Click here to switch to the map view.

The map label for this gene is ynjA [C]

Identifier: 197105730

GI number: 197105730

Start: 2570798

End: 2571436

Strand: Reverse

Name: ynjA [C]

Synonym: PHZ_c2268

Alternate gene names: 197105730

Gene position: 2571436-2570798 (Counterclockwise)

Preceding gene: 197105731

Following gene: 197105728

Centisome position: 64.35

GC content: 68.7

Gene sequence:

>639_bases
ATGCCCCGCCTGCGCCAGGTGTCGCGCAAGGACACCGACTCCGAGGTGATCCACAGGACCTACGACTTGCTGTTCGGCGA
CCGCGACCCGGTGGCCGAGCCCGGCACCGCCACCGGCACGTCCGGCGACTGGTGGACCGTCTTCGCCCTGGTCCCCGACT
GCCTGGACCACTGCAACCGCGGCTTCGCCTTCTACCGCAGCCCGAAGCGCAAACTGGACCCGGTGCTGCGCGAGCTGGCC
CAGACCCGCGCCGGCTGGGCCAAGGCCAGCCAGTTCGTCTTTTCCCAGCACTGCAAGTCGCTGCGCGGCCTGAAGGTTTC
CGAGGAGAAGATCGCCGCCATTCCGCACTGGCAGACCGCGGCCTGCTTCGACGAGAAGGAGCGGGCGGTGCTGGCCTACG
CCGACTGCCTGGTGCTGCAGGCCGGCCGCACCCCCGACGGGGTGTTCGGGGCGCTGAAAGGCTTCCTCTCGGACGAGGAG
ATCCTGGAGCTGACCTACATCACCTGCCTATACGACATGCATGCGGTGATGACGAAGGCGCTGCGGCTGGAGTTCGACGA
CCGCGACGACCCCATCGTCGAGGTGGCCGCGCCCGAGGACTTCAGCGCCCGAGACTTCCTGGACACGGGACGGCGCTAG

Upstream 100 bases:

>100_bases
GGGGTGATGCTGGAGTTCGCCGCGACGTTGCGCGACTTCCGCCCGGACGACGTGCGGCATGCGCCCGCCCGCGCCGTCCA
GCCCGCCGGAGCCTGAGCCC

Downstream 100 bases:

>100_bases
TCGGCCGCCTTGAGCCCCTCGCGGTAGTCGCGGGCGCGGGCGGCGCGCTTCTGCTGCCGGTAGCGGGCGTGCAGGTCGAT
CAGGGCGGCGGCGGGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPRLRQVSRKDTDSEVIHRTYDLLFGDRDPVAEPGTATGTSGDWWTVFALVPDCLDHCNRGFAFYRSPKRKLDPVLRELA
QTRAGWAKASQFVFSQHCKSLRGLKVSEEKIAAIPHWQTAACFDEKERAVLAYADCLVLQAGRTPDGVFGALKGFLSDEE
ILELTYITCLYDMHAVMTKALRLEFDDRDDPIVEVAAPEDFSARDFLDTGRR

Sequences:

>Translated_212_residues
MPRLRQVSRKDTDSEVIHRTYDLLFGDRDPVAEPGTATGTSGDWWTVFALVPDCLDHCNRGFAFYRSPKRKLDPVLRELA
QTRAGWAKASQFVFSQHCKSLRGLKVSEEKIAAIPHWQTAACFDEKERAVLAYADCLVLQAGRTPDGVFGALKGFLSDEE
ILELTYITCLYDMHAVMTKALRLEFDDRDDPIVEVAAPEDFSARDFLDTGRR
>Mature_211_residues
PRLRQVSRKDTDSEVIHRTYDLLFGDRDPVAEPGTATGTSGDWWTVFALVPDCLDHCNRGFAFYRSPKRKLDPVLRELAQ
TRAGWAKASQFVFSQHCKSLRGLKVSEEKIAAIPHWQTAACFDEKERAVLAYADCLVLQAGRTPDGVFGALKGFLSDEEI
LELTYITCLYDMHAVMTKALRLEFDDRDDPIVEVAAPEDFSARDFLDTGRR

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23962; Mature: 23831

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLRQVSRKDTDSEVIHRTYDLLFGDRDPVAEPGTATGTSGDWWTVFALVPDCLDHCNR
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GFAFYRSPKRKLDPVLRELAQTRAGWAKASQFVFSQHCKSLRGLKVSEEKIAAIPHWQTA
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHH
ACFDEKERAVLAYADCLVLQAGRTPDGVFGALKGFLSDEEILELTYITCLYDMHAVMTKA
HHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LRLEFDDRDDPIVEVAAPEDFSARDFLDTGRR
HHCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
>Mature Secondary Structure 
PRLRQVSRKDTDSEVIHRTYDLLFGDRDPVAEPGTATGTSGDWWTVFALVPDCLDHCNR
CCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GFAFYRSPKRKLDPVLRELAQTRAGWAKASQFVFSQHCKSLRGLKVSEEKIAAIPHWQTA
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHH
ACFDEKERAVLAYADCLVLQAGRTPDGVFGALKGFLSDEEILELTYITCLYDMHAVMTKA
HHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LRLEFDDRDDPIVEVAAPEDFSARDFLDTGRR
HHCCCCCCCCCEEEEECCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA