| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105781
Identifier: 197105781
GI number: 197105781
Start: 2630556
End: 2630981
Strand: Direct
Name: 197105781
Synonym: PHZ_c2319
Alternate gene names: NA
Gene position: 2630556-2630981 (Clockwise)
Preceding gene: 197105776
Following gene: 197105800
Centisome position: 65.83
GC content: 73.24
Gene sequence:
>426_bases ATGAGCCACGTCGCCACCGCCCTGGACGCCCTGCCCCGCCCGCCCTGCGCCGAGCTGCTCGGCTGGCAGGTCCTCGACGC TCGGCCCGAGCAGGGCTGGATTCGCGTCCGCTTCGAGGGGCGCCCCGAATTCCTGAACCCGGCCGGATACGTGCAGGGCG GCTTCCTGGCGGCGATGCTGGACGACACCATGGGGCCTGCGGTGTTCATCCAGTCGGACGGGCGGCTGTTCACCCCCACC ATCGACCTGCACGTCAGCTTCCTGGCGCCGGCCCGCCCCGGCCCGCTGTTCGGCGAGGGCCAGGTGATCCAGACCGGCAA GAGCATCGCCTTCCTCGAAGGCCGCCTGAGCGACGCCGACGGCGTGCTCGTCGCCCGCGGAACCGCGAGCGCCCGCCTGG TCCCCGCCGAGAAGGCGCTGGGCTAG
Upstream 100 bases:
>100_bases CCCCGCCGATCGGCAACTCCGGACCGCTACGGAGGGCGGGCGGCCGATCGCCGCGCTGCCGCCATGACGCTGTCAGCAGG ACGACCGCAGGCTGTGGGCC
Downstream 100 bases:
>100_bases GGCTTCGCCCGGAAGTCCACGTCGCTTGCAGCGGCCGCGTGGAGGAAGGCGGCCCAGACGGCGACGTTCTGCGACAGTTC CGCCGGGTCGATCTTGTCCA
Product: phenylacetic acid degradation-related protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSHVATALDALPRPPCAELLGWQVLDARPEQGWIRVRFEGRPEFLNPAGYVQGGFLAAMLDDTMGPAVFIQSDGRLFTPT IDLHVSFLAPARPGPLFGEGQVIQTGKSIAFLEGRLSDADGVLVARGTASARLVPAEKALG
Sequences:
>Translated_141_residues MSHVATALDALPRPPCAELLGWQVLDARPEQGWIRVRFEGRPEFLNPAGYVQGGFLAAMLDDTMGPAVFIQSDGRLFTPT IDLHVSFLAPARPGPLFGEGQVIQTGKSIAFLEGRLSDADGVLVARGTASARLVPAEKALG >Mature_140_residues SHVATALDALPRPPCAELLGWQVLDARPEQGWIRVRFEGRPEFLNPAGYVQGGFLAAMLDDTMGPAVFIQSDGRLFTPTI DLHVSFLAPARPGPLFGEGQVIQTGKSIAFLEGRLSDADGVLVARGTASARLVPAEKALG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14995; Mature: 14864
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVATALDALPRPPCAELLGWQVLDARPEQGWIRVRFEGRPEFLNPAGYVQGGFLAAML CCHHHHHHHHCCCCCHHHHHCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE DDTMGPAVFIQSDGRLFTPTIDLHVSFLAPARPGPLFGEGQVIQTGKSIAFLEGRLSDAD CCCCCCEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCC GVLVARGTASARLVPAEKALG CEEEECCCCCEEEECHHHCCC >Mature Secondary Structure SHVATALDALPRPPCAELLGWQVLDARPEQGWIRVRFEGRPEFLNPAGYVQGGFLAAML CHHHHHHHHCCCCCHHHHHCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE DDTMGPAVFIQSDGRLFTPTIDLHVSFLAPARPGPLFGEGQVIQTGKSIAFLEGRLSDAD CCCCCCEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCC GVLVARGTASARLVPAEKALG CEEEECCCCCEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA