Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106210

Identifier: 197106210

GI number: 197106210

Start: 3153932

End: 3154513

Strand: Direct

Name: 197106210

Synonym: PHZ_c2749

Alternate gene names: NA

Gene position: 3153932-3154513 (Clockwise)

Preceding gene: 197106208

Following gene: 197106211

Centisome position: 78.92

GC content: 75.26

Gene sequence:

>582_bases
GTGGCCCGGAACTACACCCTGAAACGGCGCGCGGAGCAGCAGGCGCAGACCCGGCGCCGGCTCGTCGAGGCCGCGGTGGA
CCTGCACGGCGAGCTTGGGCCGGCGCGGACCAGCCTGAGCATGGTGGCCGAACGGGCGGGCGTTCAGCGCAACACGCTCT
ACGCCCACTTCCCAGACGAGCGCAGCCTGCTGGTGGCCTGTTCGGCCCTGTCGCTGGAGCGCGACCCGCCCCCCGACGCC
TCGGGCTGGAGCGACATCGCCGACGCCGGCGAGCGGCTGCGGCAGGGGCTGGGCGAGGTCTACGGCTGGTACGGCCGCAC
CGCCCAGTTGATCGGCTGCGTGCTGCGCGACGCCGAGCACCACGATCTGACGCGGGAGATCACCGAACTGCGCCTGGGGC
CGGTGATCGCCGGTTGGCGCGAGGTGCTGGGGGCCGATCTGGCGGGACCCCGGAGGGCCGTGCTCGAGCTGGCGCTGAGC
TTCCATGGCTGGCGCGCGCTCGCCCGCGAGGGCGGGTTGGACGACCCCGCCGCGGCCGCCGCGGCCATGGCGCGGGCGAT
CGAGGCGCAGCCCGCAGGCTAG

Upstream 100 bases:

>100_bases
CTCCTGCTGGACCGGGCGAGATTTTCACACTACATAACCGTGTAATGAAAAACCGCGGCGAGGTCAATTTCGCTGCACAG
TCCAGTACGGCGAAACAGGC

Downstream 100 bases:

>100_bases
GAAGGCGGCCGCCGCGGCCGGTTTCACCTGCAACTTTTTTGCGGCGGAACGCCCTATTGCGCCGCCATCCGCAATGACTT
AGGTCGCCATCTCCGGTTCC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MARNYTLKRRAEQQAQTRRRLVEAAVDLHGELGPARTSLSMVAERAGVQRNTLYAHFPDERSLLVACSALSLERDPPPDA
SGWSDIADAGERLRQGLGEVYGWYGRTAQLIGCVLRDAEHHDLTREITELRLGPVIAGWREVLGADLAGPRRAVLELALS
FHGWRALAREGGLDDPAAAAAAMARAIEAQPAG

Sequences:

>Translated_193_residues
MARNYTLKRRAEQQAQTRRRLVEAAVDLHGELGPARTSLSMVAERAGVQRNTLYAHFPDERSLLVACSALSLERDPPPDA
SGWSDIADAGERLRQGLGEVYGWYGRTAQLIGCVLRDAEHHDLTREITELRLGPVIAGWREVLGADLAGPRRAVLELALS
FHGWRALAREGGLDDPAAAAAAMARAIEAQPAG
>Mature_192_residues
ARNYTLKRRAEQQAQTRRRLVEAAVDLHGELGPARTSLSMVAERAGVQRNTLYAHFPDERSLLVACSALSLERDPPPDAS
GWSDIADAGERLRQGLGEVYGWYGRTAQLIGCVLRDAEHHDLTREITELRLGPVIAGWREVLGADLAGPRRAVLELALSF
HGWRALAREGGLDDPAAAAAAMARAIEAQPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20968; Mature: 20837

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNYTLKRRAEQQAQTRRRLVEAAVDLHGELGPARTSLSMVAERAGVQRNTLYAHFPDE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCC
RSLLVACSALSLERDPPPDASGWSDIADAGERLRQGLGEVYGWYGRTAQLIGCVLRDAEH
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH
HDLTREITELRLGPVIAGWREVLGADLAGPRRAVLELALSFHGWRALAREGGLDDPAAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AAMARAIEAQPAG
HHHHHHHHCCCCC
>Mature Secondary Structure 
ARNYTLKRRAEQQAQTRRRLVEAAVDLHGELGPARTSLSMVAERAGVQRNTLYAHFPDE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCC
RSLLVACSALSLERDPPPDASGWSDIADAGERLRQGLGEVYGWYGRTAQLIGCVLRDAEH
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH
HDLTREITELRLGPVIAGWREVLGADLAGPRRAVLELALSFHGWRALAREGGLDDPAAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AAMARAIEAQPAG
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA