Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106045

Identifier: 197106045

GI number: 197106045

Start: 2969083

End: 2969811

Strand: Reverse

Name: 197106045

Synonym: PHZ_c2584

Alternate gene names: NA

Gene position: 2969811-2969083 (Counterclockwise)

Preceding gene: 197106046

Following gene: 197106041

Centisome position: 74.31

GC content: 76.41

Gene sequence:

>729_bases
ATGAGCGAAGCGCCCGAACTGGAAGGCCTCGAGGCCCTGGCCGCCGAGCACGCGCTGGGCGTGCTGACCGGCGCCGAGCG
CGCCGAGGCCGAGGTCCGGATGGCCCGCGATCCCGTCTTCGCGGCCCAGGTGGACGCCTGGCGCATCCGCCTCGCGCCGC
TGGTGGACGGCGTGACGCCGGTCGCCCCGCCCGCCGGCCTGTGGGAGCGGATCGCCAGGCGCCTGCCGGCCAATGACAAT
CCCCGCGCCGTGCGGCGGCTGAGATTCTGGCGCGCCGCCGCCATGGGCGGCTTCGGCCTGGCCGCCGCCAGCCTTGCGGC
CGTCGTGGTGGTCGCCAACCGGCCGCCGACCGTGATCCAGGCCCCGCCGGCCCAGCCGGGGCCGCTGCTGAACGCCAGCC
TGATGCCGCAGGCGGGCGGCGTGCAGCCGCTGTTCGTCGCCGCCTACGACCCGCAGCGGAAGGCGCTGATCGTCACCTCC
CTGGTGCCGCCGGGGACCGATCCGCTGCACGTGCACCAGCTCTGGCTGATCCCGGGCGACGGCAAGCCGCGTTCGCTCGG
CATGGTCGAGCCCGGGACGTCCCGGGCCATGCCGATGCCGGAGACCCTCGACCGGATGGTCTCGGAGGGCGCCGAACTCG
CCGTCTCGGTCGAGCCGCCGGGCGGCTCCACGGATCCCCAGGGTCCGAGCGGCCCGATCGCGGCCCGCGGCGCGCTCGGC
CGCATCTAG

Upstream 100 bases:

>100_bases
TCACCTATGACGCGCTGGCCCGGCGGATGGAGACGCCGCTGGGGACGGTGAAGAGCTGGATCCGCCGCGGTCTCGCCAAA
CTCCGGGGGTGCCTGGAGCA

Downstream 100 bases:

>100_bases
CCGGGCCGGATCCGGCCCTAGGTCAGCGCCCGCAGCCAGGCCGGCAGCTCGGCGAGGCTGGACAGCTCCGTAAAGCGCGG
GTGGTTCTCCGGGGCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSEAPELEGLEALAAEHALGVLTGAERAEAEVRMARDPVFAAQVDAWRIRLAPLVDGVTPVAPPAGLWERIARRLPANDN
PRAVRRLRFWRAAAMGGFGLAAASLAAVVVVANRPPTVIQAPPAQPGPLLNASLMPQAGGVQPLFVAAYDPQRKALIVTS
LVPPGTDPLHVHQLWLIPGDGKPRSLGMVEPGTSRAMPMPETLDRMVSEGAELAVSVEPPGGSTDPQGPSGPIAARGALG
RI

Sequences:

>Translated_242_residues
MSEAPELEGLEALAAEHALGVLTGAERAEAEVRMARDPVFAAQVDAWRIRLAPLVDGVTPVAPPAGLWERIARRLPANDN
PRAVRRLRFWRAAAMGGFGLAAASLAAVVVVANRPPTVIQAPPAQPGPLLNASLMPQAGGVQPLFVAAYDPQRKALIVTS
LVPPGTDPLHVHQLWLIPGDGKPRSLGMVEPGTSRAMPMPETLDRMVSEGAELAVSVEPPGGSTDPQGPSGPIAARGALG
RI
>Mature_241_residues
SEAPELEGLEALAAEHALGVLTGAERAEAEVRMARDPVFAAQVDAWRIRLAPLVDGVTPVAPPAGLWERIARRLPANDNP
RAVRRLRFWRAAAMGGFGLAAASLAAVVVVANRPPTVIQAPPAQPGPLLNASLMPQAGGVQPLFVAAYDPQRKALIVTSL
VPPGTDPLHVHQLWLIPGDGKPRSLGMVEPGTSRAMPMPETLDRMVSEGAELAVSVEPPGGSTDPQGPSGPIAARGALGR
I

Specific function: Unknown

COG id: COG5343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25231; Mature: 25100

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPELEGLEALAAEHALGVLTGAERAEAEVRMARDPVFAAQVDAWRIRLAPLVDGVTP
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCEEEEEEEHHHCCCCC
VAPPAGLWERIARRLPANDNPRAVRRLRFWRAAAMGGFGLAAASLAAVVVVANRPPTVIQ
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCEEE
APPAQPGPLLNASLMPQAGGVQPLFVAAYDPQRKALIVTSLVPPGTDPLHVHQLWLIPGD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCC
GKPRSLGMVEPGTSRAMPMPETLDRMVSEGAELAVSVEPPGGSTDPQGPSGPIAARGALG
CCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCC
RI
CC
>Mature Secondary Structure 
SEAPELEGLEALAAEHALGVLTGAERAEAEVRMARDPVFAAQVDAWRIRLAPLVDGVTP
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCEEEEEEEHHHCCCCC
VAPPAGLWERIARRLPANDNPRAVRRLRFWRAAAMGGFGLAAASLAAVVVVANRPPTVIQ
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCEEE
APPAQPGPLLNASLMPQAGGVQPLFVAAYDPQRKALIVTSLVPPGTDPLHVHQLWLIPGD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCC
GKPRSLGMVEPGTSRAMPMPETLDRMVSEGAELAVSVEPPGGSTDPQGPSGPIAARGALG
CCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCC
RI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA