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The map label for this gene is peh [H]

Identifier: 197105923

GI number: 197105923

Start: 2816815

End: 2818221

Strand: Direct

Name: peh [H]

Synonym: PHZ_c2462

Alternate gene names: 197105923

Gene position: 2816815-2818221 (Clockwise)

Preceding gene: 197105922

Following gene: 197105932

Centisome position: 70.49

GC content: 71.22

Gene sequence:

>1407_bases
ATGCTGCGCCGGACGCTGCTGGCGGGCCTCGCGGCGCTTTCGCTCGCCCTCCCGGCCCAGGCCCTCCCAGCCCAGGCCCT
CCCAGGCCGCGCCGAGTCCGACCCGGAGATGTGGCGGGCCGCCGAGGCCATGGCGGCGTCGATCGAGGCGCCGCGCATCC
CGGACCGCGGCTTCGATCCCGCCCGCTTCGGCGGCAGGGCCGACGGGCGGAGCGACGCGCGCCCGGCGATCCAGAAGGCC
ATCGATGCGGCCCACCGCGCCGGCGGCGGCCGGGTGACGCTGTCGCCCGGCGTCTGGTTCTCAAGGGGCCCGGTCCGGCT
GAAGAGCCACGTCGAGCTGCGGGTGGAGGCGGGCGCCACCCTGCTCTTCTCGCCCGAGCCGGACGACTACCTGCCTCCAG
TGAAGACCCGCTGGGAAGGAACCGAGGTCTACACCTACTCGCCCTTCATCTACGCCGCGGGCGTCGAGGACGTGGCGATC
ACCGGCGGGGGCGTCATCGACGGCAATGCGCAGAGCCGCTTCCACGCCTGGCACAACCTGGCCGAGCCCGACTTCCAGCG
CCTGCGCCGGATGGGGTTCGAGGGCGTGCCGGTGGCGCAGCGCCGCTTCGGCAAGGGGACCCACCTGCGCCCGCCGCTGA
TCCAGGTGTTCGGCGGCAAGCGCGTCCGCCTGGAGGGCTTCACCGCCAGGAACTCGCCGTTCTGGGTGAACCATCTGGTC
TACGCCGACGAGGTGGTCGTGCGCGGGATCACCGTGGACAGCCACTTCCCCAACAACGATGGCGTCGACGTGGAGTCCTC
CACCCGCGTGCTGATCGAAAACAGCCGTTTCCGCACCGGCGACGACAGCGTGGTCATCAAGTCGGGCCGCGACCTCGACG
GGCGGCGCATCGGCCGGCCCAGCGCCTGGGTGCTGGTGCGGGGCAACGATATGGGCGGCGAGGACGGCATCGCCCTGGGC
AGCGAGATGTCGGGCGGCGTCCACGACGTGTTCTTCACCGACAACGTGCTGCGCAAGGGGCTGTCGGCGATCCGCTTCAA
GGCCAACCTCGACCGCGGCGGCACGGTGGAGCGCGTGCGCGTGCGCAACATGACCGTGGAGGACTTCGGCACGCTGTTCT
GGTTCCAGCTCAACTACCCCGGCGAGCTGGGCGGGAACTTCCCCTCGACCTACCGCGACATCGTTTTCGAGAACTTCAAG
GTGGGCGGCGCCGGCACGTTCTTCGAAGCCCACGCGCCGGCGCAGGCGCCGCTGAAGGACGTGGTGCTGCGCAACATCGT
CGTGCGCGAGGCCAAGGTCCCCTGGGTGCTGGAGAACGTCGAGCGGCTGACGCTGGAGAGCGTGGTGCTCGGCGGGCAGC
GCTTCGACGGCGAGCTGAAGGCTCAGGTGGTTGGGTCGGCCCGGTAG

Upstream 100 bases:

>100_bases
CCATCGTCCGCCACGTCGAGGGGCTGAAGCTCACGAACGTGCGGGTGAACGGCAAGGTCGTCCGCGACCTGACGGCGCCG
GTCTGATGGGGGGGTGTCCG

Downstream 100 bases:

>100_bases
TCCCGCTCGGCGTACTCGAACCAGTCGAAGTCGGCCGGCCTGCCCGCCCCCGACGTGTCCTGGCAGCAGACTCCGACGAA
GGCGCCGGTGAAGTTGGGCG

Product: exo-poly-alpha-D-galacturonosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLRRTLLAGLAALSLALPAQALPAQALPGRAESDPEMWRAAEAMAASIEAPRIPDRGFDPARFGGRADGRSDARPAIQKA
IDAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGATLLFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAI
TGGGVIDGNAQSRFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLV
YADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGEDGIALG
SEMSGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFK
VGGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDGELKAQVVGSAR

Sequences:

>Translated_468_residues
MLRRTLLAGLAALSLALPAQALPAQALPGRAESDPEMWRAAEAMAASIEAPRIPDRGFDPARFGGRADGRSDARPAIQKA
IDAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGATLLFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAI
TGGGVIDGNAQSRFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLV
YADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGEDGIALG
SEMSGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFK
VGGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDGELKAQVVGSAR
>Mature_468_residues
MLRRTLLAGLAALSLALPAQALPAQALPGRAESDPEMWRAAEAMAASIEAPRIPDRGFDPARFGGRADGRSDARPAIQKA
IDAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGATLLFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAI
TGGGVIDGNAQSRFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLV
YADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGEDGIALG
SEMSGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFK
VGGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDGELKAQVVGSAR

Specific function: Involved in maceration and soft-rotting of plant tissue [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 28 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 51221; Mature: 51221

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRTLLAGLAALSLALPAQALPAQALPGRAESDPEMWRAAEAMAASIEAPRIPDRGFDP
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
ARFGGRADGRSDARPAIQKAIDAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGAT
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEECCCCEEEECEEEEEEECCEE
LLFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAITGGGVIDGNAQSRFHAWHNL
EEECCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEEEECCEEEECCCCHHHHHHHCC
AEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLV
CCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEE
YADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRP
EECEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
SAWVLVRGNDMGGEDGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVR
CEEEEEECCCCCCCCCEEECCCCCCCEEEEEECHHHHHCCHHHEEEEECCCCCCCEEEEE
VRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFKVGGAGTFFEAHAPAQAPLKD
EECCCHHHCCEEEEEEECCCHHCCCCCCHHHHHHHHHCEEECCCCCEEECCCCCCCCHHH
VVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDGELKAQVVGSAR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLRRTLLAGLAALSLALPAQALPAQALPGRAESDPEMWRAAEAMAASIEAPRIPDRGFDP
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
ARFGGRADGRSDARPAIQKAIDAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEAGAT
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEECCCCEEEECEEEEEEECCEE
LLFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAITGGGVIDGNAQSRFHAWHNL
EEECCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEEEECCEEEECCCCHHHHHHHCC
AEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHLV
CCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEE
YADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRP
EECEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
SAWVLVRGNDMGGEDGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVR
CEEEEEECCCCCCCCCEEECCCCCCCEEEEEECHHHHHCCHHHEEEEECCCCCCCEEEEE
VRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFKVGGAGTFFEAHAPAQAPLKD
EECCCHHHCCEEEEEEECCCHHCCCCCCHHHHHHHHHCEEECCCCCEEECCCCCCCCHHH
VVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDGELKAQVVGSAR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2215211; 8074530; 8407675 [H]