| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105931
Identifier: 197105931
GI number: 197105931
Start: 2827548
End: 2828690
Strand: Reverse
Name: 197105931
Synonym: PHZ_c2470
Alternate gene names: NA
Gene position: 2828690-2827548 (Counterclockwise)
Preceding gene: 197105933
Following gene: 197105930
Centisome position: 70.78
GC content: 72.44
Gene sequence:
>1143_bases ATGGGCAGAGCCGCCGAGCGGCCGCAAGCCTTTCTGCCCGCCGACTGGCCGGCCGCCACGCTGGTCGGCCGCATCCGGAC CGCCGAAGGCCCCACGCCCGTGCTCTGCCGCAATGGCCGGCTGTTCGACGTCTCGGCCGCCGCCACCGTGGCCGACCTGC TGAACGGCTGGCCGCAGGCCCCGGCGGGGCGGGATCTAGGGCCCGTCGAGGACTTCGATTTCGATCGCAATCCGCTGCTG GCCCCCGTCGACCTGCAGTGCGTCAAGGCGGCGGGCGTCACCTTCGCCGTCTCGGCCGTGGAGCGCGTGATCGAGGAGCG CGCGCGGGGCGACGCCGCTAGGGCCGAGGCCATCCGCGCCGACCTGCGCGACCGCGTGGGCGCCGACATCCGCGCGGTCA CTCCGGGTTCCGAGGCCGCCGCCCGCCTGAAGGCGGCGCTGATCGCCGAGGGGCTGTGGTCGCAGTACCTGGAGGTCGCC ATCGGCCCCGACGCCGAGATCTTCACCAAGGCGCCGATCCTGTCCGCGGTCGGCCACGGCGCCCAGGTCGGCGTCCGTTC GGATTCGGCCTGGAACAATCCCGAGCCCGAGGTGGCGCTGGTCTGCGACAGCGCGGGCCGGGCGCTGGGCGCCACCCTGG GCAACGACGTCAACCTGCGCGACTTCGAGGGGCGCAGCGCCCTGCTGCTGGGCAAGGCCAAGGACAACAACGCCTCGTGC GCGCTCGGCCCGTTCGTCCGCCTGTTCGATGAGGGCTTCACCATCGACGATGTGCGCACGGCGCGCGTGGATCTCGTCAT CGAGGGGCCGGACAACTACCGCCTCGAGGGGCACAGCTCGATGGACCAGATCAGCCGCGATCCCCTCGACCTCGTGCGCC AGGCCATGAGCGAGCACCAGTATCCGGACGGCTTCGTCCTGTTCTGCGGCACCCTCTTCGCGCCCACCCAGGACCGCGAC GCCCCCGGCCAGGGCTTCACACACAAGGTGGGCGACGTCGTGCGGGTCGCGAGCCCCCGCCTGGGCGTTCTCGAAAACGA GGTGACGACCTCGAAGGCCGCGCCGCCGTGGACGTTCGGCGTCGGCGACCTGATGCGTAACCTGGCCGGCCGCGGCCTGC TTTCGGCGGAGACCGCCCAGTGA
Upstream 100 bases:
>100_bases CCTCGTGCTTCCCAGGCTCCTTGAGGCGGCCCGGCTGACGCCCACCTTGACAGGTGAGGGGCGAGATTGATAGCGCTACC AAAAATAGGGAGGTCTGACC
Downstream 100 bases:
>100_bases CGAAGTCCACGACCCAGACCCTGGCGCACTTCATCGGGGGCGAACGCGTCGCCGCCGATGCGCCCGAGGAGAGCCTGAAC CCCTCCAACACCAACGACGT
Product: fumarylacetoacetate (FAA) hydrolase family protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxy-D-Arabinonate Dehydratase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MGRAAERPQAFLPADWPAATLVGRIRTAEGPTPVLCRNGRLFDVSAAATVADLLNGWPQAPAGRDLGPVEDFDFDRNPLL APVDLQCVKAAGVTFAVSAVERVIEERARGDAARAEAIRADLRDRVGADIRAVTPGSEAAARLKAALIAEGLWSQYLEVA IGPDAEIFTKAPILSAVGHGAQVGVRSDSAWNNPEPEVALVCDSAGRALGATLGNDVNLRDFEGRSALLLGKAKDNNASC ALGPFVRLFDEGFTIDDVRTARVDLVIEGPDNYRLEGHSSMDQISRDPLDLVRQAMSEHQYPDGFVLFCGTLFAPTQDRD APGQGFTHKVGDVVRVASPRLGVLENEVTTSKAAPPWTFGVGDLMRNLAGRGLLSAETAQ
Sequences:
>Translated_380_residues MGRAAERPQAFLPADWPAATLVGRIRTAEGPTPVLCRNGRLFDVSAAATVADLLNGWPQAPAGRDLGPVEDFDFDRNPLL APVDLQCVKAAGVTFAVSAVERVIEERARGDAARAEAIRADLRDRVGADIRAVTPGSEAAARLKAALIAEGLWSQYLEVA IGPDAEIFTKAPILSAVGHGAQVGVRSDSAWNNPEPEVALVCDSAGRALGATLGNDVNLRDFEGRSALLLGKAKDNNASC ALGPFVRLFDEGFTIDDVRTARVDLVIEGPDNYRLEGHSSMDQISRDPLDLVRQAMSEHQYPDGFVLFCGTLFAPTQDRD APGQGFTHKVGDVVRVASPRLGVLENEVTTSKAAPPWTFGVGDLMRNLAGRGLLSAETAQ >Mature_379_residues GRAAERPQAFLPADWPAATLVGRIRTAEGPTPVLCRNGRLFDVSAAATVADLLNGWPQAPAGRDLGPVEDFDFDRNPLLA PVDLQCVKAAGVTFAVSAVERVIEERARGDAARAEAIRADLRDRVGADIRAVTPGSEAAARLKAALIAEGLWSQYLEVAI GPDAEIFTKAPILSAVGHGAQVGVRSDSAWNNPEPEVALVCDSAGRALGATLGNDVNLRDFEGRSALLLGKAKDNNASCA LGPFVRLFDEGFTIDDVRTARVDLVIEGPDNYRLEGHSSMDQISRDPLDLVRQAMSEHQYPDGFVLFCGTLFAPTQDRDA PGQGFTHKVGDVVRVASPRLGVLENEVTTSKAAPPWTFGVGDLMRNLAGRGLLSAETAQ
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40399; Mature: 40268
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAAERPQAFLPADWPAATLVGRIRTAEGPTPVLCRNGRLFDVSAAATVADLLNGWPQA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEECHHHHHHHHHHCCCCCC PAGRDLGPVEDFDFDRNPLLAPVDLQCVKAAGVTFAVSAVERVIEERARGDAARAEAIRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH DLRDRVGADIRAVTPGSEAAARLKAALIAEGLWSQYLEVAIGPDAEIFTKAPILSAVGHG HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCHHHHHHCCC AQVGVRSDSAWNNPEPEVALVCDSAGRALGATLGNDVNLRDFEGRSALLLGKAKDNNASC CEEEECCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEECCCCCEEEEEECCCCCCCE ALGPFVRLFDEGFTIDDVRTARVDLVIEGPDNYRLEGHSSMDQISRDPLDLVRQAMSEHQ EHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCCCHHHHCCCHHHHHHHHHHHCC YPDGFVLFCGTLFAPTQDRDAPGQGFTHKVGDVVRVASPRLGVLENEVTTSKAAPPWTFG CCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VGDLMRNLAGRGLLSAETAQ HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GRAAERPQAFLPADWPAATLVGRIRTAEGPTPVLCRNGRLFDVSAAATVADLLNGWPQA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEECHHHHHHHHHHCCCCCC PAGRDLGPVEDFDFDRNPLLAPVDLQCVKAAGVTFAVSAVERVIEERARGDAARAEAIRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH DLRDRVGADIRAVTPGSEAAARLKAALIAEGLWSQYLEVAIGPDAEIFTKAPILSAVGHG HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCHHHHHHCCC AQVGVRSDSAWNNPEPEVALVCDSAGRALGATLGNDVNLRDFEGRSALLLGKAKDNNASC CEEEECCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEECCCCCEEEEEECCCCCCCE ALGPFVRLFDEGFTIDDVRTARVDLVIEGPDNYRLEGHSSMDQISRDPLDLVRQAMSEHQ EHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCCCHHHHCCCHHHHHHHHHHHCC YPDGFVLFCGTLFAPTQDRDAPGQGFTHKVGDVVRVASPRLGVLENEVTTSKAAPPWTFG CCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VGDLMRNLAGRGLLSAETAQ HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA