| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is proP [H]
Identifier: 197106281
GI number: 197106281
Start: 3231994
End: 3233667
Strand: Direct
Name: proP [H]
Synonym: PHZ_c2820
Alternate gene names: 197106281
Gene position: 3231994-3233667 (Clockwise)
Preceding gene: 197106280
Following gene: 197106282
Centisome position: 80.88
GC content: 67.62
Gene sequence:
>1674_bases ATGTCCAACGCGACCTATCCCGCGTCGGCGGCCGGCGACGAACACACGGTCGATCGGGACGATCGGCTGGTGATCGGCGC CTCGTCCGTCGGCACGGTCTTCGAGTGGTACGACTTCTATCTGTACGGATCGCTCGCCAGCTACATCACCACCCACTTCT TCTCCGGCGTGAACGAGACCACGGGCTACATCTTCGCCCTGATGGCCTTCGCCGCCGGCTTCGCCGTCCGGCCCTTCGGG GCGCTGGTGTTCGGCCGTCTGGGCGACCTGTGGGGCCGCAAGAACACCTTCCTCGTGACCATGCTGCTGATGGGCCTGTC GACCTTCGCGGTGGGCCTCTTGCCCTCGTACGCCCAGATCGGCGTCGCAGCGCCCGCCATCCTGATCGGCCTGCGGCTGC TGCAGGGCCTGGCGCTCGGCGGCGAGTACGGCGGGGCCGCGACCTACGTCGCCGAGCACGCGCCGCACGGCAAGCGCGGC CTCTACACCAGCTGGATCCAGACGACCGCCACCATGGGCCTGTTCATGAGCCTGGCGATCATCCTGGCCACGCGCACCGG CATGGGCGAGGAGGCGTTCGCCGACTGGGGCTGGCGCGTGCCGTTCCTGGTCTCGATCTTCCTGCTGGCCGTCTCGATGT GGATCCGGCTGAAGCTGCAGGAGAGCCCCGCGTTCCAGCGCATGAAGGCCGAGGGCAAGGGCACCACCCAGCCCCTCAAG GAGAGCTTCGCCCGCTGGGGGAACCTGAAGATCGTCGTCCTGGCGCTGGTGGGCCTGACCGCCGGCCAGGCCGTGGTCTG GTACACCGGCCAGTTCTACGCCCTGTTCTTCCTCGAGAAGATGCTGAAGGTCGACGGGGCGCTGACCAACACCCTAGTGG CCCTGGCGCTGCTGATCGGCACGCCGTTCTTCATCTTCTTCGGCTGGCTGTCCGACAAGATCGGGCGGAAGAAGATCATC ATGGCCGGCTGCCTGATCGCGGCCCTGACCTACTTCCCGCTGTTCAAGGCGCTGACCTGGGCCGCGAACCCGGACCTCGC CCGCGCCGCGGCCACCAGCCCGGTGACGGTCGTCGCCGACCCGGCCGACTGCTCGGTCCAGTTCGACCCCGTCGGCAAGA CGGTGTTCAACAAGAGCTGCGACATCGCCAAGTCGTACTTGGCCAAGGCCGGCGTCACCTACCAGAACGAGGCGGCCCCG GCCGGCTCGATCGCCCAGGTGCGGGTCGGCGACGAAGTCATCGCCTCGTTCCGGGGCGAGGCCCTGCCCAAGGCCGATTT CGCGGCCCAGAAAGGCGCCTGGGAAAAGAACATGGGCGCGGTGCTGAGCGCCGCGGGCTACCCGGCCAAGGCGGACTCCG CCAAGGTCAACAAGGTGGCCGTGGTCGGCATCCTGACCCTGCTCGTGATCTACGTGACCATGGTCTACGGCCCGATCGCC GCCATGCTGGTGGAGCTGTTCCCCACCCGGATCCGCTACACCTCGATGAGCCTGCCCTACCACATCGGCAACGGCTGGTT CGGCGGCTTCCTGCCCACCACGGCGTTCGCCATGGTCGCGGCCACGGGCAACATCTACTACGGCCTCTGGTACCCGGTGG TGGTGGCCGCGGTCACCTTCGTGATCGGCGTGCTGTTCATCCGGGAGACCAAAGACGTCGACATCCACGCCTGA
Upstream 100 bases:
>100_bases CGGGCAAGGCCAAGCGTGCAGGGTTCGGCTTTGAGGGCGGAGGGGGGACCTCCGTCGGCATGGCGGCCGTCCGCAAGCGA CGGCGCCCTGGGAGGAGCCT
Downstream 100 bases:
>100_bases GTAAGCCCGTCTTACCTCCCCTGAGGCGTGCGCGGGCGGCCGAAAGGCCGCCCGCAAGCTTTTCTGCGACCTTCGTCGGC TTGCGGAACGGCCGCGGCGG
Product: major facilitator family transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSNATYPASAAGDEHTVDRDDRLVIGASSVGTVFEWYDFYLYGSLASYITTHFFSGVNETTGYIFALMAFAAGFAVRPFG ALVFGRLGDLWGRKNTFLVTMLLMGLSTFAVGLLPSYAQIGVAAPAILIGLRLLQGLALGGEYGGAATYVAEHAPHGKRG LYTSWIQTTATMGLFMSLAIILATRTGMGEEAFADWGWRVPFLVSIFLLAVSMWIRLKLQESPAFQRMKAEGKGTTQPLK ESFARWGNLKIVVLALVGLTAGQAVVWYTGQFYALFFLEKMLKVDGALTNTLVALALLIGTPFFIFFGWLSDKIGRKKII MAGCLIAALTYFPLFKALTWAANPDLARAAATSPVTVVADPADCSVQFDPVGKTVFNKSCDIAKSYLAKAGVTYQNEAAP AGSIAQVRVGDEVIASFRGEALPKADFAAQKGAWEKNMGAVLSAAGYPAKADSAKVNKVAVVGILTLLVIYVTMVYGPIA AMLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGNIYYGLWYPVVVAAVTFVIGVLFIRETKDVDIHA
Sequences:
>Translated_557_residues MSNATYPASAAGDEHTVDRDDRLVIGASSVGTVFEWYDFYLYGSLASYITTHFFSGVNETTGYIFALMAFAAGFAVRPFG ALVFGRLGDLWGRKNTFLVTMLLMGLSTFAVGLLPSYAQIGVAAPAILIGLRLLQGLALGGEYGGAATYVAEHAPHGKRG LYTSWIQTTATMGLFMSLAIILATRTGMGEEAFADWGWRVPFLVSIFLLAVSMWIRLKLQESPAFQRMKAEGKGTTQPLK ESFARWGNLKIVVLALVGLTAGQAVVWYTGQFYALFFLEKMLKVDGALTNTLVALALLIGTPFFIFFGWLSDKIGRKKII MAGCLIAALTYFPLFKALTWAANPDLARAAATSPVTVVADPADCSVQFDPVGKTVFNKSCDIAKSYLAKAGVTYQNEAAP AGSIAQVRVGDEVIASFRGEALPKADFAAQKGAWEKNMGAVLSAAGYPAKADSAKVNKVAVVGILTLLVIYVTMVYGPIA AMLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGNIYYGLWYPVVVAAVTFVIGVLFIRETKDVDIHA >Mature_556_residues SNATYPASAAGDEHTVDRDDRLVIGASSVGTVFEWYDFYLYGSLASYITTHFFSGVNETTGYIFALMAFAAGFAVRPFGA LVFGRLGDLWGRKNTFLVTMLLMGLSTFAVGLLPSYAQIGVAAPAILIGLRLLQGLALGGEYGGAATYVAEHAPHGKRGL YTSWIQTTATMGLFMSLAIILATRTGMGEEAFADWGWRVPFLVSIFLLAVSMWIRLKLQESPAFQRMKAEGKGTTQPLKE SFARWGNLKIVVLALVGLTAGQAVVWYTGQFYALFFLEKMLKVDGALTNTLVALALLIGTPFFIFFGWLSDKIGRKKIIM AGCLIAALTYFPLFKALTWAANPDLARAAATSPVTVVADPADCSVQFDPVGKTVFNKSCDIAKSYLAKAGVTYQNEAAPA GSIAQVRVGDEVIASFRGEALPKADFAAQKGAWEKNMGAVLSAAGYPAKADSAKVNKVAVVGILTLLVIYVTMVYGPIAA MLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGNIYYGLWYPVVVAAVTFVIGVLFIRETKDVDIHA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=329, Percent_Identity=33.7386018237082, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1788292, Length=336, Percent_Identity=35.1190476190476, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1788942, Length=344, Percent_Identity=32.2674418604651, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1789941, Length=343, Percent_Identity=34.9854227405248, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI87082231, Length=247, Percent_Identity=25.1012145748988, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87082404, Length=325, Percent_Identity=24, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59924; Mature: 59792
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNATYPASAAGDEHTVDRDDRLVIGASSVGTVFEWYDFYLYGSLASYITTHFFSGVNET CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TGYIFALMAFAAGFAVRPFGALVFGRLGDLWGRKNTFLVTMLLMGLSTFAVGLLPSYAQI HHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH GVAAPAILIGLRLLQGLALGGEYGGAATYVAEHAPHGKRGLYTSWIQTTATMGLFMSLAI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ILATRTGMGEEAFADWGWRVPFLVSIFLLAVSMWIRLKLQESPAFQRMKAEGKGTTQPLK HHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCHHHH ESFARWGNLKIVVLALVGLTAGQAVVWYTGQFYALFFLEKMLKVDGALTNTLVALALLIG HHHHHHCCCCEEEHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TPFFIFFGWLSDKIGRKKIIMAGCLIAALTYFPLFKALTWAANPDLARAAATSPVTVVAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC PADCSVQFDPVGKTVFNKSCDIAKSYLAKAGVTYQNEAAPAGSIAQVRVGDEVIASFRGE CCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCC ALPKADFAAQKGAWEKNMGAVLSAAGYPAKADSAKVNKVAVVGILTLLVIYVTMVYGPIA CCCCHHHHHHCCCCHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AMLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGNIYYGLWYPVVVAAVTF HHHHHHHHHHHEEEEECCCEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH VIGVLFIRETKDVDIHA HHHHHHHCCCCCCCCCC >Mature Secondary Structure SNATYPASAAGDEHTVDRDDRLVIGASSVGTVFEWYDFYLYGSLASYITTHFFSGVNET CCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TGYIFALMAFAAGFAVRPFGALVFGRLGDLWGRKNTFLVTMLLMGLSTFAVGLLPSYAQI HHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH GVAAPAILIGLRLLQGLALGGEYGGAATYVAEHAPHGKRGLYTSWIQTTATMGLFMSLAI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ILATRTGMGEEAFADWGWRVPFLVSIFLLAVSMWIRLKLQESPAFQRMKAEGKGTTQPLK HHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCHHHH ESFARWGNLKIVVLALVGLTAGQAVVWYTGQFYALFFLEKMLKVDGALTNTLVALALLIG HHHHHHCCCCEEEHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TPFFIFFGWLSDKIGRKKIIMAGCLIAALTYFPLFKALTWAANPDLARAAATSPVTVVAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC PADCSVQFDPVGKTVFNKSCDIAKSYLAKAGVTYQNEAAPAGSIAQVRVGDEVIASFRGE CCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCC ALPKADFAAQKGAWEKNMGAVLSAAGYPAKADSAKVNKVAVVGILTLLVIYVTMVYGPIA CCCCHHHHHHCCCCHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AMLVELFPTRIRYTSMSLPYHIGNGWFGGFLPTTAFAMVAATGNIYYGLWYPVVVAAVTF HHHHHHHHHHHEEEEECCCEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH VIGVLFIRETKDVDIHA HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]