Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is ybhP [C]

Identifier: 197105800

GI number: 197105800

Start: 2651817

End: 2652548

Strand: Direct

Name: ybhP [C]

Synonym: PHZ_c2338

Alternate gene names: 197105800

Gene position: 2651817-2652548 (Clockwise)

Preceding gene: 197105781

Following gene: 197105802

Centisome position: 66.36

GC content: 70.49

Gene sequence:

>732_bases
ATGCCACGTATCGTCACCTACAACGTCCATCGCTGCGTCGGGAACGACCGTCGCCTGGACGTCAGCCGGATCGCCGCGGT
GCTGGCGGCGCTGAACCCCGACATCGTGGCCCTGCAGGAGCTGGACGTCGGCCGGCGGCGCACGAACTACGCCGACCAGG
CGCACGAGATCGCCGAACAGCTCGAGATGGCCTGCCACTTCCACGCCGCCCTGCAGGTGGAGGAGGAGCGCTACGGCGAC
GCCATCCTGACCGCCTATCCCGAGCGGCTGGTGAAGGTGGGCCCCCTGCCCGGCTACGACCGGATGCGGGCGCTGGAGCC
GCGCGGCGCCCTGTGGGTCGAGGTCGAGATCGGCGGCAAGCCCGTGCAGATCATCAACACCCACCTGGGCCTGATCCCGC
GCGAGCAGCAGATCCAGGCCGCGCACCTGGCCGGGACCACGTGGCTCGACCATCCCGACTGCCGCTGGCCGGCGATCCTG
CTGGGCGATTTCAACGCCACGGCGACCTCGGTGGTCTATCGCACCCTGACGGCCCGGCTTAAGGCCGCGCGGCGGCTGAC
GCGACGGCGGACGGCGACCTCCACCTTCCCCTCTCCGCTGCCGGTGCTGCGCATCGACCACGTGTTCGTCAGCCCGGGGA
TCGAGGTGCACGACGTCTTCGCCCCGTTCGATCCGCTGACCCGGGTGGCGTCGGACCACCTGCCCCTGGTCATGGACTTC
GACGTGGCCTAG

Upstream 100 bases:

>100_bases
CGGCGATGCAACTCCAGGTTTCCAAGCGCAACTGAAACCAAGCGCTGCGGGTTGGCAACCTTGCCAATGTCGCATTCAGC
GGCCACACCTCCCCCGCCCC

Downstream 100 bases:

>100_bases
CGCCGCCGGTCTAGCCCTGGGACTGCCGGTGCGCCTGGTCGGAGAGCTCGCGCGCCTCGGCGAACAGCCGCTCGCGCCGC
CGGCCCAGCCGCCACGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family; Secreted Protein; Metal-Dependent Hydrolase Protein; Metallophosphoesterase; Endonuclease/Exonuclease/Phosphatase Domain Protein; Endonuclease/Exonuclease/Phosphatase Protein; Endonuclease

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGD
AILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAIL
LGDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF
DVA

Sequences:

>Translated_243_residues
MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGD
AILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAIL
LGDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF
DVA
>Mature_242_residues
PRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERYGDA
ILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGKPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILL
GDFNATATSVVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDFD
VA

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27213; Mature: 27081

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQ
CCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHHH
LEMACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGK
HHHHHHHHHHEEECHHHHCCCHHHHCCHHHHEECCCCCHHHHHHCCCCCCEEEEEEECCC
PVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTARL
CEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
KAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF
HHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEE
DVA
CCC
>Mature Secondary Structure 
PRIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQ
CCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHHH
LEMACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVEVEIGGK
HHHHHHHHHHEEECHHHHCCCHHHHCCHHHHEECCCCCHHHHHHCCCCCCEEEEEEECCC
PVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTARL
CEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
KAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIEVHDVFAPFDPLTRVASDHLPLVMDF
HHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEE
DVA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA