| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ybhP [C]
Identifier: 197105800
GI number: 197105800
Start: 2651817
End: 2652548
Strand: Direct
Name: ybhP [C]
Synonym: PHZ_c2338
Alternate gene names: 197105800
Gene position: 2651817-2652548 (Clockwise)
Preceding gene: 197105781
Following gene: 197105802
Centisome position: 66.36
GC content: 70.49
Gene sequence:
>732_bases ATGCCACGTATCGTCACCTACAACGTCCATCGCTGCGTCGGGAACGACCGTCGCCTGGACGTCAGCCGGATCGCCGCGGT GCTGGCGGCGCTGAACCCCGACATCGTGGCCCTGCAGGAGCTGGACGTCGGCCGGCGGCGCACGAACTACGCCGACCAGG CGCACGAGATCGCCGAACAGCTCGAGATGGCCTGCCACTTCCACGCCGCCCTGCAGGTGGAGGAGGAGCGCTACGGCGAC GCCATCCTGACCGCCTATCCCGAGCGGCTGGTGAAGGTGGGCCCCCTGCCCGGCTACGACCGGATGCGGGCGCTGGAGCC GCGCGGCGCCCTGTGGGTCGAGGTCGAGATCGGCGGCAAGCCCGTGCAGATCATCAACACCCACCTGGGCCTGATCCCGC GCGAGCAGCAGATCCAGGCCGCGCACCTGGCCGGGACCACGTGGCTCGACCATCCCGACTGCCGCTGGCCGGCGATCCTG CTGGGCGATTTCAACGCCACGGCGACCTCGGTGGTCTATCGCACCCTGACGGCCCGGCTTAAGGCCGCGCGGCGGCTGAC GCGACGGCGGACGGCGACCTCCACCTTCCCCTCTCCGCTGCCGGTGCTGCGCATCGACCACGTGTTCGTCAGCCCGGGGA TCGAGGTGCACGACGTCTTCGCCCCGTTCGATCCGCTGACCCGGGTGGCGTCGGACCACCTGCCCCTGGTCATGGACTTC GACGTGGCCTAG
Upstream 100 bases:
>100_bases CGGCGATGCAACTCCAGGTTTCCAAGCGCAACTGAAACCAAGCGCTGCGGGTTGGCAACCTTGCCAATGTCGCATTCAGC GGCCACACCTCCCCCGCCCC
Downstream 100 bases:
>100_bases CGCCGCCGGTCTAGCCCTGGGACTGCCGGTGCGCCTGGTCGGAGAGCTCGCGCGCCTCGGCGAACAGCCGCTCGCGCCGC CGGCCCAGCCGCCACGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family; Secreted Protein; Metal-Dependent Hydrolase Protein; Metallophosphoesterase; Endonuclease/Exonuclease/Phosphatase Domain Protein; Endonuclease/Exonuclease/Phosphatase Protein; Endonuclease
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGD AILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAIL LGDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF DVA
Sequences:
>Translated_243_residues MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGD AILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAIL LGDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF DVA >Mature_242_residues PRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGDA ILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILL GDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDFD VA
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27213; Mature: 27081
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQ CCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHHH LEMACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGK HHHHHHHHHHEEECHHHHCCCHHHHCCHHHHEECCCCCHHHHHHCCCCCCEEEEEEECCC PVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTARL CEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH KAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF HHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEE DVA CCC >Mature Secondary Structure PRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQ CCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHHH LEMACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGK HHHHHHHHHHEEECHHHHCCCHHHHCCHHHHEECCCCCHHHHHHCCCCCCEEEEEEECCC PVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTARL CEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH KAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF HHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEE DVA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA