| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105948
Identifier: 197105948
GI number: 197105948
Start: 2851659
End: 2853014
Strand: Direct
Name: 197105948
Synonym: PHZ_c2487
Alternate gene names: NA
Gene position: 2851659-2853014 (Clockwise)
Preceding gene: 197105944
Following gene: 197105952
Centisome position: 71.36
GC content: 70.8
Gene sequence:
>1356_bases ATGAAAAAGGCGCGGACCGCGACCGTTGATAACAGCGGGCTCCTGCATAGGCGGAAAGCGAGGTCGTCCGTGTCCAGGAG ACTCCTATGCGCGACGGCTTCGGCCGCAGCGCTCACCCTGGCCGGCTGGAGCACGGCCGCCAGCGCCCAGGCTCCCGCCG CCCCCGACGCGCGCATCGAGGCCCTACAGGGCCAGCTCGCCCGCCAGGCGGCCCAGCTCGCCGAACAGCAGCAGGCCCTG GCCGAGCAGCAGGCGGCGCTGGAACGCCAGCGCGTCGAGCTGGAACGCCTGCAGGCCCTCTCCGAGGCGGTGCTCGGCGC CGCCTACGGCCGCGGGCAGCCGGCCGCTGGGCCGGCCGCGGCGCCGGCTGGGCCGCCCCCGCCGGTGCAGACCGTCCCGC CCTCGCCGCCCAAGGTCGGCGCGCCGCCCCCGGAGGAGGCGCCGCGGGTCGACATCTCCGCCGTGCCGGAGGGCTACGGG GTGCTGACCCCGCGCAACCACTGGGTCGTGGAGCCCTCGATCGATTTCACGCACGGCTCGGCCAACCGCCTGGTGTTCCG CGGGGTCGAGATCGTCACCGGCATCCAGATCGGCGTCATCGAGGCGAGCGACGCCGACCGCAACGCGGTCTCGGGCGCGC TGGCGGTGCGCTACGGCCTGACCGACCGGCTCGAGGTGGAGGGCCGGGTGCCCTACCTCTATCGGGACGACCGGGTGACC ACCCTCGCCCAGCGCGACGAGACGATCACCCGCACGTTCACCCTGCAGGGACAGGACATCGGCGACGTGGAGCTGGCCGC GCGCTACCAGATCAACGACGGCCGGCGCGGCTGGCCGATCTTCATCGCCGGCCTGCGCTACAAGTCCGACACCGGCACGA GCCCGTTCGAGATCGAGCGCGACCAGTTCGGCGTGGCGACCGAGCTGGCGACGGGATCGGGTTTCTGGGGCCTCGAGGGC TCGCTGAGCTTCCTCTATCCCACCGATCCGGTGGTGATCTTCGGCGGGCTGAGCTACCTCTCGCATCAGCCGAAGGACAT CAACAAGGTGGTCGGCGAGGTGCTGGTCCGGAAGGTCGACCCGGGCGACACGATCGGCCTGAACGCCGGCTTCGGCTTCG CGCTCAATCCCCGCTTCTCGTTCTCGCTGGGCTACAAGCACAGCTACATCTTCCCGACCAAGTCCGTGTACGGGAACACG CTGCAGGAATCCGACAGCCTGCAGGTCGGCGCCTTCACCTTCGGGTGGTCCTACGCGCTGACCGACCGGATCTCGATCAG CAACGCCTACGAGCTGGGGACCACCAGCGATGCGCCCGACATGCGCATCGTGCTGCGCTTCCCGATCCGGTTCTGA
Upstream 100 bases:
>100_bases TTGTCAAAAGCCACGTCGTCCGCGTGTTTCCAGAGGCGCCTCTTTTTCTTGAAATGCGACTCCAGTTCTTCGTCGCGCCT TCGAACTTGCAACATATCTT
Downstream 100 bases:
>100_bases AGGAAGGATTCCGGGGGGCCGGGCCGGCGCGGCCGGACCGGAACGGGGCGCCGCCCCCTCGGGAAGGGCGGCCCGGCGGC CATGCGACGAAGCCGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKKARTATVDNSGLLHRRKARSSVSRRLLCATASAAALTLAGWSTAASAQAPAAPDARIEALQGQLARQAAQLAEQQQAL AEQQAALERQRVELERLQALSEAVLGAAYGRGQPAAGPAAAPAGPPPPVQTVPPSPPKVGAPPPEEAPRVDISAVPEGYG VLTPRNHWVVEPSIDFTHGSANRLVFRGVEIVTGIQIGVIEASDADRNAVSGALAVRYGLTDRLEVEGRVPYLYRDDRVT TLAQRDETITRTFTLQGQDIGDVELAARYQINDGRRGWPIFIAGLRYKSDTGTSPFEIERDQFGVATELATGSGFWGLEG SLSFLYPTDPVVIFGGLSYLSHQPKDINKVVGEVLVRKVDPGDTIGLNAGFGFALNPRFSFSLGYKHSYIFPTKSVYGNT LQESDSLQVGAFTFGWSYALTDRISISNAYELGTTSDAPDMRIVLRFPIRF
Sequences:
>Translated_451_residues MKKARTATVDNSGLLHRRKARSSVSRRLLCATASAAALTLAGWSTAASAQAPAAPDARIEALQGQLARQAAQLAEQQQAL AEQQAALERQRVELERLQALSEAVLGAAYGRGQPAAGPAAAPAGPPPPVQTVPPSPPKVGAPPPEEAPRVDISAVPEGYG VLTPRNHWVVEPSIDFTHGSANRLVFRGVEIVTGIQIGVIEASDADRNAVSGALAVRYGLTDRLEVEGRVPYLYRDDRVT TLAQRDETITRTFTLQGQDIGDVELAARYQINDGRRGWPIFIAGLRYKSDTGTSPFEIERDQFGVATELATGSGFWGLEG SLSFLYPTDPVVIFGGLSYLSHQPKDINKVVGEVLVRKVDPGDTIGLNAGFGFALNPRFSFSLGYKHSYIFPTKSVYGNT LQESDSLQVGAFTFGWSYALTDRISISNAYELGTTSDAPDMRIVLRFPIRF >Mature_451_residues MKKARTATVDNSGLLHRRKARSSVSRRLLCATASAAALTLAGWSTAASAQAPAAPDARIEALQGQLARQAAQLAEQQQAL AEQQAALERQRVELERLQALSEAVLGAAYGRGQPAAGPAAAPAGPPPPVQTVPPSPPKVGAPPPEEAPRVDISAVPEGYG VLTPRNHWVVEPSIDFTHGSANRLVFRGVEIVTGIQIGVIEASDADRNAVSGALAVRYGLTDRLEVEGRVPYLYRDDRVT TLAQRDETITRTFTLQGQDIGDVELAARYQINDGRRGWPIFIAGLRYKSDTGTSPFEIERDQFGVATELATGSGFWGLEG SLSFLYPTDPVVIFGGLSYLSHQPKDINKVVGEVLVRKVDPGDTIGLNAGFGFALNPRFSFSLGYKHSYIFPTKSVYGNT LQESDSLQVGAFTFGWSYALTDRISISNAYELGTTSDAPDMRIVLRFPIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48551; Mature: 48551
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKARTATVDNSGLLHRRKARSSVSRRLLCATASAAALTLAGWSTAASAQAPAAPDARIE CCCCCEEECCCCCCHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHH ALQGQLARQAAQLAEQQQALAEQQAALERQRVELERLQALSEAVLGAAYGRGQPAAGPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APAGPPPPVQTVPPSPPKVGAPPPEEAPRVDISAVPEGYGVLTPRNHWVVEPSIDFTHGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCEEECCCCEECCCC ANRLVFRGVEIVTGIQIGVIEASDADRNAVSGALAVRYGLTDRLEVEGRVPYLYRDDRVT CCEEEEECEEEEECEEEEEEECCCCCCHHHCCEEEEEECCCCEEEECCCCCEEEECCCEE TLAQRDETITRTFTLQGQDIGDVELAARYQINDGRRGWPIFIAGLRYKSDTGTSPFEIER EHHHCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEECC DQFGVATELATGSGFWGLEGSLSFLYPTDPVVIFGGLSYLSHQPKDINKVVGEVLVRKVD CCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHEECC PGDTIGLNAGFGFALNPRFSFSLGYKHSYIFPTKSVYGNTLQESDSLQVGAFTFGWSYAL CCCEEEECCCCCEEECCCEEEEECCCEEEECCCHHHHCCCCCCCCCEEEEEEEECEEEEE TDRISISNAYELGTTSDAPDMRIVLRFPIRF EEEEEECCCEECCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MKKARTATVDNSGLLHRRKARSSVSRRLLCATASAAALTLAGWSTAASAQAPAAPDARIE CCCCCEEECCCCCCHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHH ALQGQLARQAAQLAEQQQALAEQQAALERQRVELERLQALSEAVLGAAYGRGQPAAGPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APAGPPPPVQTVPPSPPKVGAPPPEEAPRVDISAVPEGYGVLTPRNHWVVEPSIDFTHGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCEEECCCCEECCCC ANRLVFRGVEIVTGIQIGVIEASDADRNAVSGALAVRYGLTDRLEVEGRVPYLYRDDRVT CCEEEEECEEEEECEEEEEEECCCCCCHHHCCEEEEEECCCCEEEECCCCCEEEECCCEE TLAQRDETITRTFTLQGQDIGDVELAARYQINDGRRGWPIFIAGLRYKSDTGTSPFEIER EHHHCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEECC DQFGVATELATGSGFWGLEGSLSFLYPTDPVVIFGGLSYLSHQPKDINKVVGEVLVRKVD CCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHEECC PGDTIGLNAGFGFALNPRFSFSLGYKHSYIFPTKSVYGNTLQESDSLQVGAFTFGWSYAL CCCEEEECCCCCEEECCCEEEEECCCEEEECCCHHHHCCCCCCCCCEEEEEEEECEEEEE TDRISISNAYELGTTSDAPDMRIVLRFPIRF EEEEEECCCEECCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA