Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106075

Identifier: 197106075

GI number: 197106075

Start: 3003244

End: 3003930

Strand: Reverse

Name: 197106075

Synonym: PHZ_c2614

Alternate gene names: NA

Gene position: 3003930-3003244 (Counterclockwise)

Preceding gene: 197106077

Following gene: 197106066

Centisome position: 75.17

GC content: 74.24

Gene sequence:

>687_bases
ATGTCCAAGCTCAGCATCGTCATCGCCCTCTATCCCGGCGTCACCCACCTCGACTTCACCGGGCCGCACCAGTTTCTCGT
CCGCACGCCGGACGCGGAGGTGACGGTCGCTTCGCTGGGCGGTCGTGACATCGAGGCCGAGGGGCTCACCTTTTCGGGCC
TGGCCGACCTGGCGGCTGTGGAGCGCTGCGACGTGCTGCTGGTCCCCGGCGGCTTCGGCGCCACCGACGCCATCCTGGAC
GAGGCGTTCATGGCGCAGATCCGGCGGCTGGGCGGGACCGCCCGCTATCTCACCAGCGTCTGCACCGGCTCGCTGATCCT
GGGCGCGGCCGGCTTCCTGACGGGCCGGCGCGCGGCCTGCCACTGGGCCTGGCGCGACCTGCTGACGCCGTTCGGGGCGC
TCGTCTCGGAGGCGCGGGTCGAGCGGGACGGGAACATCATCACCGGCGGGGGCGTGACCGCGGGGATCGACTTCGCCCTG
GTGCTGCTGGCCGAACTGGCCGGCGAGGCCTACGCCGAGAGCGTCCAACTCGGGCTGGAGTATGCGCCGGCGCCGCCGTT
CCAGTCCGGCCGGCCGGAACAGGCCCGGCCCGAGGTGCTGGCGCAGGTGAAGGCGGTGATGGCCCAGGCCCGGGCCGGCC
GCGAGTCGGCCGCCCGCGCGGCCGCCGCGCGGCTGCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
ACGGCGATTCGGCGGCTCATGGCAGGAAGCGTGGGATCGATGGCGTTTCTGCCAGACCGTGCGCCGGCTACGGTGCCGCC
GTCAACTCAGGAGGCGGCCC

Downstream 100 bases:

>100_bases
CGTCCTTCAGGCGCCCGTCAGCGCTTCGGAACGTGGGCGATCATCTGGATCTCGACCACGCCATCGCCCGCCAGCAGCCC
GGTCGCGCCCACCGCCGTCC

Product: transcriptional regulator,ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; Transcriptional Regulator AraC Family Protein; ThiJ Family Protein; DJ-1/PfpI Family; AraC Family Transcription Regulator; Intracellular Protease/Amidase; AraC-Family Transcriptional Regulator; DJ-1/PfpI Superfamily Protein; AraC Family Transcription Regulator Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Hydratase; Cyclohexyl-Isocyanide Hydratase; ThiH/PfpI Family Amidotransferase; ADPA-Family Transcriptional Regulator; Intracellular Protease/Amidase Protein; Transcriptional Regulatory Protein; Thij/Pfpi Family Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Fis Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSKLSIVIALYPGVTHLDFTGPHQFLVRTPDAEVTVASLGGRDIEAEGLTFSGLADLAAVERCDVLLVPGGFGATDAILD
EAFMAQIRRLGGTARYLTSVCTGSLILGAAGFLTGRRAACHWAWRDLLTPFGALVSEARVERDGNIITGGGVTAGIDFAL
VLLAELAGEAYAESVQLGLEYAPAPPFQSGRPEQARPEVLAQVKAVMAQARAGRESAARAAAARLQPA

Sequences:

>Translated_228_residues
MSKLSIVIALYPGVTHLDFTGPHQFLVRTPDAEVTVASLGGRDIEAEGLTFSGLADLAAVERCDVLLVPGGFGATDAILD
EAFMAQIRRLGGTARYLTSVCTGSLILGAAGFLTGRRAACHWAWRDLLTPFGALVSEARVERDGNIITGGGVTAGIDFAL
VLLAELAGEAYAESVQLGLEYAPAPPFQSGRPEQARPEVLAQVKAVMAQARAGRESAARAAAARLQPA
>Mature_227_residues
SKLSIVIALYPGVTHLDFTGPHQFLVRTPDAEVTVASLGGRDIEAEGLTFSGLADLAAVERCDVLLVPGGFGATDAILDE
AFMAQIRRLGGTARYLTSVCTGSLILGAAGFLTGRRAACHWAWRDLLTPFGALVSEARVERDGNIITGGGVTAGIDFALV
LLAELAGEAYAESVQLGLEYAPAPPFQSGRPEQARPEVLAQVKAVMAQARAGRESAARAAAARLQPA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI28571932, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23773; Mature: 23642

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLSIVIALYPGVTHLDFTGPHQFLVRTPDAEVTVASLGGRDIEAEGLTFSGLADLAAV
CCCEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEEECCCCEECCCCCCHHHHHHHHHH
ERCDVLLVPGGFGATDAILDEAFMAQIRRLGGTARYLTSVCTGSLILGAAGFLTGRRAAC
HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HWAWRDLLTPFGALVSEARVERDGNIITGGGVTAGIDFALVLLAELAGEAYAESVQLGLE
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
YAPAPPFQSGRPEQARPEVLAQVKAVMAQARAGRESAARAAAARLQPA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKLSIVIALYPGVTHLDFTGPHQFLVRTPDAEVTVASLGGRDIEAEGLTFSGLADLAAV
CCEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEEECCCCEECCCCCCHHHHHHHHHH
ERCDVLLVPGGFGATDAILDEAFMAQIRRLGGTARYLTSVCTGSLILGAAGFLTGRRAAC
HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HWAWRDLLTPFGALVSEARVERDGNIITGGGVTAGIDFALVLLAELAGEAYAESVQLGLE
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
YAPAPPFQSGRPEQARPEVLAQVKAVMAQARAGRESAARAAAARLQPA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA