| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is paaG [H]
Identifier: 197106005
GI number: 197106005
Start: 2920132
End: 2920950
Strand: Reverse
Name: paaG [H]
Synonym: PHZ_c2544
Alternate gene names: 197106005
Gene position: 2920950-2920132 (Counterclockwise)
Preceding gene: 197106007
Following gene: 197106004
Centisome position: 73.09
GC content: 69.72
Gene sequence:
>819_bases ATGAGCCGAAGCGTTCTGGAGGCCGTGCAGGACGGGGTGATGACCATCACGCTGAACCGTCCCGAGCGGCTGAACGCCAT GAACGGCGAACTGATGGAGCAACTGCTCGAGGCCGTGCAGCGGGCCGCCGCCGACCCCAAGGTCGCTTGCGTCGTGCTGA CGGGCGCCGGCCGCGGCTTCTGCTCCGGAGGCGACCTGAAGAACAAGGACGCGGAGATCGCCGCGGACGCCCTGTTGCCG CCGGAGCAGCGGAAGCGGCCGCAGACCATCGAGGCCAAGATCGCCAGGTTGCGGCGGCTGACGGAGGCGGCGCGCCTGCT GCACGACATGCCAAAGCCCACCGTCGCGATGATCAACGGCGCCTGTGCAGGGGCCGGACTGTCGCTGGCCGGAGCCTGCG ACCTGCGGATCGCCGCTCAGTCAGCCGTGATCACGAGCGCCTTCGGCAAGGCCGGCCTGTCGGGGGACTTCGGCGGCAGC TGGTTCTGGTCGCGGATACTCGGGGCCGCGAAGGTTCGGGAGCTGTACCTGCTCTCGGAGCGGCGCACCGCGGCGGAGGC GCTGGCGTTCGGCCTGGTGCACCGTGTGGTTCCGGACGAGGAGCTGCTGACGCACGTGCAGGCCCTGACCCTGAGCATCG CCACGGGTCCGACGCACGCCTACGGCTTCATGAAGCGCAACCTGGCCGCGGCCGAGGATGGCGCCCTCGAGGAGGTGTTG GATCTGGAAGCGACCACCATGACCCTGTGCAGCTACGAGATCGAGGAGCGTCGCCTCTTGGAAGCGGCCCAGGCCGCGAC GCGTGGCCCGCCTTCCTGA
Upstream 100 bases:
>100_bases CAGCGCCAGTTTCATCCCTGTTCCCCTTTTAATTAGTATGATGAGTTATACGATACGGCGCGGCGCGGTTGAAGACGCCG CATTGGCGTGGGAGGGACCG
Downstream 100 bases:
>100_bases GGGCCGCGCCTTGTACGGTCTCGCGGAATGGGTATACGTAGTTAGCTAATAAAAAGAATTGGAGGCGCGACTGATCTCGT GGTCGCGGACAGGGATGAAG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSRSVLEAVQDGVMTITLNRPERLNAMNGELMEQLLEAVQRAAADPKVACVVLTGAGRGFCSGGDLKNKDAEIAADALLP PEQRKRPQTIEAKIARLRRLTEAARLLHDMPKPTVAMINGACAGAGLSLAGACDLRIAAQSAVITSAFGKAGLSGDFGGS WFWSRILGAAKVRELYLLSERRTAAEALAFGLVHRVVPDEELLTHVQALTLSIATGPTHAYGFMKRNLAAAEDGALEEVL DLEATTMTLCSYEIEERRLLEAAQAATRGPPS
Sequences:
>Translated_272_residues MSRSVLEAVQDGVMTITLNRPERLNAMNGELMEQLLEAVQRAAADPKVACVVLTGAGRGFCSGGDLKNKDAEIAADALLP PEQRKRPQTIEAKIARLRRLTEAARLLHDMPKPTVAMINGACAGAGLSLAGACDLRIAAQSAVITSAFGKAGLSGDFGGS WFWSRILGAAKVRELYLLSERRTAAEALAFGLVHRVVPDEELLTHVQALTLSIATGPTHAYGFMKRNLAAAEDGALEEVL DLEATTMTLCSYEIEERRLLEAAQAATRGPPS >Mature_271_residues SRSVLEAVQDGVMTITLNRPERLNAMNGELMEQLLEAVQRAAADPKVACVVLTGAGRGFCSGGDLKNKDAEIAADALLPP EQRKRPQTIEAKIARLRRLTEAARLLHDMPKPTVAMINGACAGAGLSLAGACDLRIAAQSAVITSAFGKAGLSGDFGGSW FWSRILGAAKVRELYLLSERRTAAEALAFGLVHRVVPDEELLTHVQALTLSIATGPTHAYGFMKRNLAAAEDGALEEVLD LEATTMTLCSYEIEERRLLEAAQAATRGPPS
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=262, Percent_Identity=31.2977099236641, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI45643119, Length=214, Percent_Identity=29.9065420560748, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI260275230, Length=214, Percent_Identity=29.9065420560748, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI260274832, Length=214, Percent_Identity=29.9065420560748, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI194097323, Length=249, Percent_Identity=25.7028112449799, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI37594469, Length=155, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI37594471, Length=155, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI25453481, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI51538573, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4757966, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI51538581, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI157694516, Length=242, Percent_Identity=26.0330578512397, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI213417737, Length=242, Percent_Identity=26.0330578512397, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4757968, Length=195, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI49355787, Length=195, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI221136756, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI221136753, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI221307494, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787660, Length=243, Percent_Identity=38.6831275720165, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1788597, Length=199, Percent_Identity=35.1758793969849, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787659, Length=240, Percent_Identity=30.8333333333333, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI221142681, Length=210, Percent_Identity=31.4285714285714, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1790281, Length=204, Percent_Identity=26.9607843137255, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17534483, Length=246, Percent_Identity=29.6747967479675, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17536985, Length=241, Percent_Identity=28.2157676348548, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17535521, Length=232, Percent_Identity=27.1551724137931, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17540714, Length=191, Percent_Identity=34.0314136125654, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25145438, Length=260, Percent_Identity=29.2307692307692, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17549921, Length=195, Percent_Identity=28.2051282051282, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560910, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129971, Length=235, Percent_Identity=31.063829787234, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24653477, Length=235, Percent_Identity=31.063829787234, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357171, Length=222, Percent_Identity=29.2792792792793, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24654903, Length=238, Percent_Identity=26.0504201680672, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920382, Length=231, Percent_Identity=26.8398268398268, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24650670, Length=216, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24653139, Length=227, Percent_Identity=28.6343612334802, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922422, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 28978; Mature: 28846
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSVLEAVQDGVMTITLNRPERLNAMNGELMEQLLEAVQRAAADPKVACVVLTGAGRGF CCHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC CSGGDLKNKDAEIAADALLPPEQRKRPQTIEAKIARLRRLTEAARLLHDMPKPTVAMING CCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHCCC ACAGAGLSLAGACDLRIAAQSAVITSAFGKAGLSGDFGGSWFWSRILGAAKVRELYLLSE CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RRTAAEALAFGLVHRVVPDEELLTHVQALTLSIATGPTHAYGFMKRNLAAAEDGALEEVL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHH DLEATTMTLCSYEIEERRLLEAAQAATRGPPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRSVLEAVQDGVMTITLNRPERLNAMNGELMEQLLEAVQRAAADPKVACVVLTGAGRGF CHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC CSGGDLKNKDAEIAADALLPPEQRKRPQTIEAKIARLRRLTEAARLLHDMPKPTVAMING CCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHCCC ACAGAGLSLAGACDLRIAAQSAVITSAFGKAGLSGDFGGSWFWSRILGAAKVRELYLLSE CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RRTAAEALAFGLVHRVVPDEELLTHVQALTLSIATGPTHAYGFMKRNLAAAEDGALEEVL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHH DLEATTMTLCSYEIEERRLLEAAQAATRGPPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]