| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105991
Identifier: 197105991
GI number: 197105991
Start: 2904311
End: 2905570
Strand: Reverse
Name: 197105991
Synonym: PHZ_c2530
Alternate gene names: NA
Gene position: 2905570-2904311 (Counterclockwise)
Preceding gene: 197105992
Following gene: 197105990
Centisome position: 72.71
GC content: 66.9
Gene sequence:
>1260_bases ATGACGGACGCCGCACTGAAGGACAAGCCGCCATCCAACTACGGCGTGCTCACGGACGAGGGGATCGCCAAGCTGCGCCA GCGGGTCGGCATCCAGTACAACAAGCCCACGCCGCCGCATAACTACGAGGTGACCTGGGACGGTACGCGCCACTTCGCCT TCGGCTACGGCGACGACAACCCGCTGTGGTGCGACCCGGAATACGGCAAGAAGACCCGCTGGGGCGGGCTGATCGCGCCG CCCAACTTCCTCTACACTATGGGCGAGCCGGACTCCGCCCCCCTGACGGCGGAGCAGAAGCAGCTGCTGAAGGGCGACCC GCTGGTGGGGCTGGGCTCGTACCAAGCCGTCATGGAGTTCGAGTGGTGGCGTCCGCTGCGGCTGGCCGACCGGCTGAAGC AGCGGTCGGCGCTGATCGGCGTGCAGGTGAACGAGCGCAGCAGCTTCTCGGGGCGCACGGTCTCCGAGATCCAGGGCTAC ATCTACCGCAACCAGGACGACGAACTGCACGCGATCCAGCGCGGCACCTGGATGCGCGCCGAGCGTCACGCCTCCAAGGA GCGGAAGAAGGAATACGAGCTTCCGCAGCCCTACACGGCCGAGCAACTCGCCGAGATCGACGCCGCCTACGAGGCCGAGA CCATCCGCGGCGCCAACACGCTCTACTTCGAGGACGTCAAGGAGGGGGAGGAGCTCCCCACCATCGTCCGCGGCCCGATG CGCACCAGCGACCTGATCATCTGGCACATCGGCTGGGGCATGCAGTTGACGCCGCCCGGCGCGTTCCGCCTGTCCTACAA GATCCGCAAGAAGGTCCCGGGCATGTACACGCCCAATCCCATGGGCGTGCCGGACACCGTCCAGCGCCTGCACTGGGAGA AGGAGTGGGCCAACGAGCTCGGCATTCCGGTGTCCTATGACTACGGCGGCCTGCGCGAGACTTTCCTCACCAACATCATC ACCAACTGGATGGGTGACGACGGCTGGCTCTGGAAGCTGTCGTGCCAGCACCGGCGCTTCGTCTACACGGGCGACACCTA CTGGATCAAAGGCCGGGTGCAGGAGAAGCGCCAGGTCGAGGGCCGCAACGAGGTGCACCTCGAGGTGTGGGTGGAGAACC AGTGGGGCACCACGGTGACCCCCGGCAAGGCCGTCGTCCTGCTGCCGACGCGCGACAAGGCGGTGGAACTGCCGCGGCCT GCCGAGGAGGACATCGACCGCATGTTCGCCCACGAGGTCTCGCGCCACGCGCAGTCCTAG
Upstream 100 bases:
>100_bases CTCAAGGTCAGCCAACCCGAACTCAGGAAGCTCTTCACCGGTCCGCTGGCCGCCTGAGCGGCCTCAGAGATCGGGATGCA ATGGAAGCGAGGAAAAAGCC
Downstream 100 bases:
>100_bases TCTGACGAACGCCGGGCGGGCCCTTGGGCCGGCCCGCTACGCTCGGGAGCAGCCATGAGCTACGAGACTCTGCGCTACGA GGAGCGCGGCCGTGTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTDAALKDKPPSNYGVLTDEGIAKLRQRVGIQYNKPTPPHNYEVTWDGTRHFAFGYGDDNPLWCDPEYGKKTRWGGLIAP PNFLYTMGEPDSAPLTAEQKQLLKGDPLVGLGSYQAVMEFEWWRPLRLADRLKQRSALIGVQVNERSSFSGRTVSEIQGY IYRNQDDELHAIQRGTWMRAERHASKERKKEYELPQPYTAEQLAEIDAAYEAETIRGANTLYFEDVKEGEELPTIVRGPM RTSDLIIWHIGWGMQLTPPGAFRLSYKIRKKVPGMYTPNPMGVPDTVQRLHWEKEWANELGIPVSYDYGGLRETFLTNII TNWMGDDGWLWKLSCQHRRFVYTGDTYWIKGRVQEKRQVEGRNEVHLEVWVENQWGTTVTPGKAVVLLPTRDKAVELPRP AEEDIDRMFAHEVSRHAQS
Sequences:
>Translated_419_residues MTDAALKDKPPSNYGVLTDEGIAKLRQRVGIQYNKPTPPHNYEVTWDGTRHFAFGYGDDNPLWCDPEYGKKTRWGGLIAP PNFLYTMGEPDSAPLTAEQKQLLKGDPLVGLGSYQAVMEFEWWRPLRLADRLKQRSALIGVQVNERSSFSGRTVSEIQGY IYRNQDDELHAIQRGTWMRAERHASKERKKEYELPQPYTAEQLAEIDAAYEAETIRGANTLYFEDVKEGEELPTIVRGPM RTSDLIIWHIGWGMQLTPPGAFRLSYKIRKKVPGMYTPNPMGVPDTVQRLHWEKEWANELGIPVSYDYGGLRETFLTNII TNWMGDDGWLWKLSCQHRRFVYTGDTYWIKGRVQEKRQVEGRNEVHLEVWVENQWGTTVTPGKAVVLLPTRDKAVELPRP AEEDIDRMFAHEVSRHAQS >Mature_418_residues TDAALKDKPPSNYGVLTDEGIAKLRQRVGIQYNKPTPPHNYEVTWDGTRHFAFGYGDDNPLWCDPEYGKKTRWGGLIAPP NFLYTMGEPDSAPLTAEQKQLLKGDPLVGLGSYQAVMEFEWWRPLRLADRLKQRSALIGVQVNERSSFSGRTVSEIQGYI YRNQDDELHAIQRGTWMRAERHASKERKKEYELPQPYTAEQLAEIDAAYEAETIRGANTLYFEDVKEGEELPTIVRGPMR TSDLIIWHIGWGMQLTPPGAFRLSYKIRKKVPGMYTPNPMGVPDTVQRLHWEKEWANELGIPVSYDYGGLRETFLTNIIT NWMGDDGWLWKLSCQHRRFVYTGDTYWIKGRVQEKRQVEGRNEVHLEVWVENQWGTTVTPGKAVVLLPTRDKAVELPRPA EEDIDRMFAHEVSRHAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48282; Mature: 48151
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAALKDKPPSNYGVLTDEGIAKLRQRVGIQYNKPTPPHNYEVTWDGTRHFAFGYGDDN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEEECCCEEEEEEECCCC PLWCDPEYGKKTRWGGLIAPPNFLYTMGEPDSAPLTAEQKQLLKGDPLVGLGSYQAVMEF CEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEE EWWRPLRLADRLKQRSALIGVQVNERSSFSGRTVSEIQGYIYRNQDDELHAIQRGTWMRA CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHCCEEEECCCCHHHHHHCCCHHHH ERHASKERKKEYELPQPYTAEQLAEIDAAYEAETIRGANTLYFEDVKEGEELPTIVRGPM HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCHHHCCCC RTSDLIIWHIGWGMQLTPPGAFRLSYKIRKKVPGMYTPNPMGVPDTVQRLHWEKEWANEL CCCCEEEEEECCCEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GIPVSYDYGGLRETFLTNIITNWMGDDGWLWKLSCQHRRFVYTGDTYWIKGRVQEKRQVE CCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCEEEEECCCCHHHHCC GRNEVHLEVWVENQWGTTVTPGKAVVLLPTRDKAVELPRPAEEDIDRMFAHEVSRHAQS CCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDAALKDKPPSNYGVLTDEGIAKLRQRVGIQYNKPTPPHNYEVTWDGTRHFAFGYGDDN CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEEECCCEEEEEEECCCC PLWCDPEYGKKTRWGGLIAPPNFLYTMGEPDSAPLTAEQKQLLKGDPLVGLGSYQAVMEF CEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEE EWWRPLRLADRLKQRSALIGVQVNERSSFSGRTVSEIQGYIYRNQDDELHAIQRGTWMRA CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHCCEEEECCCCHHHHHHCCCHHHH ERHASKERKKEYELPQPYTAEQLAEIDAAYEAETIRGANTLYFEDVKEGEELPTIVRGPM HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCHHHCCCC RTSDLIIWHIGWGMQLTPPGAFRLSYKIRKKVPGMYTPNPMGVPDTVQRLHWEKEWANEL CCCCEEEEEECCCEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GIPVSYDYGGLRETFLTNIITNWMGDDGWLWKLSCQHRRFVYTGDTYWIKGRVQEKRQVE CCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCEEEEECCCCHHHHCC GRNEVHLEVWVENQWGTTVTPGKAVVLLPTRDKAVELPRPAEEDIDRMFAHEVSRHAQS CCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA