| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cya [H]
Identifier: 197105753
GI number: 197105753
Start: 2595888
End: 2597069
Strand: Direct
Name: cya [H]
Synonym: PHZ_c2291
Alternate gene names: 197105753
Gene position: 2595888-2597069 (Clockwise)
Preceding gene: 197105741
Following gene: 197105754
Centisome position: 64.96
GC content: 72.34
Gene sequence:
>1182_bases ATGGAATATGCGTTCGAGACGATCACGGCCGAGCAGGCGGCGGGCGTCCAGCTCGGCGACACGCTGACGTTCAACGGCGG GCCGGCCAGCGCCGTCTCCGTCGTCTACCAGTCCTACGAGCCCCTGGCCCTGACGCCGGAAGTTCCCAGCATCCTCGTCA CCTTCGCCGGGCGGACCGTGAAGTTCGGCGTCGGCCTGACCCAGCTCTCCGACGCGGGCGCCATCGTGATGGCCGACGGC TCCAAGCTGTTCGTGGGCGACGCGGGCGACGAGCGGACCTCGGGCTCCGACCTGGGCGACGGCCTCTACGGCGGCCCCGG CCACGACGTCCTGGCGGGCTTGGGGGGCGACGACCTGATCCACGGCGGAAGCGGCGACGACCAGCTCGCCGGCGGCGCGG GCTACGACGTGATCTACGGCGGCCAGGGCGACGACGTGATCTACGGCGGCTCCACCGCGGCGGGAGAGCCCGGCGAGGCG GGCAACTTCGCCCACGGCAACCTCGGCGACGACCACGTGGTCGGCGGCGGCGGCGACGACTGGCTCTACGGCGGCCAGGG GGCCGACTTCATTGCCGGCCTGGATGGCGACGACTACCTCAGCGGCGACCTGGGCGACGACGAACTGCACGGCGGCCTCG GCGACGACAGCCTGGTCGGCGGCGGCGGGAACGACACCCTGCAGGGCGGCTTCGGGGCGGACCGCTTCGGCGGCGGCGCC GGCGACGACCTGCTGGTCGCCCAGGGTCCGGAGGGCGCCTGGATGCGGGGCGACGAGGGGAACGACACCCTCGTCACGGC CACCGCGGGCCGCGACACGCTCTACGGCGGCGAGGGGCGCGACCGGTTCGAGTTCGTGGCCAGGACCCCGCCGGGCGAAG GCGTCGATGCGGTCATCATGGACTGGGAGGCCCACGATACCCTGAACTTCGCGGACGTCAGCATCCTGTCCTCCTCGATC CTGCCGACCTCGTATTCGGAGTTCACGGCCGACAGCTACGAGCAGGCCCTCGCCATCGCCAACCAGCACATCTCGGCGGC GGGCGCGAAGTACGTGGCCGCGCAGGTGGGGGATTCCGTGGTCGTCTTCGTCGATGCGGGCGACCCGGCCGACGGGGCGG ACTCGGCCGTCCTGCTGGTCGGCCGCACCCTGGCCGACATCGGCCTGGAGAACTTCGTCTAG
Upstream 100 bases:
>100_bases CCTCCGCCTCGCCGAACATCGTTTCTCGTAAGTTGCGTTTTTACGCAACATGCGTCATCTAGGCCGTAGAGGGGCGATCG CCCAGGAGACACCGACCTTG
Downstream 100 bases:
>100_bases CCCGGATCGCCTAGCCCGGATCGTTAGCCCGGATCGCTAGCCCGGGCAGCGCATCAGGGTGATGGGGCCCGCCCAGGGGC CGCCGCTGACGGTCATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: AC-HLY; ACT; Cyclolysin; ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MEYAFETITAEQAAGVQLGDTLTFNGGPASAVSVVYQSYEPLALTPEVPSILVTFAGRTVKFGVGLTQLSDAGAIVMADG SKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEA GNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGA GDDLLVAQGPEGAWMRGDEGNDTLVTATAGRDTLYGGEGRDRFEFVARTPPGEGVDAVIMDWEAHDTLNFADVSILSSSI LPTSYSEFTADSYEQALAIANQHISAAGAKYVAAQVGDSVVVFVDAGDPADGADSAVLLVGRTLADIGLENFV
Sequences:
>Translated_393_residues MEYAFETITAEQAAGVQLGDTLTFNGGPASAVSVVYQSYEPLALTPEVPSILVTFAGRTVKFGVGLTQLSDAGAIVMADG SKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEA GNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGA GDDLLVAQGPEGAWMRGDEGNDTLVTATAGRDTLYGGEGRDRFEFVARTPPGEGVDAVIMDWEAHDTLNFADVSILSSSI LPTSYSEFTADSYEQALAIANQHISAAGAKYVAAQVGDSVVVFVDAGDPADGADSAVLLVGRTLADIGLENFV >Mature_393_residues MEYAFETITAEQAAGVQLGDTLTFNGGPASAVSVVYQSYEPLALTPEVPSILVTFAGRTVKFGVGLTQLSDAGAIVMADG SKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEA GNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGA GDDLLVAQGPEGAWMRGDEGNDTLVTATAGRDTLYGGEGRDRFEFVARTPPGEGVDAVIMDWEAHDTLNFADVSILSSSI LPTSYSEFTADSYEQALAIANQHISAAGAKYVAAQVGDSVVVFVDAGDPADGADSAVLLVGRTLADIGLENFV
Specific function: This adenylate cyclase belongs to a special class of bacterial toxin. It causes whooping cough by acting on mammalian cells by elevating cAMP-concentration and thus disrupts normal cell function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 17 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005165 - InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR018504 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF03497 Anthrax_toxA; PF00353 HemolysinCabind; PF02382 RTX [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 39467; Mature: 39467
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYAFETITAEQAAGVQLGDTLTFNGGPASAVSVVYQSYEPLALTPEVPSILVTFAGRTV CCCCCCCHHHHHHCCEEECCEEEECCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCEE KFGVGLTQLSDAGAIVMADGSKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLI EECCCCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEE HGGSGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEAGNFAHGNLGDDHVVGGGGDD ECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC WLYGGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGA CEECCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC GDDLLVAQGPEGAWMRGDEGNDTLVTATAGRDTLYGGEGRDRFEFVARTPPGEGVDAVIM CCCEEEEECCCCCEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEECCCCCCCEEEEE DWEAHDTLNFADVSILSSSILPTSYSEFTADSYEQALAIANQHISAAGAKYVAAQVGDSV ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCEE VVFVDAGDPADGADSAVLLVGRTLADIGLENFV EEEEECCCCCCCCCCEEEEECHHHHHHHHHHCC >Mature Secondary Structure MEYAFETITAEQAAGVQLGDTLTFNGGPASAVSVVYQSYEPLALTPEVPSILVTFAGRTV CCCCCCCHHHHHHCCEEECCEEEECCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCEE KFGVGLTQLSDAGAIVMADGSKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLI EECCCCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEE HGGSGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEAGNFAHGNLGDDHVVGGGGDD ECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC WLYGGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGA CEECCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC GDDLLVAQGPEGAWMRGDEGNDTLVTATAGRDTLYGGEGRDRFEFVARTPPGEGVDAVIM CCCEEEEECCCCCEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEECCCCCCCEEEEE DWEAHDTLNFADVSILSSSILPTSYSEFTADSYEQALAIANQHISAAGAKYVAAQVGDSV ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCEE VVFVDAGDPADGADSAVLLVGRTLADIGLENFV EEEEECCCCCCCCCCEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7557410; 12910271 [H]