Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is aguA [H]

Identifier: 197105936

GI number: 197105936

Start: 2834842

End: 2836965

Strand: Reverse

Name: aguA [H]

Synonym: PHZ_c2475

Alternate gene names: 197105936

Gene position: 2836965-2834842 (Counterclockwise)

Preceding gene: 197105939

Following gene: 197105933

Centisome position: 70.99

GC content: 71.28

Gene sequence:

>2124_bases
ATGACCCTTGGTCTGGCCTCGGAGTCCGCCTCGGGGGCCCGGGCCGAGGACGGCTACGACCTGTGGCTGCGCTACCGGCC
CGTCGAGGCGCCGGCGGCCGGGGCCTACCGGGCCGCGGCGTCCGAGCTGGTGGTCCAGGGCGGCTCTCCGACGCTGGCGG
TGGCGCGCGACGAGCTGGCGCGCGGCCTTTCGGGCATGCTGGGCCAGGCGCCGCCGCTGGCCGCGGCGCCGGGTCGCGAC
GGGACGGTGATCCTGGGCACGCCGGCGGGCTCGCCGCTGGTGGCGCGCCTGAACCTGCCGCTGGAGCCCCTTGGCCCCGA
CGGCTACCTGATCCGCAGCGTGCAGGTGGACGGCCGGCCCGCGACAGTGATCGCGGGCAACAGCGACGTCGGCGTCCTCT
ACGGCGTGTTCGATTTCCTGCGGCGGATGCAGACGCGCCAGCCCGTGGCGGGCCTCGAGGTGGCCGAGGCGCCGAAGGTG
AAGCTGCGCCTGCTGAACCACTGGGACAACCTCGACCGCCACGTCGAGCGGGGCTACTCGGGCCAGTCCATCTGGGACTG
GTGGAGGCTGCCCGACGTCCGCGATCCACGCTACGTGGACTACGCCCGCGCCAGCGCCTCGCTGGGGATCAACGGGACCG
TCCTCAACAACGTCAACGCCAAGGCCGACAGCCTGACGGCGCCCTATATCGCCAAGGCCGCGGCGGTGGCCGACGTGCTG
CGGCCCTACGGGATCAAGGTCTATCTCTCGGCTAGGTTCAGCGCCCCGATCGAGATCGGCGGGCTGAAGACCGCCGACCC
GCTGGACCCGGCCGTCCGCGCCTGGTGGAAGGCCAAGGCCGACGAGATCTACCGGACGATCCCGGACTTCGGCGGCTTCC
TGGTGAAGGCCAACTCCGAGGGCCAGCCGGGGCCGCAGGACTACGGCCGCAGCCACGCCGACGGCGCCAACATGCTGGCC
GAGGCGGTGGCGCCGCACGGCGGCGTCGTGATGTGGCGGGCCTTCGTCTATTCGAACGAGCAGCCCGAGGACCGCATCAA
GCAGGCCTACAACGAGTTCGTCCCCCTGAACGGCAAGTTCCGCGACAACGTCATCGTGCAGGTGAAGAACGGGCCGCTGG
ACTTCCAGCCGCGCGAGCCGTTCCACCCCCTGTTCGGGGCCACCCCGAAGACGCCGCTGATGATGGAATTCCAGATCACC
AAGGAATACCTCGGCTTCTCTACCCACCTCGTCTACCAGGGCCCGCTCTACGAGGAGACGCTGGCCGCCGACACCTGGCG
CAAGGGGCAGGGCTCCACCGTCGCCAAGGTGGTGGACGGCTCGCTCTTCGGCCACGCGCTCACCGGCATGGCCGGCGTGG
CCAACGTCGGCTCGGACCGCAACTGGTCGGGCTCGCACTTCGACCAGGCCAACTGGTACGCCTTCGGTCGCCTCGCCTGG
GACCCGGAACTGTCCTCGCGGGCGATCGCGCAGGAGTGGGCGCGGATGACGTTCTCGAACGATCCCCGCTTCCTGGAGCC
GGTGGTCGGGATGATGATCGCCTCGCGCGAGACGGTGGTGGACTACATGACCCCGCTCGGCCTGCACCACCTGATGGGCG
AGGGGCACCACTACGGTCCGGCCCCGTGGGTGGCCGGCGGGCCGCGGGCGGACTGGACCTCGGTCTACTTCCACCGCGCT
TCGCCCGAGGGGATCGGCTTCGACCGCATGGCGAGCGGCAGCAACGCCGTGGCCCAGTACGCCCCCGAGGCGGGCCGGGC
GCTCGCCGCCGACGAGAAGAACCTGCTGTGGTTCCACCGCGTCCCCTGGGACCAGCGGGTGAGCTCGGGCCGCACGCTGT
GGGACGAGCTGGTGGTCCGCTACACGAAGGGCGTGGAGGAGGTTTCGGCGATGCGCCGCACCTGGGCGTCCATGAAGCCC
TACGTGGACCCGCAGCGCCACGCCGAGGTGGCCGCCTACCTCGCCGTCCAGGAGCAGGAGGCGCAGTGGTGGCGCGACGC
CTGCATCGCCTACTTCCAGACCTTCTCGAAGCGCCCGCTGCCGGCCGGCTACGCCCCGCCCGCCCATTCGCTGGACTATT
ACCGCTCGCTCGAATTCCCCTACGCCCCGGGCCGCGGAGACTGA

Upstream 100 bases:

>100_bases
CTCGGGCCCGGTGTTGTCAATCACATGGTCAGACCACTAGAAGGGTGGTGTCTGGACCTCTGGAGGCGGCATGAAGAAGT
TCGCACTGCTCGCGTCGGCG

Downstream 100 bases:

>100_bases
TCCTCGCCCCTGGCCGCGCCTCGGCCCCGCGGGGGAGGGGCGCGGTCGCGGCGTTCCTCCCAGGCAAAAGGAAAGGGCGG
CCGGCCTTTCGGCCCGCCGC

Product: alpha-glucuronidase

Products: NA

Alternate protein names: Alpha-glucosiduronase [H]

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRD
GTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKV
KLRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL
RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLA
EAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQIT
KEYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW
DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRA
SPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKP
YVDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD

Sequences:

>Translated_707_residues
MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRD
GTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKV
KLRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL
RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLA
EAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQIT
KEYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW
DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRA
SPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKP
YVDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD
>Mature_706_residues
TLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELARGLSGMLGQAPPLAAAPGRDG
TVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRPATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVK
LRLLNHWDNLDRHVERGYSGQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVLR
PYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSEGQPGPQDYGRSHADGANMLAE
AVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKFRDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITK
EYLGFSTHLVYQGPLYEETLAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAWD
PELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGPAPWVAGGPRADWTSVYFHRAS
PEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHRVPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPY
VDPQRHAEVAAYLAVQEQEAQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD

Specific function: Releases 4-O-methylglucuronic acid from substituted xylo-oligosaccharides [H]

COG id: COG3661

COG function: function code G; Alpha-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 67 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011395
- InterPro:   IPR005154
- InterPro:   IPR011099
- InterPro:   IPR011100
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07477 Glyco_hydro_67C; PF07488 Glyco_hydro_67M; PF03648 Glyco_hydro_67N [H]

EC number: =3.2.1.139 [H]

Molecular weight: Translated: 77716; Mature: 77585

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELA
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEEHHHHH
RGLSGMLGQAPPLAAAPGRDGTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRP
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC
ATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVKLRLLNHWDNLDRHVERGYS
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
GQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL
CCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH
RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSE
CCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GQPGPQDYGRSHADGANMLAEAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKF
CCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCC
RDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITKEYLGFSTHLVYQGPLYEET
CCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCEEEEEEECCCHHHH
LAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW
HHHHCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGP
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
APWVAGGPRADWTSVYFHRASPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHR
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCCCCEEECCCCCEEEEEE
VPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPYVDPQRHAEVAAYLAVQEQE
CCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TLGLASESASGARAEDGYDLWLRYRPVEAPAAGAYRAAASELVVQGGSPTLAVARDELA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEEHHHHH
RGLSGMLGQAPPLAAAPGRDGTVILGTPAGSPLVARLNLPLEPLGPDGYLIRSVQVDGRP
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC
ATVIAGNSDVGVLYGVFDFLRRMQTRQPVAGLEVAEAPKVKLRLLNHWDNLDRHVERGYS
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
GQSIWDWWRLPDVRDPRYVDYARASASLGINGTVLNNVNAKADSLTAPYIAKAAAVADVL
CCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH
RPYGIKVYLSARFSAPIEIGGLKTADPLDPAVRAWWKAKADEIYRTIPDFGGFLVKANSE
CCCCEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GQPGPQDYGRSHADGANMLAEAVAPHGGVVMWRAFVYSNEQPEDRIKQAYNEFVPLNGKF
CCCCCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCC
RDNVIVQVKNGPLDFQPREPFHPLFGATPKTPLMMEFQITKEYLGFSTHLVYQGPLYEET
CCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCEEEEEEECCCHHHH
LAADTWRKGQGSTVAKVVDGSLFGHALTGMAGVANVGSDRNWSGSHFDQANWYAFGRLAW
HHHHCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
DPELSSRAIAQEWARMTFSNDPRFLEPVVGMMIASRETVVDYMTPLGLHHLMGEGHHYGP
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
APWVAGGPRADWTSVYFHRASPEGIGFDRMASGSNAVAQYAPEAGRALAADEKNLLWFHR
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCCCCEEECCCCCEEEEEE
VPWDQRVSSGRTLWDELVVRYTKGVEEVSAMRRTWASMKPYVDPQRHAEVAAYLAVQEQE
CCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AQWWRDACIAYFQTFSKRPLPAGYAPPAHSLDYYRSLEFPYAPGRGD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9044261; 10360571 [H]