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The map label for this gene is yfhM [H]

Identifier: 197106078

GI number: 197106078

Start: 3006717

End: 3007622

Strand: Direct

Name: yfhM [H]

Synonym: PHZ_c2617

Alternate gene names: 197106078

Gene position: 3006717-3007622 (Clockwise)

Preceding gene: 197106076

Following gene: 197106079

Centisome position: 75.24

GC content: 70.64

Gene sequence:

>906_bases
ATGATCCGCACCGCCGTCTTGGCCCTGGCCGCCGCGTTCGCCCTGTCGAGCGCCGCCTGGGCCGCGCCCCAGGACCGCTA
CGCCGCGAACGGTGCGGTGAAGATCCACTACGTGGTCGAGGGCGAAGGCCCCCTCGTCGTGCTGCTTCACGGCTTCCCCG
ACTATTGGGCCACCTGGAAGCCGTTGATGGCCGAGCTCAACAGAGCCGGCTGGCGCACCGCCGCCCTCGACCTGCGCGGC
TACAACCTCTCGGACAAGCCGGACGGCGTCGCCGCCTACGCCATGCCGAACCTGATCGGCGACGTGGCCGCGGTGATCGC
CGCGGAGGGCGCGAAGGACGCGGTGGTGATCGGGCACGACTGGGGCGCGGCCATCGCCTGGCAGGTGGCCATGAACCGCC
CGGACCTGGTGAACCGGCTGGTGATCCTGAGCGTGCCCCACCCGGCCGGCTTCGCCCGCGAGATGGCGACCAACGCCGAG
CAGCAGAAGAACAGCCAGTACGCCCGCAACTTCCAGCAGCCCGGGTTCGAGAAGACCCTGACCGCCGAGGGGCTCGCCGG
CTGGGTGAAGGACGCGGCCGAGAAGCCGGGCTATGTCGAGGCGTTCAAGCGTTCGGACTTCGCCGCCATGCTGAACTACT
ACCGCGCCAACTACCCCAGCGGGACCGGCGCGGCGACCGCCGCTCCGCCCTCCATGGCGACGGCGGCGCGGATCAAGGCT
CCGACCCTCGTCATCCATGGCATGAAGGACACGGCCCTGAACGCGGCGGGCCACGCCGGGACCTGGGACCACGTGGACGC
CGACACCACGATCGTCATGTTCCCCCAGGCCGCCCACTTCGTTCAGCACGACGCGAAGGACCAGGTGAACCGCACGGTCA
AGGGCTGGCTCGCCGCCCGCCGCTGA

Upstream 100 bases:

>100_bases
GGTCGACGACAAGAACTAGGCCCCTGCCCGGCCCAGCAACCGGCTTCCCCTTTTCGGCGGCGGGATTAATCTACGCCGTA
AACGAAAAGGGGAGGCTTCC

Downstream 100 bases:

>100_bases
CAAAGATCAAACGGGAGAGGCCCGCCGAGGCGTAGCTTCCTTGTCCATGAGCTTTGCAAACACCCGGGCCGGCTACGGCT
GGGCCGCCATCGCCCTCCAC

Product: hydrolase, alpha/beta fold family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIRTAVLALAAAFALSSAAWAAPQDRYAANGAVKIHYVVEGEGPLVVLLHGFPDYWATWKPLMAELNRAGWRTAALDLRG
YNLSDKPDGVAAYAMPNLIGDVAAVIAAEGAKDAVVIGHDWGAAIAWQVAMNRPDLVNRLVILSVPHPAGFAREMATNAE
QQKNSQYARNFQQPGFEKTLTAEGLAGWVKDAAEKPGYVEAFKRSDFAAMLNYYRANYPSGTGAATAAPPSMATAARIKA
PTLVIHGMKDTALNAAGHAGTWDHVDADTTIVMFPQAAHFVQHDAKDQVNRTVKGWLAARR

Sequences:

>Translated_301_residues
MIRTAVLALAAAFALSSAAWAAPQDRYAANGAVKIHYVVEGEGPLVVLLHGFPDYWATWKPLMAELNRAGWRTAALDLRG
YNLSDKPDGVAAYAMPNLIGDVAAVIAAEGAKDAVVIGHDWGAAIAWQVAMNRPDLVNRLVILSVPHPAGFAREMATNAE
QQKNSQYARNFQQPGFEKTLTAEGLAGWVKDAAEKPGYVEAFKRSDFAAMLNYYRANYPSGTGAATAAPPSMATAARIKA
PTLVIHGMKDTALNAAGHAGTWDHVDADTTIVMFPQAAHFVQHDAKDQVNRTVKGWLAARR
>Mature_301_residues
MIRTAVLALAAAFALSSAAWAAPQDRYAANGAVKIHYVVEGEGPLVVLLHGFPDYWATWKPLMAELNRAGWRTAALDLRG
YNLSDKPDGVAAYAMPNLIGDVAAVIAAEGAKDAVVIGHDWGAAIAWQVAMNRPDLVNRLVILSVPHPAGFAREMATNAE
QQKNSQYARNFQQPGFEKTLTAEGLAGWVKDAAEKPGYVEAFKRSDFAAMLNYYRANYPSGTGAATAAPPSMATAARIKA
PTLVIHGMKDTALNAAGHAGTWDHVDADTTIVMFPQAAHFVQHDAKDQVNRTVKGWLAARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=288, Percent_Identity=28.125, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI27597073, Length=310, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI218777840, Length=244, Percent_Identity=29.9180327868852, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI13376164, Length=244, Percent_Identity=29.9180327868852, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17554012, Length=292, Percent_Identity=28.4246575342466, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17562298, Length=293, Percent_Identity=27.6450511945392, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32304; Mature: 32304

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTAVLALAAAFALSSAAWAAPQDRYAANGAVKIHYVVEGEGPLVVLLHGFPDYWATWK
CHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEECCCCEEEEEECCCCHHHHHH
PLMAELNRAGWRTAALDLRGYNLSDKPDGVAAYAMPNLIGDVAAVIAAEGAKDAVVIGHD
HHHHHHHHCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECC
WGAAIAWQVAMNRPDLVNRLVILSVPHPAGFAREMATNAEQQKNSQYARNFQQPGFEKTL
CCCEEEEEEECCCCHHHCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHH
TAEGLAGWVKDAAEKPGYVEAFKRSDFAAMLNYYRANYPSGTGAATAAPPSMATAARIKA
HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC
PTLVIHGMKDTALNAAGHAGTWDHVDADTTIVMFPQAAHFVQHDAKDQVNRTVKGWLAAR
CEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure
MIRTAVLALAAAFALSSAAWAAPQDRYAANGAVKIHYVVEGEGPLVVLLHGFPDYWATWK
CHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEEEECCCCEEEEEECCCCHHHHHH
PLMAELNRAGWRTAALDLRGYNLSDKPDGVAAYAMPNLIGDVAAVIAAEGAKDAVVIGHD
HHHHHHHHCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECC
WGAAIAWQVAMNRPDLVNRLVILSVPHPAGFAREMATNAEQQKNSQYARNFQQPGFEKTL
CCCEEEEEEECCCCHHHCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHH
TAEGLAGWVKDAAEKPGYVEAFKRSDFAAMLNYYRANYPSGTGAATAAPPSMATAARIKA
HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC
PTLVIHGMKDTALNAAGHAGTWDHVDADTTIVMFPQAAHFVQHDAKDQVNRTVKGWLAAR
CEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]