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The map label for this gene is ybcL [C]

Identifier: 197106031

GI number: 197106031

Start: 2952985

End: 2953533

Strand: Direct

Name: ybcL [C]

Synonym: PHZ_c2570

Alternate gene names: 197106031

Gene position: 2952985-2953533 (Clockwise)

Preceding gene: 197106029

Following gene: 197106032

Centisome position: 73.89

GC content: 68.85

Gene sequence:

>549_bases
ATGAGCGAGCCCGAACGTCATTCCGGCGAGTCCATCACCATCATGCGCGTGGACCCGATCTACGACACCGGGGTCCTGGT
GACTTGCCCGGTGCAGGAGGCGGACGGGCGCCTGCCCGACCGCCACTCGGCCTACCACGACAACATCTCCCCGCCCCTGC
AGTGGTCGAACGTCCCGGACGTGAAGGCCTGGGCGCTCGTGGTCGAGGATCCGGACGCCCCGCGCGAGGAGCCGTTCGTG
CACTGGATGCTGTGGAACGTCCGCGGCGACATCCACTCGATCCCCGAGGGCCTCGGCAACAATCCGCAGCTCGTCTCGCC
CCAGGGCGCGATCCAGGGGAAGAACGACATGGGCGGCTACGGCTGGTTCGGGCCGCGCCCGCCGGCGGGCCACGGCGTGC
ACCGCTACTACTTCCAGGTCTTCGCCCTGAACGACTGGATCGAGATGGGGCCCGACACGCCGCTCAACGAGCTGCTCAAC
GCGCTGAAGGCGCGCACCCTCGCCAAGGGCGAGATGATGGCCACCTACGAGGCGCCCACCGAGCAGTAG

Upstream 100 bases:

>100_bases
GTGCGATGCAGCACGCCGGATGGCTGGGGGCGAGGCCGCCGCGCGCAACCCATCCCCCGCCGCCCCGGTTCTATTCCTGC
CCCCCAGCAGGAGACCGGCC

Downstream 100 bases:

>100_bases
CCCGCCCGCCTTGACGGACCCGGCGTCAGTCGGGCGCTATGGCGCCTGAACGGCGATCAGGGAGGTCCGGCATGGACGGC
GCGCAGGTATCGGGCGGTCT

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSEPERHSGESITIMRVDPIYDTGVLVTCPVQEADGRLPDRHSAYHDNISPPLQWSNVPDVKAWALVVEDPDAPREEPFV
HWMLWNVRGDIHSIPEGLGNNPQLVSPQGAIQGKNDMGGYGWFGPRPPAGHGVHRYYFQVFALNDWIEMGPDTPLNELLN
ALKARTLAKGEMMATYEAPTEQ

Sequences:

>Translated_182_residues
MSEPERHSGESITIMRVDPIYDTGVLVTCPVQEADGRLPDRHSAYHDNISPPLQWSNVPDVKAWALVVEDPDAPREEPFV
HWMLWNVRGDIHSIPEGLGNNPQLVSPQGAIQGKNDMGGYGWFGPRPPAGHGVHRYYFQVFALNDWIEMGPDTPLNELLN
ALKARTLAKGEMMATYEAPTEQ
>Mature_181_residues
SEPERHSGESITIMRVDPIYDTGVLVTCPVQEADGRLPDRHSAYHDNISPPLQWSNVPDVKAWALVVEDPDAPREEPFVH
WMLWNVRGDIHSIPEGLGNNPQLVSPQGAIQGKNDMGGYGWFGPRPPAGHGVHRYYFQVFALNDWIEMGPDTPLNELLNA
LKARTLAKGEMMATYEAPTEQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=132, Percent_Identity=35.6060606060606, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786990, Length=125, Percent_Identity=36.8, Blast_Score=73, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20338; Mature: 20207

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPERHSGESITIMRVDPIYDTGVLVTCPVQEADGRLPDRHSAYHDNISPPLQWSNVPD
CCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
VKAWALVVEDPDAPREEPFVHWMLWNVRGDIHSIPEGLGNNPQLVSPQGAIQGKNDMGGY
CEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
GWFGPRPPAGHGVHRYYFQVFALNDWIEMGPDTPLNELLNALKARTLAKGEMMATYEAPT
CCCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
EQ
CC
>Mature Secondary Structure 
SEPERHSGESITIMRVDPIYDTGVLVTCPVQEADGRLPDRHSAYHDNISPPLQWSNVPD
CCCCCCCCCEEEEEEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
VKAWALVVEDPDAPREEPFVHWMLWNVRGDIHSIPEGLGNNPQLVSPQGAIQGKNDMGGY
CEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
GWFGPRPPAGHGVHRYYFQVFALNDWIEMGPDTPLNELLNALKARTLAKGEMMATYEAPT
CCCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
EQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]