| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105887
Identifier: 197105887
GI number: 197105887
Start: 2766334
End: 2767743
Strand: Reverse
Name: 197105887
Synonym: PHZ_c2426
Alternate gene names: NA
Gene position: 2767743-2766334 (Counterclockwise)
Preceding gene: 197105889
Following gene: 197105886
Centisome position: 69.26
GC content: 67.02
Gene sequence:
>1410_bases ATGGCGCGTCGCAAGAAGCGCGATCCAATTGCCGCGATTTTCACGCCGAAGCATCCATACCTGCCGGGGACGGAGATCCT CAGGCAGATCGACGTCGACCTGCTCGCAGAACAGCTCGACGTCGACGCCCAGGGTGCGCGGGATGGCGCCGATGCAATCC CGCCGGCGGACGGCCGCACCCTCGCGCTGAAAGAGCGTGAGATCGTCGGCCGTCTCCGTGAGCTCTGGGACGAAAACGTC GAAGGCGTGCGGCGGGCCTATGAGGGTTATCGCAGTCGCTTCGCCAGCTACACCGGTGACGCGGACCTCGATTCCCTGAC CGCCGAGCCCGCCGCAGTGGCGGTGAAGCTCCGTGAGGCCGCTCGAGAGGAGCGCTCGCTCCTCGTCGAGGAGTATAAGG CCGTGAAGATCGCGCGAGATGATCTGGAGTCTTTCCGGCGTCGCGAAGGGATCACACACGCACCGCGTCACAACCAGCAC GTCCTGGTGAAGCTGGCGATGCTCGGTGGGGCCGCCGTGCTCGAAATCGGCGTCAACGCCGCGATCTTCGCCGGCGCCGA TGCGGGCGGGATCCTCGGCGCTGTCCTGAAGGTGGCGGTCATTCCAGTCGCCAACATCGGCGGCAACTGGCTCTGGACGC ACTGGCTGACGCGCAATGTGCTGATGCGCCACTGGATGCGCAGAGCCGTCGGCGTGTTCGGCGCGCTGCTCACCGCGTTC TGGCTGATCTACCTCAATCTGGCCGTCGCGCACTGGCGCGAAGGCGCAGAGGCCGCCCTCTCGATGGAAGCCGCGACGAC GGCAGTCGGTCGCGCGTTCTCTGACCCATTCGGCCTGCAGAGTTTCGAGGCCTGGGGGCTGTTTCTGATCGGCTGCTTCG CGGGCGCGGTCGCCATCTACGAAGGGTGGGCCTGGAAGGATCCATTTCCTGGCTACACGCGCCGGGCCGAACTCGCCGAC CGACTCCTCGCTGACTGGCACCACAACCGGCAGGACGCGATGGCGCGGCTCGAAGAGATCCGCAGCGAGAACACCGAGCG CCTTGCAGATGCACAGCGACGCGCTGGCCTCGCTGTGTCGGAGCGGCCGGACATCGCAGGCAAGGCGGCGGGCCTGAGCG AAGATGTGCGGCTCTACGCAGATCACCTCCGTTATGTCTGCGAAGAGCTCGGCGCCCGATATCGAGAGGCGAACCTTCGG GCTCGGACGGCGGAGCGGCCGACGCAGTTCGACGCGCCTCTGACGTTTTCCCTTGAGCTTCCCGTGCTGCCTCCGCTCGT CGTGGGGGAGTCTCCCGTCGTGGCCGGGCGGCTTTCGGAAGCCATCCGCCAGATCACCGAGGCCTATGCCGAGGCCTGTT CCAGGGTGCCGGGCGTCGAGGATCTCGAAGCCGCCGGGGGCGCCGCATGA
Upstream 100 bases:
>100_bases CCGTCCCGGCAAATTAGCGACGCCGCGGAAGTCTCCGTTGTGGCGAGCTGCGCGTTTGTGCAACTGTAGCGGTCAAGCTT CTGGGGGGAGCGAGTACCGC
Downstream 100 bases:
>100_bases GCCGACGACCCGCACGCGGCGGGAGAGGGCGCCGGCGGGGATCCGCACCGGCGCCCGTCGGCGCTGTCGTCGCCCTGTCG CTGATCGGCGTGACGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MARRKKRDPIAAIFTPKHPYLPGTEILRQIDVDLLAEQLDVDAQGARDGADAIPPADGRTLALKEREIVGRLRELWDENV EGVRRAYEGYRSRFASYTGDADLDSLTAEPAAVAVKLREAAREERSLLVEEYKAVKIARDDLESFRRREGITHAPRHNQH VLVKLAMLGGAAVLEIGVNAAIFAGADAGGILGAVLKVAVIPVANIGGNWLWTHWLTRNVLMRHWMRRAVGVFGALLTAF WLIYLNLAVAHWREGAEAALSMEAATTAVGRAFSDPFGLQSFEAWGLFLIGCFAGAVAIYEGWAWKDPFPGYTRRAELAD RLLADWHHNRQDAMARLEEIRSENTERLADAQRRAGLAVSERPDIAGKAAGLSEDVRLYADHLRYVCEELGARYREANLR ARTAERPTQFDAPLTFSLELPVLPPLVVGESPVVAGRLSEAIRQITEAYAEACSRVPGVEDLEAAGGAA
Sequences:
>Translated_469_residues MARRKKRDPIAAIFTPKHPYLPGTEILRQIDVDLLAEQLDVDAQGARDGADAIPPADGRTLALKEREIVGRLRELWDENV EGVRRAYEGYRSRFASYTGDADLDSLTAEPAAVAVKLREAAREERSLLVEEYKAVKIARDDLESFRRREGITHAPRHNQH VLVKLAMLGGAAVLEIGVNAAIFAGADAGGILGAVLKVAVIPVANIGGNWLWTHWLTRNVLMRHWMRRAVGVFGALLTAF WLIYLNLAVAHWREGAEAALSMEAATTAVGRAFSDPFGLQSFEAWGLFLIGCFAGAVAIYEGWAWKDPFPGYTRRAELAD RLLADWHHNRQDAMARLEEIRSENTERLADAQRRAGLAVSERPDIAGKAAGLSEDVRLYADHLRYVCEELGARYREANLR ARTAERPTQFDAPLTFSLELPVLPPLVVGESPVVAGRLSEAIRQITEAYAEACSRVPGVEDLEAAGGAA >Mature_468_residues ARRKKRDPIAAIFTPKHPYLPGTEILRQIDVDLLAEQLDVDAQGARDGADAIPPADGRTLALKEREIVGRLRELWDENVE GVRRAYEGYRSRFASYTGDADLDSLTAEPAAVAVKLREAAREERSLLVEEYKAVKIARDDLESFRRREGITHAPRHNQHV LVKLAMLGGAAVLEIGVNAAIFAGADAGGILGAVLKVAVIPVANIGGNWLWTHWLTRNVLMRHWMRRAVGVFGALLTAFW LIYLNLAVAHWREGAEAALSMEAATTAVGRAFSDPFGLQSFEAWGLFLIGCFAGAVAIYEGWAWKDPFPGYTRRAELADR LLADWHHNRQDAMARLEEIRSENTERLADAQRRAGLAVSERPDIAGKAAGLSEDVRLYADHLRYVCEELGARYREANLRA RTAERPTQFDAPLTFSLELPVLPPLVVGESPVVAGRLSEAIRQITEAYAEACSRVPGVEDLEAAGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51612; Mature: 51481
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKKRDPIAAIFTPKHPYLPGTEILRQIDVDLLAEQLDVDAQGARDGADAIPPADGRT CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE LALKEREIVGRLRELWDENVEGVRRAYEGYRSRFASYTGDADLDSLTAEPAAVAVKLREA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHH AREERSLLVEEYKAVKIARDDLESFRRREGITHAPRHNQHVLVKLAMLGGAAVLEIGVNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHCCCCE AIFAGADAGGILGAVLKVAVIPVANIGGNWLWTHWLTRNVLMRHWMRRAVGVFGALLTAF EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLIYLNLAVAHWREGAEAALSMEAATTAVGRAFSDPFGLQSFEAWGLFLIGCFAGAVAIY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EGWAWKDPFPGYTRRAELADRLLADWHHNRQDAMARLEEIRSENTERLADAQRRAGLAVS CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC ERPDIAGKAAGLSEDVRLYADHLRYVCEELGARYREANLRARTAERPTQFDAPLTFSLEL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEC PVLPPLVVGESPVVAGRLSEAIRQITEAYAEACSRVPGVEDLEAAGGAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure ARRKKRDPIAAIFTPKHPYLPGTEILRQIDVDLLAEQLDVDAQGARDGADAIPPADGRT CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE LALKEREIVGRLRELWDENVEGVRRAYEGYRSRFASYTGDADLDSLTAEPAAVAVKLREA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHH AREERSLLVEEYKAVKIARDDLESFRRREGITHAPRHNQHVLVKLAMLGGAAVLEIGVNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHCCCCE AIFAGADAGGILGAVLKVAVIPVANIGGNWLWTHWLTRNVLMRHWMRRAVGVFGALLTAF EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLIYLNLAVAHWREGAEAALSMEAATTAVGRAFSDPFGLQSFEAWGLFLIGCFAGAVAIY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EGWAWKDPFPGYTRRAELADRLLADWHHNRQDAMARLEEIRSENTERLADAQRRAGLAVS CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC ERPDIAGKAAGLSEDVRLYADHLRYVCEELGARYREANLRARTAERPTQFDAPLTFSLEL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEC PVLPPLVVGESPVVAGRLSEAIRQITEAYAEACSRVPGVEDLEAAGGAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA