| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106252
Identifier: 197106252
GI number: 197106252
Start: 3202218
End: 3202925
Strand: Direct
Name: 197106252
Synonym: PHZ_c2791
Alternate gene names: NA
Gene position: 3202218-3202925 (Clockwise)
Preceding gene: 197106251
Following gene: 197106253
Centisome position: 80.13
GC content: 71.89
Gene sequence:
>708_bases ATGCAGAGGCCCGTCCCCGCGTTGCAGAACAGTCTGCTCGAAGCGCTTCCGGCTGACGATTACGCGCTGCTGGCGCCGCA CCTGGCCCAGGTGGAGCTGGAGCGCGGCCGGCTGCTCTACGACCCGGGCGATCCCATCGAGTCCGTCTACTTCCCGCACG ACGGGGTGATCTCGCTGATGACCCTGATGGACAACGGCGCGGCCATCGAAAGCGCCACCATCGGGCCGGAGGGCGCCCTG GGCCTGATGGCCGCCGTCGCCCCGCGCCAGTCGCTGTCGCGCGCCCTCGTCCAGACGCCGCTGCGCGCCGCCCGGATCAG CGCCGAGCGGCTGCACGAGGCCTGGAGCCGCAGCGCGCGGCTGAAGGACCTGGTGGACCGGCACACCGAGGCGCTGTTCG GCCACGCCATCCAGTCGGTGGCCTGCAACGCCCTGCACTCGGTGGAGGCGCGGTTCTGCCGCTGGCTGCTGACCTGCCAC GACCGGATCTCCACCGACACCGTGGCCCTGACCCAGGAGTTCCTGGCCGACATGCTGGGCGTGCAGCGCACGACGGTCAC CGCCGTGGCCCGCTCGCTGCAGGAGAAGGGCCTGATCCGCTACCGCCGCGGCGTCGTGGACATCCTGGACCGCGGCGGGC TCGAGACCCTGGCCTGCGAGTGCTACGGCGTGATCCGCCGCAACTACCACCGCCTGCTGCCGGGGTGA
Upstream 100 bases:
>100_bases TCCACCGCCAACCATAGGCAGTGTCGAGTTCACGACAGTGTTGCGGCGTGCGCATCGATAACTTGAAACCCCCGCCGCAC GGCGGCGTTTCAAATCCCCG
Downstream 100 bases:
>100_bases TCCCGCCCCGCCCTTGAGCGGGGGCGCGGGGGGCGGGGAGCGGCCGATACCTCCGGTTTCGATTGCGCCGGGCAGGATTT CCCTCTTTCTTTCGGCGCTT
Product: transcriptional regulator(cAMP-binding)
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG
Sequences:
>Translated_235_residues MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG >Mature_235_residues MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLMTLMDNGAAIESATIGPEGAL GLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSARLKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCH DRISTDTVALTQEFLADMLGVQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25885; Mature: 25885
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLM CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCHHHHHH TLMDNGAAIESATIGPEGALGLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSAR HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCHDRISTDTVALTQEFLADMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC VQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQRPVPALQNSLLEALPADDYALLAPHLAQVELERGRLLYDPGDPIESVYFPHDGVISLM CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCHHHHHH TLMDNGAAIESATIGPEGALGLMAAVAPRQSLSRALVQTPLRAARISAERLHEAWSRSAR HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLVDRHTEALFGHAIQSVACNALHSVEARFCRWLLTCHDRISTDTVALTQEFLADMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC VQRTTVTAVARSLQEKGLIRYRRGVVDILDRGGLETLACECYGVIRRNYHRLLPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA