Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106320

Identifier: 197106320

GI number: 197106320

Start: 3271838

End: 3272917

Strand: Direct

Name: 197106320

Synonym: PHZ_c2859

Alternate gene names: NA

Gene position: 3271838-3272917 (Clockwise)

Preceding gene: 197106319

Following gene: 197106321

Centisome position: 81.87

GC content: 75.37

Gene sequence:

>1080_bases
GTGAGCCGCAACCTCGCCGAGAAGCTGGCCGCCCAGATCGCCGCCGGCGGGCCGCTGACCGTGGCCCAGTACATGACCGC
CTGCCTGCACGACCCGCAGTTCGGCTACTACGCCACCCGGCCGGCGCTGGGCGAGGGGGGCGACTTCGTCACCGCGCCCC
TGGTCAGCCAGATGTTCGGCGAGCTGGTCGGCGTCTGGGCGGCGGTCTCCTGGGAGCTGATGGGCCGCCCCGAGACCGTG
CGGCTGGTCGAGATGGGCCCCGGGGACGGCACGCTGATGGGCGACGTCCTGCGCGCCGCGCGCATGGCCCCCGGATTCCT
AGACGCCGCCGATGTCTGGCTGGTCGAGACGTCCGAGCCGCTGAAGGCGCGCCAGCGCGAACGGCTGGGCGATGGCCCCC
GCTGGGCCGCATCCCTCGCCGAGGTTCCGGGCGAGGCGCCCCTGATCCTGTTCGCCAACGAGCTCCTCGACTGCCTGCCC
GTGCGCCAGTTCGTGCGCACCGCCACCGGCTGGGCCGAGCAGGTCGTCGGCCTCGACGACCAAGGGGGCTCCGGGGGGCG
GCTGGCCTTCGGCCGCGTCGCCACCCCCGCCGGGACCCTGCTGCCCGACGCCCGCGAAGGGGCGGTGTTCGAACAGTCCG
CCGCCCAGGAGGCGCTGGGCTCCGAGATCGGCGCCCGCGTGGTCCGCGACGGCGGCGCGGCCCTGCTGATCGACTACGGC
CGCGCCCGGCCGGGCTTCGGCGACACGCTCCAGGCCCTGCGCCGGCACGAGCGGGTCGATCCCCTCGCCTGCCCCGGCGA
GGCGGACCTCACCGTCCACGCCGACTTCCCCGCCGTGATGGCCGCCGCGGAGGGTGAGGGCGCGCAGGCCGCAATCCTCA
CCCAGGCCGAGTTCCTGGCCCGGCTCGGGATCGGCGAGCGCGCCGAGGCCCTGGTGCGCGCCCGCCCCGACAAGGCGCCG
GTCGTCGGCCGTCAGCTCAACCGCCTAGTGGCCGCCGACCAGATGGGCGAGCTCTTCAAGGCCTGCTGCCTGCACTCCCC
CGGCTGGACGCCGCCGGCTTTCGAAGAGGCCGATGCATGA

Upstream 100 bases:

>100_bases
TCTACCTGTCGATCCCGATGCTGCTGTTCGGGCTGTGGCTGATCTGGCGCGGCATGCGCGAGGAGACGCCCCCCGCCCTC
GCCCCGGCCGACAAGCCGGC

Downstream 100 bases:

>100_bases
GCGACCTCCCCCTCCTGACCTCGCCGCTGCTGGACCTGCCGGGCGTGCGCCACGCCTTCTTCACCCGCCAGGGCGGGGTC
TCGCAGGGGATCTACGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETV
RLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLP
VRQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG
RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAP
VVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA

Sequences:

>Translated_359_residues
MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETV
RLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLP
VRQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG
RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAP
VVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA
>Mature_358_residues
SRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFGELVGVWAAVSWELMGRPETVR
LVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEPLKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPV
RQFVRTATGWAEQVVGLDDQGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYGR
ARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLARLGIGERAEALVRARPDKAPV
VGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=371, Percent_Identity=34.5013477088949, Blast_Score=184, Evalue=9e-47,
Organism=Homo sapiens, GI145701028, Length=346, Percent_Identity=26.3005780346821, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193211224, Length=376, Percent_Identity=30.0531914893617, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24645885, Length=378, Percent_Identity=34.1269841269841, Blast_Score=177, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37905; Mature: 37773

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEHHHHHHHHHH
ELVGVWAAVSWELMGRPETVRLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEP
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCH
LKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPVRQFVRTATGWAEQVVGLDD
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHEECCCCCCCCHHHHHHHHHH
RLGIGERAEALVRARPDKAPVVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA
HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRNLAEKLAAQIAAGGPLTVAQYMTACLHDPQFGYYATRPALGEGGDFVTAPLVSQMFG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEHHHHHHHHHH
ELVGVWAAVSWELMGRPETVRLVEMGPGDGTLMGDVLRAARMAPGFLDAADVWLVETSEP
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCH
LKARQRERLGDGPRWAASLAEVPGEAPLILFANELLDCLPVRQFVRTATGWAEQVVGLDD
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGSGGRLAFGRVATPAGTLLPDAREGAVFEQSAAQEALGSEIGARVVRDGGAALLIDYG
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
RARPGFGDTLQALRRHERVDPLACPGEADLTVHADFPAVMAAAEGEGAQAAILTQAEFLA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHEECCCCCCCCHHHHHHHHHH
RLGIGERAEALVRARPDKAPVVGRQLNRLVAADQMGELFKACCLHSPGWTPPAFEEADA
HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA