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The map label for this gene is yjgH [H]

Identifier: 197106074

GI number: 197106074

Start: 3002810

End: 3003226

Strand: Direct

Name: yjgH [H]

Synonym: PHZ_c2613

Alternate gene names: 197106074

Gene position: 3002810-3003226 (Clockwise)

Preceding gene: 197106073

Following gene: 197106076

Centisome position: 75.14

GC content: 71.22

Gene sequence:

>417_bases
GTGGTGATCCCCGTCCCGGGCGCCCAGCGGGCCTACGACGACTACAAGTACGCCCCCGCCCGCCGCGCCGGCGATGTCCT
CTACATCTCCGGCGTGATCGCCGGCCCGGCCGGCGCGGACGGCCGCGACGTGGAGGCGTTCAAGGCCCAGGTCCGCAACG
CCTTCCGCCATATCCAGCGCACGCTTCAGGCCGAGGGCCTCACCTTCGCCGACGTGGCCATGATCAACACCTTCCACGTC
TGGGACGGGCCGGGCTTCCGGGGGTCGCGCGACGATCAGTTCCGGGCCTTCAGCGCGGTGAAGGACGAGTTCATGTCCGC
CCCGCATCCGGCCTGGACGGCGGTGGGCGCGACCGGGCTGCTGGCGGGCGATGGCGTGGTCGAGATCCAGATGATCGCCC
ACGTTCCGAAGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCCATCGCCGCGCTCCTCCTGCCCGCCCACGCCGCGGCCCAGGTCCCGCTCCAGGCCGACGCCTACCCGAAGATCA
TCCCCTCGCCCGGCGGGCAC

Downstream 100 bases:

>100_bases
CGGGCGCCTGAAGGACGTCAGGCCGGCTGCAGCCGCGCGGCGGCCGCGCGGGCGGCCGACTCGCGGCCGGCCCGGGCCTG
GGCCATCACCGCCTTCACCT

Product: putative translation initiation inhibitor, yjgF family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MVIPVPGAQRAYDDYKYAPARRAGDVLYISGVIAGPAGADGRDVEAFKAQVRNAFRHIQRTLQAEGLTFADVAMINTFHV
WDGPGFRGSRDDQFRAFSAVKDEFMSAPHPAWTAVGATGLLAGDGVVEIQMIAHVPKR

Sequences:

>Translated_138_residues
MVIPVPGAQRAYDDYKYAPARRAGDVLYISGVIAGPAGADGRDVEAFKAQVRNAFRHIQRTLQAEGLTFADVAMINTFHV
WDGPGFRGSRDDQFRAFSAVKDEFMSAPHPAWTAVGATGLLAGDGVVEIQMIAHVPKR
>Mature_138_residues
MVIPVPGAQRAYDDYKYAPARRAGDVLYISGVIAGPAGADGRDVEAFKAQVRNAFRHIQRTLQAEGLTFADVAMINTFHV
WDGPGFRGSRDDQFRAFSAVKDEFMSAPHPAWTAVGATGLLAGDGVVEIQMIAHVPKR

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=133, Percent_Identity=36.8421052631579, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14944; Mature: 14944

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIPVPGAQRAYDDYKYAPARRAGDVLYISGVIAGPAGADGRDVEAFKAQVRNAFRHIQR
CEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
TLQAEGLTFADVAMINTFHVWDGPGFRGSRDDQFRAFSAVKDEFMSAPHPAWTAVGATGL
HHHHCCCCCHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEE
LAGDGVVEIQMIAHVPKR
ECCCCEEEEEEEECCCCC
>Mature Secondary Structure
MVIPVPGAQRAYDDYKYAPARRAGDVLYISGVIAGPAGADGRDVEAFKAQVRNAFRHIQR
CEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
TLQAEGLTFADVAMINTFHVWDGPGFRGSRDDQFRAFSAVKDEFMSAPHPAWTAVGATGL
HHHHCCCCCHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEE
LAGDGVVEIQMIAHVPKR
ECCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]