| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105802
Identifier: 197105802
GI number: 197105802
Start: 2654702
End: 2655127
Strand: Direct
Name: 197105802
Synonym: PHZ_c2340
Alternate gene names: NA
Gene position: 2654702-2655127 (Clockwise)
Preceding gene: 197105800
Following gene: 197105803
Centisome position: 66.43
GC content: 75.12
Gene sequence:
>426_bases ATGGCCGCTCCCCCGCCCAAGCTGGACGCCGCCGGCGTCAACGCGCTGCTCGAGACCGCCTTCCCCGGCATCGCCGCGGG GGGACCGCAGGTCACGGAGGTGACGCCCGGACGGGTGCGCGTGGTCCGCCCGTACGGCGAAGGCCTGCTCCGGCCGGGCG GGGTGATCTCGGGCCCGACCCTGATGTCCCTGGCCGACACGGCGGCCTACGCCCTGGTCCTGGCGCACGCGGGCGACCAG CTCATGGCCGTCACCTCGCAGCTCAACATCAGCTTCCTGCGGGGCGCCGCGCCGGGCGACCTGACGGCCGAGGCCGAGAT GCTTCGGCTCGGCCGGCGGCTGGCGGTCTGCGACGTGCGGATCTGGACCGAGGGACCCGACCGGCTGGCGGCCCAGGCGA ACGTCACCTACGCTCTGCCCGGATGA
Upstream 100 bases:
>100_bases CAATCAGTATTCGCACATGAACCTTTAGTAATGATACGTCCATGTTACGCGTTTCGATAAAATACTTGTAATGATCCGGT CACCCGCGCCAGAAGGGGCC
Downstream 100 bases:
>100_bases GCCAGCCCCCCGCCCCGATCAGGACCCCGTGCATCAAGGTGTGCGTGGTGGACGGCGAGAGCGGCCTGTGCCTCGGCTGC TACCGGCGGCTGAACGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase Family Domain Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; PaaI Thioesterase Family Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAAPPPKLDAAGVNALLETAFPGIAAGGPQVTEVTPGRVRVVRPYGEGLLRPGGVISGPTLMSLADTAAYALVLAHAGDQ LMAVTSQLNISFLRGAAPGDLTAEAEMLRLGRRLAVCDVRIWTEGPDRLAAQANVTYALPG
Sequences:
>Translated_141_residues MAAPPPKLDAAGVNALLETAFPGIAAGGPQVTEVTPGRVRVVRPYGEGLLRPGGVISGPTLMSLADTAAYALVLAHAGDQ LMAVTSQLNISFLRGAAPGDLTAEAEMLRLGRRLAVCDVRIWTEGPDRLAAQANVTYALPG >Mature_140_residues AAPPPKLDAAGVNALLETAFPGIAAGGPQVTEVTPGRVRVVRPYGEGLLRPGGVISGPTLMSLADTAAYALVLAHAGDQL MAVTSQLNISFLRGAAPGDLTAEAEMLRLGRRLAVCDVRIWTEGPDRLAAQANVTYALPG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14485; Mature: 14354
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPPPKLDAAGVNALLETAFPGIAAGGPQVTEVTPGRVRVVRPYGEGLLRPGGVISGPT CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCH LMSLADTAAYALVLAHAGDQLMAVTSQLNISFLRGAAPGDLTAEAEMLRLGRRLAVCDVR HHHHHHHHHHHHHHHCCCCCEEEHHHHCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEE IWTEGPDRLAAQANVTYALPG EEECCCCCEEEECCEEEECCC >Mature Secondary Structure AAPPPKLDAAGVNALLETAFPGIAAGGPQVTEVTPGRVRVVRPYGEGLLRPGGVISGPT CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCH LMSLADTAAYALVLAHAGDQLMAVTSQLNISFLRGAAPGDLTAEAEMLRLGRRLAVCDVR HHHHHHHHHHHHHHHCCCCCEEEHHHHCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEE IWTEGPDRLAAQANVTYALPG EEECCCCCEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA