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The map label for this gene is 197105977

Identifier: 197105977

GI number: 197105977

Start: 2887635

End: 2888357

Strand: Direct

Name: 197105977

Synonym: PHZ_c2516

Alternate gene names: NA

Gene position: 2887635-2888357 (Clockwise)

Preceding gene: 197105969

Following gene: 197105982

Centisome position: 72.26

GC content: 68.33

Gene sequence:

>723_bases
ATGGCGGCAGCGCCGAAACGCGAGGGTCGCCAAACGCGCGAGCAGCCGAAGCGCGGCGGCCGCCGCACGCGCGCCGAGCA
GCGGGCGACCACCGTCAAGCTGATCCTCGACACCGCCGAAGACCTCTTCGCCCAGCTCGGCTACTTCGGCGTGACCATCA
AGGACGTGGGCGACCGCATGGGCATCCACCCGGCGCTGATCCACTACTATTTCGATGGCAAGAAGGCGCTGTTCGACGCC
GTCTGGGAGCGCCGCATGGAATATGCGGTCACCACCCGGACGGCCGGGCTGGACGCCTACGAGGCCGAGGTCGGCGACCG
GCCGACGGTCGAGGGCGCGCTGCGGGCCTACTACGACCAGGCGTTCGACGTGTACATCAACGGGGACGAGGGCTGGCGCA
ACTTCGGCCGGATCTTCGCCCAGGTGAACAACGCGCCCGGCTACGGCGCCGAGAAGATGGACACCTATTTCGATCCCCTG
GTGCTGCGCCTGATCGGCCTGCTGCAGAAGGCCCTGCCCGACGCGCAGCCGGAGGACCTCTTCTGGAGTTTCCAGTTCAC
CTCGGGCGCCTATTCGCTGATCCTCTCGCGGACCGGCCGCATCGACCGCCTGTCGGGCGGATTGTGCGCGTCCGACGACT
TCGAGGCGGTCCGCGAGCGCTTCGTCACCTTCATGGCCGGCGGGTTCGAGGCGCTGTACGGGCGCAGGAAACAGGCCGGA
TAG

Upstream 100 bases:

>100_bases
CGCCGTTCCTTGACCGGGCGGGGCCGCCGCCCCATCGTTCGGCTGAATCACGGGGGACGGCGTATTCCCCCGACGCGTCG
GATCAGGAAGGCCGGAGGTC

Downstream 100 bases:

>100_bases
GCGCGCTCACGCGCCACCTCACGCCTCCTCCACCCTCGCCTGGCCCAGCCTCGCCTGACGGAGCGCCGCCCGGCGCACCT
TGCCGGCCTCGTCGCGCAGG

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Regulatory Protein Tetr; TetR Family Transcription Factor; Transcriptional Regulator PsrA; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAAAPKREGRQTREQPKRGGRRTRAEQRATTVKLILDTAEDLFAQLGYFGVTIKDVGDRMGIHPALIHYYFDGKKALFDA
VWERRMEYAVTTRTAGLDAYEAEVGDRPTVEGALRAYYDQAFDVYINGDEGWRNFGRIFAQVNNAPGYGAEKMDTYFDPL
VLRLIGLLQKALPDAQPEDLFWSFQFTSGAYSLILSRTGRIDRLSGGLCASDDFEAVRERFVTFMAGGFEALYGRRKQAG

Sequences:

>Translated_240_residues
MAAAPKREGRQTREQPKRGGRRTRAEQRATTVKLILDTAEDLFAQLGYFGVTIKDVGDRMGIHPALIHYYFDGKKALFDA
VWERRMEYAVTTRTAGLDAYEAEVGDRPTVEGALRAYYDQAFDVYINGDEGWRNFGRIFAQVNNAPGYGAEKMDTYFDPL
VLRLIGLLQKALPDAQPEDLFWSFQFTSGAYSLILSRTGRIDRLSGGLCASDDFEAVRERFVTFMAGGFEALYGRRKQAG
>Mature_239_residues
AAAPKREGRQTREQPKRGGRRTRAEQRATTVKLILDTAEDLFAQLGYFGVTIKDVGDRMGIHPALIHYYFDGKKALFDAV
WERRMEYAVTTRTAGLDAYEAEVGDRPTVEGALRAYYDQAFDVYINGDEGWRNFGRIFAQVNNAPGYGAEKMDTYFDPLV
LRLIGLLQKALPDAQPEDLFWSFQFTSGAYSLILSRTGRIDRLSGGLCASDDFEAVRERFVTFMAGGFEALYGRRKQAG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27027; Mature: 26896

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAPKREGRQTREQPKRGGRRTRAEQRATTVKLILDTAEDLFAQLGYFGVTIKDVGDRM
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHC
GIHPALIHYYFDGKKALFDAVWERRMEYAVTTRTAGLDAYEAEVGDRPTVEGALRAYYDQ
CCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHC
AFDVYINGDEGWRNFGRIFAQVNNAPGYGAEKMDTYFDPLVLRLIGLLQKALPDAQPEDL
CEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FWSFQFTSGAYSLILSRTGRIDRLSGGLCASDDFEAVRERFVTFMAGGFEALYGRRKQAG
EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCHHCCCC
>Mature Secondary Structure 
AAAPKREGRQTREQPKRGGRRTRAEQRATTVKLILDTAEDLFAQLGYFGVTIKDVGDRM
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHC
GIHPALIHYYFDGKKALFDAVWERRMEYAVTTRTAGLDAYEAEVGDRPTVEGALRAYYDQ
CCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHC
AFDVYINGDEGWRNFGRIFAQVNNAPGYGAEKMDTYFDPLVLRLIGLLQKALPDAQPEDL
CEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FWSFQFTSGAYSLILSRTGRIDRLSGGLCASDDFEAVRERFVTFMAGGFEALYGRRKQAG
EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA