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The map label for this gene is yijC [C]

Identifier: 197106300

GI number: 197106300

Start: 3254348

End: 3254980

Strand: Direct

Name: yijC [C]

Synonym: PHZ_c2839

Alternate gene names: 197106300

Gene position: 3254348-3254980 (Clockwise)

Preceding gene: 197106297

Following gene: 197106301

Centisome position: 81.43

GC content: 72.67

Gene sequence:

>633_bases
ATGAGAGAAGCTCACAGCGCCGAGCCCCGGCCCTACCACCACGGCGACCTCCGCCGCGCGCTGGTCGAGGCCGCCCGCCG
GCTGCTGGAATCCGAGGGGCCCAGCGCCCTCTCTCTCCGGGCGGTGGCCCGCGAGGCCGGCGTCAGCCCGGCCGCCCCCT
ACCACCACTTCAAGGACAAGTCCGAGCTGCTGGACGCGGTGGCCCACGAGGGCTGGGAGATGCTGCACGCGGCGATGTCC
GAGGCCAAGGGCGGCGTGGAAGGCCGCCAGCAGCTCACCGCCCTGGGCATCGCCTACGTCTGCTTCGCGCGCGAGCACCC
GGCCCTCTACCGGGTGATGTACGACGCCGCGCGCGACAAGGAGGCCCTGCCGATCGAGACCCACGACGGGTCGGGGGACA
GCGCCTACTGCATGGTGCGCGACACCATGATCGAGCACGGCGCCGACCCGCAGGCCGGCCCGGACCTGGAGCTCGCCACC
ATCGCCTCCTGGTGCGCCGCCCACGGCCTGGCCGAGATGGCCGGCTTCAAGCAGTTCGAGCCGTTCAAGGCCCAGCTCGG
CGGCGAGCGGGCGTTCTTCGAGGCGGTGCTGAACCACATGGGCCTGTTCCCCTCGGCGCACCGCGACTGCTAG

Upstream 100 bases:

>100_bases
ACGGGGGCGTTTGTTATTTGAACAACGCTAAGATAACGTCGGTCGCCCCGGAGTCAAGGCGATCTTTACACCGTCCAGAT
GCAGTTTTATGGTGGAGCCG

Downstream 100 bases:

>100_bases
ACGCCGGGCGGTGTTCGTCACCCGCTTCGCCCCCTCGCCGACCGGCCTGCTGCACCGCGGCCACGCGTTCTCGGCGCTGA
CCGCCCACGAGGCCGCGCGC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MREAHSAEPRPYHHGDLRRALVEAARRLLESEGPSALSLRAVAREAGVSPAAPYHHFKDKSELLDAVAHEGWEMLHAAMS
EAKGGVEGRQQLTALGIAYVCFAREHPALYRVMYDAARDKEALPIETHDGSGDSAYCMVRDTMIEHGADPQAGPDLELAT
IASWCAAHGLAEMAGFKQFEPFKAQLGGERAFFEAVLNHMGLFPSAHRDC

Sequences:

>Translated_210_residues
MREAHSAEPRPYHHGDLRRALVEAARRLLESEGPSALSLRAVAREAGVSPAAPYHHFKDKSELLDAVAHEGWEMLHAAMS
EAKGGVEGRQQLTALGIAYVCFAREHPALYRVMYDAARDKEALPIETHDGSGDSAYCMVRDTMIEHGADPQAGPDLELAT
IASWCAAHGLAEMAGFKQFEPFKAQLGGERAFFEAVLNHMGLFPSAHRDC
>Mature_210_residues
MREAHSAEPRPYHHGDLRRALVEAARRLLESEGPSALSLRAVAREAGVSPAAPYHHFKDKSELLDAVAHEGWEMLHAAMS
EAKGGVEGRQQLTALGIAYVCFAREHPALYRVMYDAARDKEALPIETHDGSGDSAYCMVRDTMIEHGADPQAGPDLELAT
IASWCAAHGLAEMAGFKQFEPFKAQLGGERAFFEAVLNHMGLFPSAHRDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22961; Mature: 22961

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREAHSAEPRPYHHGDLRRALVEAARRLLESEGPSALSLRAVAREAGVSPAAPYHHFKDK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCH
SELLDAVAHEGWEMLHAAMSEAKGGVEGRQQLTALGIAYVCFAREHPALYRVMYDAARDK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
EALPIETHDGSGDSAYCMVRDTMIEHGADPQAGPDLELATIASWCAAHGLAEMAGFKQFE
CCCCEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PFKAQLGGERAFFEAVLNHMGLFPSAHRDC
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MREAHSAEPRPYHHGDLRRALVEAARRLLESEGPSALSLRAVAREAGVSPAAPYHHFKDK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCH
SELLDAVAHEGWEMLHAAMSEAKGGVEGRQQLTALGIAYVCFAREHPALYRVMYDAARDK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
EALPIETHDGSGDSAYCMVRDTMIEHGADPQAGPDLELATIASWCAAHGLAEMAGFKQFE
CCCCEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PFKAQLGGERAFFEAVLNHMGLFPSAHRDC
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA