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The map label for this gene is ykjA [H]

Identifier: 197106072

GI number: 197106072

Start: 3001543

End: 3002022

Strand: Direct

Name: ykjA [H]

Synonym: PHZ_c2611

Alternate gene names: 197106072

Gene position: 3001543-3002022 (Clockwise)

Preceding gene: 197106071

Following gene: 197106073

Centisome position: 75.11

GC content: 71.04

Gene sequence:

>480_bases
ATGGACCCGAGCGCCTTCTTCTCCGGCTGGGAGCCCCTCCTGCGGATCGTGGTGGTCGGGCTCGCCGCCTACGTGGCGCT
GGTCGTCATGCTGAGGCTGTCGGGCAAGCGGACGCTGTCGAAGCTCAACGCCTTCGACTTCGTGGTGACGGTGGCCCTCG
GCTCGACGCTCGCCACCGTCATCATCTCCCGCGAGACCTCGCTGGCCGAGGGGCTTACCGCCCTGGCCCTGCTCATCGTG
GCGCAGTTCGCCGTGACCTGGACGACGGCGCGCTGGGGCCGCTTCAACCGCGCGGTCAAGTCCGAACCGACGGTGCTGCT
CCGCTGCGGCGAGCCTATCCGCCGCGCCCTGCGGCGCGAGCGGGTCACCGAGGACGAGCTGCTGTCGGCGGTGCGCGACA
AGGGCGGCCGCAGCCTCGACGAGGCCGAGGCCATCTTCCTTGAGGCGGACGGCTCGCTCTCGGCGATCCTGTCGCGCTGA

Upstream 100 bases:

>100_bases
CGGACTACGGCCAGCCGGGGGCAGCGCCCTCGCAGGTGGAGTCCAACAGCCCCGGAACCGGCGCCTCCTCGGGGAGCGAC
ACGCCGCCGCTGAACTGAGC

Downstream 100 bases:

>100_bases
GCGAGCCTGGAAGGCTCGGAACCGGGCCGGTCGCCCGGGGTTCACCCTTCGAACAGGAGGCTCACCCCATGGCATCGAAA
GCTCCCCCGATCCCGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MDPSAFFSGWEPLLRIVVVGLAAYVALVVMLRLSGKRTLSKLNAFDFVVTVALGSTLATVIISRETSLAEGLTALALLIV
AQFAVTWTTARWGRFNRAVKSEPTVLLRCGEPIRRALRRERVTEDELLSAVRDKGGRSLDEAEAIFLEADGSLSAILSR

Sequences:

>Translated_159_residues
MDPSAFFSGWEPLLRIVVVGLAAYVALVVMLRLSGKRTLSKLNAFDFVVTVALGSTLATVIISRETSLAEGLTALALLIV
AQFAVTWTTARWGRFNRAVKSEPTVLLRCGEPIRRALRRERVTEDELLSAVRDKGGRSLDEAEAIFLEADGSLSAILSR
>Mature_159_residues
MDPSAFFSGWEPLLRIVVVGLAAYVALVVMLRLSGKRTLSKLNAFDFVVTVALGSTLATVIISRETSLAEGLTALALLIV
AQFAVTWTTARWGRFNRAVKSEPTVLLRCGEPIRRALRRERVTEDELLSAVRDKGGRSLDEAEAIFLEADGSLSAILSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 17333; Mature: 17333

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSAFFSGWEPLLRIVVVGLAAYVALVVMLRLSGKRTLSKLNAFDFVVTVALGSTLATV
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IISRETSLAEGLTALALLIVAQFAVTWTTARWGRFNRAVKSEPTVLLRCGEPIRRALRRE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
RVTEDELLSAVRDKGGRSLDEAEAIFLEADGSLSAILSR
CCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHCC
>Mature Secondary Structure
MDPSAFFSGWEPLLRIVVVGLAAYVALVVMLRLSGKRTLSKLNAFDFVVTVALGSTLATV
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IISRETSLAEGLTALALLIVAQFAVTWTTARWGRFNRAVKSEPTVLLRCGEPIRRALRRE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
RVTEDELLSAVRDKGGRSLDEAEAIFLEADGSLSAILSR
CCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]