAWQTASIAGPAAGGFLLA HHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEE HAPQTAYFTTFGLYALAMVFVASIRGNTRPEVNPGSRWQLMKEGLAYVWRQKIVFGAISL ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLFAVLLGGATALLPVFARDVLHVGSEGFGVLRASPAIGATLVALWLAANPLRRYAGGFM HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCHHH FAGVAVFGAATVVFGLSKAMWLSVAALIVLGGADMLSVYVRQTLVQLVTPDQMRGRVAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH SSVFIGASNELGEFESGVVARILGPVGAAVFGGTGAMIVTALWAKLFPDLRRADRLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA