| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ygjT [C]
Identifier: 197106169
GI number: 197106169
Start: 3103920
End: 3104903
Strand: Direct
Name: ygjT [C]
Synonym: PHZ_c2708
Alternate gene names: 197106169
Gene position: 3103920-3104903 (Clockwise)
Preceding gene: 197106165
Following gene: 197106172
Centisome position: 77.67
GC content: 68.8
Gene sequence:
>984_bases ATGGACTGGCTGACGCAGATGGCGCTCGGCAAGCCCGTATGGATGTGGGCCGCCTTCCTGGCGGTGGTGCTCGCACTCCT CGTTCTCGACCTGGGCGTGCTGCACCGGAAGCAGAAGGAGATCGGCGTCCGCGAGAGCCTGCTGCTCTCGGCCGGCTACA TCACCGCCGGCCTTGGCTTCGGGGTCTGGGTGTGGAGCGAGCTCGGCCGGCAGGCGGGGCTCGAATACGTGACCGGCTTC CTGGTCGAGAAGAGCCTGGCGATGGACAATGTCTTCGTCATCGCCACCATCTTCGCCGCCTTCGCCGTGCCGCGCGCCTA CCAGCACCGCGTGCTGTTCTGGGGCATCCTCGGCGTCATCGTGCTGCGGGCGATCATGATCGGGGTGGGCGCGGCCCTGG TCGCCAACTTCGAATGGATCCTGCTCGTCTTCGCCGCCTTCCTCGTGGTGGTGGGCGCCCGGATGCTGTTCTCCAGCCAC GAGCCCGCCGACCCGCGGGACAACGCGGTCTACCGCTGGCTGGCGGGCCACCTGCGCCTGACCCCTGACTTCGAGGGCTC GCGCTTCTTCGTCAGGCGCACGCCGCCGGGCGGCTCGAAGGCCGTGCTCTACGCCACCCCGCTGTTCCTGGCGCTGGTGA TGATCGAGCTGGCCGACGTCGTCTTCGCGGTCGACTCGGTGCCGGCGATCTTCGCGATCACCACCGATCCCTACATCGTC TACACGTCGAACATCTTCGCCATCCTGGGCCTGCGCGCCCTCTATTTCGCCCTGGCGGCGGTGACGGCGCGGTTCGCCTA TCTGAAGCACGCCCTCGCGCTGCTGCTGATCTTCATCGGCGGCAAGGTGTTCGTGGCCGAGGCGGCGGGCTGGGAGAAGT TCCCCGCACCGGCGTCCCTGGGGATCACCGCGGCGATCCTGGCGGGCGGGATCATCTACTCGCTGTGGCGGACGGAACGC CGCCCGCCCGAGCCGGCGGCCTGA
Upstream 100 bases:
>100_bases TCGAGAGCGGCCTCGTCCCCGTCCGCATCTGATCCGACCCCAAGCCCGACTTCGGGGCGGCGGCTAGCCACGCCGCCCCG CCTTTTTTCCGGAGGTCCGA
Downstream 100 bases:
>100_bases TCTGCTCGAAGGTGCATTGCCGGGGCGCCTTGTCGGGCCGCCAGCGCACCAGCTTCGTCCCGTGCCGGAAGCGCTCGCCG GTCACCTGGTCGTAGCGGAC
Product: tellurium resistance membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDWLTQMALGKPVWMWAAFLAVVLALLVLDLGVLHRKQKEIGVRESLLLSAGYITAGLGFGVWVWSELGRQAGLEYVTGF LVEKSLAMDNVFVIATIFAAFAVPRAYQHRVLFWGILGVIVLRAIMIGVGAALVANFEWILLVFAAFLVVVGARMLFSSH EPADPRDNAVYRWLAGHLRLTPDFEGSRFFVRRTPPGGSKAVLYATPLFLALVMIELADVVFAVDSVPAIFAITTDPYIV YTSNIFAILGLRALYFALAAVTARFAYLKHALALLLIFIGGKVFVAEAAGWEKFPAPASLGITAAILAGGIIYSLWRTER RPPEPAA
Sequences:
>Translated_327_residues MDWLTQMALGKPVWMWAAFLAVVLALLVLDLGVLHRKQKEIGVRESLLLSAGYITAGLGFGVWVWSELGRQAGLEYVTGF LVEKSLAMDNVFVIATIFAAFAVPRAYQHRVLFWGILGVIVLRAIMIGVGAALVANFEWILLVFAAFLVVVGARMLFSSH EPADPRDNAVYRWLAGHLRLTPDFEGSRFFVRRTPPGGSKAVLYATPLFLALVMIELADVVFAVDSVPAIFAITTDPYIV YTSNIFAILGLRALYFALAAVTARFAYLKHALALLLIFIGGKVFVAEAAGWEKFPAPASLGITAAILAGGIIYSLWRTER RPPEPAA >Mature_327_residues MDWLTQMALGKPVWMWAAFLAVVLALLVLDLGVLHRKQKEIGVRESLLLSAGYITAGLGFGVWVWSELGRQAGLEYVTGF LVEKSLAMDNVFVIATIFAAFAVPRAYQHRVLFWGILGVIVLRAIMIGVGAALVANFEWILLVFAAFLVVVGARMLFSSH EPADPRDNAVYRWLAGHLRLTPDFEGSRFFVRRTPPGGSKAVLYATPLFLALVMIELADVVFAVDSVPAIFAITTDPYIV YTSNIFAILGLRALYFALAAVTARFAYLKHALALLLIFIGGKVFVAEAAGWEKFPAPASLGITAAILAGGIIYSLWRTER RPPEPAA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=326, Percent_Identity=42.638036809816, Blast_Score=244, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35714; Mature: 35714
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWLTQMALGKPVWMWAAFLAVVLALLVLDLGVLHRKQKEIGVRESLLLSAGYITAGLGF CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHH GVWVWSELGRQAGLEYVTGFLVEKSLAMDNVFVIATIFAAFAVPRAYQHRVLFWGILGVI HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRAIMIGVGAALVANFEWILLVFAAFLVVVGARMLFSSHEPADPRDNAVYRWLAGHLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEE TPDFEGSRFFVRRTPPGGSKAVLYATPLFLALVMIELADVVFAVDSVPAIFAITTDPYIV CCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE YTSNIFAILGLRALYFALAAVTARFAYLKHALALLLIFIGGKVFVAEAAGWEKFPAPASL EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH GITAAILAGGIIYSLWRTERRPPEPAA HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDWLTQMALGKPVWMWAAFLAVVLALLVLDLGVLHRKQKEIGVRESLLLSAGYITAGLGF CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHH GVWVWSELGRQAGLEYVTGFLVEKSLAMDNVFVIATIFAAFAVPRAYQHRVLFWGILGVI HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRAIMIGVGAALVANFEWILLVFAAFLVVVGARMLFSSHEPADPRDNAVYRWLAGHLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEE TPDFEGSRFFVRRTPPGGSKAVLYATPLFLALVMIELADVVFAVDSVPAIFAITTDPYIV CCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE YTSNIFAILGLRALYFALAAVTARFAYLKHALALLLIFIGGKVFVAEAAGWEKFPAPASL EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH GITAAILAGGIIYSLWRTERRPPEPAA HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA