Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106035

Identifier: 197106035

GI number: 197106035

Start: 2958316

End: 2959968

Strand: Reverse

Name: 197106035

Synonym: PHZ_c2574

Alternate gene names: NA

Gene position: 2959968-2958316 (Counterclockwise)

Preceding gene: 197106036

Following gene: 197106033

Centisome position: 74.07

GC content: 72.29

Gene sequence:

>1653_bases
ATGAAGCCGCTCAAGATGTTGGCCGTCCCGGCCGTGGCCGTCGCGCTGGCCTCTGCGCTGGCCTCTGGCGTGAGCGCCCA
GCCGGTCTCCGGCGCGGCTTCGGCCGAGCGCATCCGGGCGCACATGGGCTTCCTGGCCAGCGATCTCCTGGAGGGGCGCG
AGGCGGGGACCCGCGGCTACGACATCGCCGCCGAGTACGCCGCCGCCCAGTTCGCGCTGCTGGGCCTGAAGCCGGCCGGC
GACGCCGGCTCGTACTTCCAGACGGTGCCGATGGTCTCGGCCCGCGCGGTGGACGAGGGCCGGCTGGTCGTGAAGGGGCC
CACGGGGACGACGGCCCTGGTCCACGGCGAGGACTACCTCGTCGCCCGCAACCCCGCCGCCGCCGAGACGAAGGTCGCCG
CGCCCCTGGTGTTCGTCGGCTACGGCGTCGTGGCCCCCGAGAAGGGCCGCGACGACTACAAGGGCCTGGACGTGAAGGGG
AAGATCGTCGTCGCTCTCGACGGCGCGCCCAAGGCGTTCCAGTCGGAGGAGCGCGCCTACTACCGCAGCGGCCGCACCAA
GCGCCTCGAGGCGGCCAAGCGGGGCGCGGTGGGCTTCATCGAGGTCAACACGCCCACCAGCGAGAAGATGCGGCCGTTCG
ACCAGTCGGCGCGCAACTGGAAGACCTGGGCCATGACCTGGCGTGCGCCCGGCGGCGGCCCGTTCGTGGTCGCACCCGAG
ACGCCGCTGCTGGCGAGCGTGAGCGTGAAGGGCGCGGCCAAGCTGTTCGCCGGCGCCAAGGTCCCGCTGGAGACGATCTA
CGCCGCCGCCGATGCGCCCAAGGGCGTGACGCCCCGCTTCGCCCTGCCGGCCTCGGCCGAGGCGGCGTTCCGCACCGAGC
TGAAGGAGACCCAGAGCCGCAACGTGGCGGCCCTGCTGGAGGGTTCGGACACCGCCCTGAAGGCCGAGACGGTGGTGCTG
TCCGCCCACCTCGACCACGTCGGCGTGCGCGAGACGAAGGACGGCGAGGACGGACTGCACAACGGCGCGCTCGACAACGC
CGGCGGCGTCGCCACGACCTTCGAGGTCGCCCGGGCCTTCGTCGAGAGCGGCGAGAAGCCGAAACGTTCGGTCCTGTTCC
TGCTGGTGACCGCCGAGGAGAAGGGGCTAGTCGGCGCCGAGTACTTCGCCCGCAATCCGACTCCCGGGGTCGGGACGATG
GTGGCCAACGTCAACCTCGACATGCCCATCCTGACCTACGACTTCAGCGACCTGGTGGCGTTCGGCGCCGAGCGCTCGGC
GATCGGACCGGCGGTCCAGCGGGCGGCCGCCCGCGTGGGCGTGGCCCTGTCGCCGGACCCGCTCCCGGACGAGGGCCTGT
TCACCCGTTCGGACCACTACCGCTTCGTCGAGGCGGGGGTGCCCTCGGTGTTCCTGATGACCGGCTTCGCCGAGGGCGGC
GAGGAGAAGTTCCGCGGCTTCCTGGCCGGCTGCTACCACAAGCCCTGCGATGACCTCTCGCAGCCGATCGACTACGCCGC
GGGCGCCAAGTTCGCGAAGATCAACTACGAGATCGCCCGCGAGCTGGCAGACGCCGACCGGCGCCCGGCCTGGAACCGGG
GCGACTTCTTCGCCGGCCGCTTCGCCACGGACCGGACGGTCGCCGACCGCTAG

Upstream 100 bases:

>100_bases
GCCGCTCGCGGAAGCTGCGCAGCTTCCTCGACAGCTAGGACTGGCGCGCACGCCGCGATCCATTAGAACTCCCCGGGACA
GGCGTTCCGGGGAGTTTTTC

Downstream 100 bases:

>100_bases
CGCCAGCCGTAGTTGAAGCTGACCGAGACGCGCGGGGTCCTGGCCCGGTTCGCCGGGACCTCGTGCCGAAGCCAGCTTTC
CCACATGTAGACCGTGCCGG

Product: aminopeptidase

Products: NA

Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; M20/M25/M40 Family Peptidase; LB Protein; Aminopeptidase Y; Protein Containing Aminopeptidase Domain; WD40-Like Beta Propeller

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG
DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG
KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE
TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL
SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM
VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG
EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR

Sequences:

>Translated_550_residues
MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG
DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG
KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE
TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL
SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM
VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG
EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR
>Mature_550_residues
MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG
DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG
KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE
TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL
SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM
VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG
EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58129; Mature: 58129

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DIAAEYAAAQFALLGLKPAGDAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYL
HHHHHHHHHEEEEEECCCCCCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEECCEEE
VARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKGKIVVALDGAPKAFQSEERAY
EECCCCCCCHHHHCCEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
YRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE
HHCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCHHHCCCCEEEEEEEECCCCCCEEECCC
TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSR
CCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCC
NVAALLEGSDTALKAETVVLSAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAF
CEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTMVANVNLDMPILTYDFSDLVA
HHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEECHHHHHH
FGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG
HCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEECCCCEEEEEECCCCCC
EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGR
HHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEECC
FATDRTVADR
CCCCCCCCCC
>Mature Secondary Structure
MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DIAAEYAAAQFALLGLKPAGDAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYL
HHHHHHHHHEEEEEECCCCCCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEECCEEE
VARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKGKIVVALDGAPKAFQSEERAY
EECCCCCCCHHHHCCEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
YRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE
HHCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCHHHCCCCEEEEEEEECCCCCCEEECCC
TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSR
CCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCC
NVAALLEGSDTALKAETVVLSAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAF
CEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTMVANVNLDMPILTYDFSDLVA
HHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEECHHHHHH
FGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG
HCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEECCCCEEEEEECCCCCC
EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGR
HHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEECC
FATDRTVADR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA