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The map label for this gene is soxA [H]

Identifier: 197105836

GI number: 197105836

Start: 2692785

End: 2694143

Strand: Reverse

Name: soxA [H]

Synonym: PHZ_c2375

Alternate gene names: 197105836

Gene position: 2694143-2692785 (Counterclockwise)

Preceding gene: 197105837

Following gene: 197105835

Centisome position: 67.42

GC content: 69.39

Gene sequence:

>1359_bases
ATGACGGACGTCCTTGTCATCGGGGCCGGTCCGGCCGGCATGTCCGCCGCCCTGGACCTGCAGGCCAGGGGCTTTTCCGT
CACCGTCGTCGACGATCAGCCGGCGCCCGGCGGGCGCATCTTCGCTGCAATCGAAACCCGCGAAGCGAAGACAGCGGAAG
AACAGGGCGGCGCCGCGCTGGTCACGCGGTTCCGCCATGGTGGGGGAGACTATCTGCCTTCGACCGAAGTCTGGCAGATC
GAGGGCGGGCCGAGGGTGTTCCTGTCCAGCGGGGGTGAGGCGCGGATGCTGGAACCGGCGTTCGTGGTGTTCGCCACGGG
CGCTCAGGAGCGGCCGATGCCGTTCCCTGGATGGCAGTTGCCCGGGGTGATGACAGTCGGGGCCGCGCAGATCCTGCTCA
AGACCGCCAGGCAGATCCCGGATCGTCCGGTCTGGCTTGCGGGCAGCGGTCCGCTGCTGCTGCTGTACATCCAGCAGCTC
GTCGACGCGGGCGGAGAGGTGGCCGGCGTCATCGACACGACGCCGCCTGGACGCGCTGTGGCAGCCGCCCCGCATCTGCT
CGGAGCCCTCCGCTATGGCGCCGCGGATCTGATCCGCGGCCTGAACTGGCTGCTGCCGCGCTCGCGGCGGCGGATCATCC
GCGGCGTCGTAGCGCTCGAAGCGCTCGGTTCCGAACGGCTGACGGGAGTGCGCTATAAGACGCGCGGCGGACGGACGGGT
GAGATCCCGACCGAGCATCTGCTCGTCCACGACGGCGTCATCCCGGGGGTTCACGCGACCCTCGCCGCCGGCTGCGAGCA
TCAGTGGAACGTTTCGCAGCGGGCATTCGAGCCTGTGACGGATGGCTACGGCGCGACGTCGAAACCGTCGATCTTTGTCG
CGGGCGACGCGGCGACGATCGGCGGAGCTCGTATGGCGCCAGTGTCAGGCCGTCTGGCCGCAATCGGCGTCGCAAGGGCG
GCCGGCAAGCTCTCACCGAGGGAGGCGGAGGCCGAAGCGGCGCCGCTTCGCCGGACGCTGGCGAACAATGCCCGTTTCCG
ACGGTTTCTCGACGCCGCGTTTCCGGGGATGACGCTGGGCATCCCAGACTCGACGATGGTCTGCCGCTGCGAAGAGGTGA
CGGCCGGGCAGGTCCGGACCGCCTTGCGAGATCGTCCTCACCTTGGTCCCGACGGTGTGAAGGCGACGACCCGTGCGGGT
ATGGGGCCGTGCCAGGGGCGGCAATGCGCGCCGACGCTCTCCCGCCTGACGGCCGAGACCCATCAGCTGCCATTTGGGGC
CGTCGGGTTCCTGAAGATCCGCCCGCCATTGAAGCCGCTGACCCTGAAGGAGCTCGCCTCCCTGGAGACTGACGCATGA

Upstream 100 bases:

>100_bases
ACGGCGAGGTGAGCAGCCGGACCTGCATGATCCGCGCGCGCCACGGCATGGTCGTCCGACGACAATCCGGCCGACCCGAT
CCTCTGAGTTCGGTCGAGCA

Downstream 100 bases:

>100_bases
GCGCCAAGGCCGACGTGCTGGTCATCGGCGGCGGCCTTCATGGCCTGTCGGCCGCCCTGCAGATCGCCCGCCGCGGGGCC
CGGGTGACCCTGCTGGAACG

Product: sarcosine oxidase, subunit alpha

Products: NA

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MTDVLVIGAGPAGMSAALDLQARGFSVTVVDDQPAPGGRIFAAIETREAKTAEEQGGAALVTRFRHGGGDYLPSTEVWQI
EGGPRVFLSSGGEARMLEPAFVVFATGAQERPMPFPGWQLPGVMTVGAAQILLKTARQIPDRPVWLAGSGPLLLLYIQQL
VDAGGEVAGVIDTTPPGRAVAAAPHLLGALRYGAADLIRGLNWLLPRSRRRIIRGVVALEALGSERLTGVRYKTRGGRTG
EIPTEHLLVHDGVIPGVHATLAAGCEHQWNVSQRAFEPVTDGYGATSKPSIFVAGDAATIGGARMAPVSGRLAAIGVARA
AGKLSPREAEAEAAPLRRTLANNARFRRFLDAAFPGMTLGIPDSTMVCRCEEVTAGQVRTALRDRPHLGPDGVKATTRAG
MGPCQGRQCAPTLSRLTAETHQLPFGAVGFLKIRPPLKPLTLKELASLETDA

Sequences:

>Translated_452_residues
MTDVLVIGAGPAGMSAALDLQARGFSVTVVDDQPAPGGRIFAAIETREAKTAEEQGGAALVTRFRHGGGDYLPSTEVWQI
EGGPRVFLSSGGEARMLEPAFVVFATGAQERPMPFPGWQLPGVMTVGAAQILLKTARQIPDRPVWLAGSGPLLLLYIQQL
VDAGGEVAGVIDTTPPGRAVAAAPHLLGALRYGAADLIRGLNWLLPRSRRRIIRGVVALEALGSERLTGVRYKTRGGRTG
EIPTEHLLVHDGVIPGVHATLAAGCEHQWNVSQRAFEPVTDGYGATSKPSIFVAGDAATIGGARMAPVSGRLAAIGVARA
AGKLSPREAEAEAAPLRRTLANNARFRRFLDAAFPGMTLGIPDSTMVCRCEEVTAGQVRTALRDRPHLGPDGVKATTRAG
MGPCQGRQCAPTLSRLTAETHQLPFGAVGFLKIRPPLKPLTLKELASLETDA
>Mature_451_residues
TDVLVIGAGPAGMSAALDLQARGFSVTVVDDQPAPGGRIFAAIETREAKTAEEQGGAALVTRFRHGGGDYLPSTEVWQIE
GGPRVFLSSGGEARMLEPAFVVFATGAQERPMPFPGWQLPGVMTVGAAQILLKTARQIPDRPVWLAGSGPLLLLYIQQLV
DAGGEVAGVIDTTPPGRAVAAAPHLLGALRYGAADLIRGLNWLLPRSRRRIIRGVVALEALGSERLTGVRYKTRGGRTGE
IPTEHLLVHDGVIPGVHATLAAGCEHQWNVSQRAFEPVTDGYGATSKPSIFVAGDAATIGGARMAPVSGRLAAIGVARAA
GKLSPREAEAEAAPLRRTLANNARFRRFLDAAFPGMTLGIPDSTMVCRCEEVTAGQVRTALRDRPHLGPDGVKATTRAGM
GPCQGRQCAPTLSRLTAETHQLPFGAVGFLKIRPPLKPLTLKELASLETDA

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 47541; Mature: 47410

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVLVIGAGPAGMSAALDLQARGFSVTVVDDQPAPGGRIFAAIETREAKTAEEQGGAAL
CCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCEEE
VTRFRHGGGDYLPSTEVWQIEGGPRVFLSSGGEARMLEPAFVVFATGAQERPMPFPGWQL
EHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCEEEEEECCCCCCCCCCCCCCC
PGVMTVGAAQILLKTARQIPDRPVWLAGSGPLLLLYIQQLVDAGGEVAGVIDTTPPGRAV
CCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
AAAPHLLGALRYGAADLIRGLNWLLPRSRRRIIRGVVALEALGSERLTGVRYKTRGGRTG
HHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
EIPTEHLLVHDGVIPGVHATLAAGCEHQWNVSQRAFEPVTDGYGATSKPSIFVAGDAATI
CCCHHEEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCEEC
GGARMAPVSGRLAAIGVARAAGKLSPREAEAEAAPLRRTLANNARFRRFLDAAFPGMTLG
CCCEECCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEC
IPDSTMVCRCEEVTAGQVRTALRDRPHLGPDGVKATTRAGMGPCQGRQCAPTLSRLTAET
CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
HQLPFGAVGFLKIRPPLKPLTLKELASLETDA
HCCCCCCEEEEEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TDVLVIGAGPAGMSAALDLQARGFSVTVVDDQPAPGGRIFAAIETREAKTAEEQGGAAL
CCEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCEEE
VTRFRHGGGDYLPSTEVWQIEGGPRVFLSSGGEARMLEPAFVVFATGAQERPMPFPGWQL
EHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCEEEEEECCCCCCCCCCCCCCC
PGVMTVGAAQILLKTARQIPDRPVWLAGSGPLLLLYIQQLVDAGGEVAGVIDTTPPGRAV
CCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
AAAPHLLGALRYGAADLIRGLNWLLPRSRRRIIRGVVALEALGSERLTGVRYKTRGGRTG
HHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
EIPTEHLLVHDGVIPGVHATLAAGCEHQWNVSQRAFEPVTDGYGATSKPSIFVAGDAATI
CCCHHEEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCEEC
GGARMAPVSGRLAAIGVARAAGKLSPREAEAEAAPLRRTLANNARFRRFLDAAFPGMTLG
CCCEECCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEC
IPDSTMVCRCEEVTAGQVRTALRDRPHLGPDGVKATTRAGMGPCQGRQCAPTLSRLTAET
CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
HQLPFGAVGFLKIRPPLKPLTLKELASLETDA
HCCCCCCEEEEEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA