| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105729
Identifier: 197105729
GI number: 197105729
Start: 2569155
End: 2570801
Strand: Direct
Name: 197105729
Synonym: PHZ_c2267
Alternate gene names: NA
Gene position: 2569155-2570801 (Clockwise)
Preceding gene: 197105726
Following gene: 197105735
Centisome position: 64.29
GC content: 69.88
Gene sequence:
>1647_bases ATGAGACTTTTGTCTCACGTCAAGAATATTGTCTCGCGCCGGCGTGAGGGGCGGAACCAGCCTGCCCGCCGCTGGTTCGA GTGGCTCAGCCCCAGGACGATCGACGCGGTGAGCGGTTTCCTCGCGCCCCAGCCCCATGTGGACGAACGCGCCCTCGACC GGGGGCTGCGCGACCTGATGTGGGACGCCACCTTCGCCACGGTCGTGGGGGCCCTGAACTCGGGCGTGGTGCTGGTCGCC TTCGCCCTGTGGCTGGGGGCGCCGAACACGGTGATCGGCCTGCTCGCCGCGATCCCGCTGTGGACCCAGATCCTGCAGGC TCCGGCGGTCAGCCTGGTCGAGCGCCTGCGCGCGCGCCGGCGGATCAGCATCGTGGCCTTGACCATCGCCCGGATCACCC TGCCCCTCTTCGCGATCCTGCCGCTGATCCCCGACCGCCGCCTGGCGCTGATGCTGCTGATCGTGCTGGAGATCGTCCAC ACGGCCTTCAACGCGATCTGCGCCTGCAGCTGGAACTCGTGGATCCGCGACCTCGTGCCCGAGGATCGGCTGGGCCGCTT CTTCGCCCGCCGCACGATCTTCGCGACCGCCGTCGGCATGGCCTGCTCGCTGCTGGCCGGCTTCGCCCTGCAGTCGCAGC AGACGGCCTCCGGCGGCGGGGACGGCGTCGTCTTCACCCTGCTCTATTCCGCCGGCTTCCTGGCGGCCGTGATCAGCACC TGGCGGCTCGCACGCGTGCCCGAGCCGCTGATGCCGCCGCCACAGCCGAAGCAGACCCTCTGGACCCTGCTGAAGGCGCC GCTGAAGGACCCCAATTTCCGCACCCTGATCCGCTTCATGGCGAGCTGGCAGTTCGCCGTGAACTCGGCGACGCCGTTCT TCACCGTCTACTTCGTCCAGCAGCTGGGCCTCGGGATGGGCTGGGTGATGACCTTCTCGGTCGTGAGCCAGGCGGCCAAC CTGCTGGTGCTGCGCACCTGGGGCCAGCTGTCGGACCGCTTCTCGAACAAGTCGGTGCTGAACGTGGCGGCCCCGGCCTT CCTGCTCTGCATCGCGGCCATGGTGTTCGCCTCGGAGATCGACGGCCGGCTGGAGCTGATCGTCTACCTGTCGGTCCTGC ACGCCTTCATGGGCATGGCCTCGGCCGGCGTGAACCTGGCCACCGGCGCCGTGGCCATGAAGCTCGCGCCCCGCAACGGC GCCACGGCCTATATCGCCGCGAACTCACTGATCGCCTCGGCCGCGGCCGGGCTCGCCCCGATCCTGGGCGGCCTGTCGGC CGACTTCTACGCCGCGCGCGAGCTGAGCTTCCAGGTGCTGTGGCGTGATCCGGGCGGGGTGTCCGAGTTCTTCGCCCTGC GGATCACCCACTGGGACTTCTTCTTCCTGATCTCGGCGACCATCGGCCTCTACGCCATGCACCGCCTGTCGTTCCTCGTG GAGGAAGGCACGGTCCGCCGGCGCGTCGTCGTGCGCGAGATAGTCGGCGAGACCCGCCGGGGCATGATCCGCAACCTGTC GCCGGTGAAGGGCCTGCGCCCCGTCTTCCCCGCCGCCGCCCTGATCGACCTGCACGCCCGCTACCGGCAGCAGAAGCGCG CCGCCCGCGCCCGCGACTACCGCGAGGGGCTCAAGGCGGCCGACTAG
Upstream 100 bases:
>100_bases TCGTTCGCCTCGAAGGCGAAGTGCTCGTCGATCTTCCGATCCATCTGCTCGCGGGTGAGCGCCATGCCGCGTCCTCCAAC TCGACCGCGGCCGGGATTTA
Downstream 100 bases:
>100_bases CGCCGTCCCGTGTCCAGGAAGTCTCGGGCGCTGAAGTCCTCGGGCGCGGCCACCTCGACGATGGGGTCGTCGCGGTCGTC GAACTCCAGCCGCAGCGCCT
Product: permease of the major facilitator superfamily
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Family Transporter; Twin-Arginine Translocation Pathway Signal; Transporter Facilitator Family; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MRLLSHVKNIVSRRREGRNQPARRWFEWLSPRTIDAVSGFLAPQPHVDERALDRGLRDLMWDATFATVVGALNSGVVLVA FALWLGAPNTVIGLLAAIPLWTQILQAPAVSLVERLRARRRISIVALTIARITLPLFAILPLIPDRRLALMLLIVLEIVH TAFNAICACSWNSWIRDLVPEDRLGRFFARRTIFATAVGMACSLLAGFALQSQQTASGGGDGVVFTLLYSAGFLAAVIST WRLARVPEPLMPPPQPKQTLWTLLKAPLKDPNFRTLIRFMASWQFAVNSATPFFTVYFVQQLGLGMGWVMTFSVVSQAAN LLVLRTWGQLSDRFSNKSVLNVAAPAFLLCIAAMVFASEIDGRLELIVYLSVLHAFMGMASAGVNLATGAVAMKLAPRNG ATAYIAANSLIASAAAGLAPILGGLSADFYAARELSFQVLWRDPGGVSEFFALRITHWDFFFLISATIGLYAMHRLSFLV EEGTVRRRVVVREIVGETRRGMIRNLSPVKGLRPVFPAAALIDLHARYRQQKRAARARDYREGLKAAD
Sequences:
>Translated_548_residues MRLLSHVKNIVSRRREGRNQPARRWFEWLSPRTIDAVSGFLAPQPHVDERALDRGLRDLMWDATFATVVGALNSGVVLVA FALWLGAPNTVIGLLAAIPLWTQILQAPAVSLVERLRARRRISIVALTIARITLPLFAILPLIPDRRLALMLLIVLEIVH TAFNAICACSWNSWIRDLVPEDRLGRFFARRTIFATAVGMACSLLAGFALQSQQTASGGGDGVVFTLLYSAGFLAAVIST WRLARVPEPLMPPPQPKQTLWTLLKAPLKDPNFRTLIRFMASWQFAVNSATPFFTVYFVQQLGLGMGWVMTFSVVSQAAN LLVLRTWGQLSDRFSNKSVLNVAAPAFLLCIAAMVFASEIDGRLELIVYLSVLHAFMGMASAGVNLATGAVAMKLAPRNG ATAYIAANSLIASAAAGLAPILGGLSADFYAARELSFQVLWRDPGGVSEFFALRITHWDFFFLISATIGLYAMHRLSFLV EEGTVRRRVVVREIVGETRRGMIRNLSPVKGLRPVFPAAALIDLHARYRQQKRAARARDYREGLKAAD >Mature_548_residues MRLLSHVKNIVSRRREGRNQPARRWFEWLSPRTIDAVSGFLAPQPHVDERALDRGLRDLMWDATFATVVGALNSGVVLVA FALWLGAPNTVIGLLAAIPLWTQILQAPAVSLVERLRARRRISIVALTIARITLPLFAILPLIPDRRLALMLLIVLEIVH TAFNAICACSWNSWIRDLVPEDRLGRFFARRTIFATAVGMACSLLAGFALQSQQTASGGGDGVVFTLLYSAGFLAAVIST WRLARVPEPLMPPPQPKQTLWTLLKAPLKDPNFRTLIRFMASWQFAVNSATPFFTVYFVQQLGLGMGWVMTFSVVSQAAN LLVLRTWGQLSDRFSNKSVLNVAAPAFLLCIAAMVFASEIDGRLELIVYLSVLHAFMGMASAGVNLATGAVAMKLAPRNG ATAYIAANSLIASAAAGLAPILGGLSADFYAARELSFQVLWRDPGGVSEFFALRITHWDFFFLISATIGLYAMHRLSFLV EEGTVRRRVVVREIVGETRRGMIRNLSPVKGLRPVFPAAALIDLHARYRQQKRAARARDYREGLKAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60393; Mature: 60393
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLSHVKNIVSRRREGRNQPARRWFEWLSPRTIDAVSGFLAPQPHVDERALDRGLRDLM CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH WDATFATVVGALNSGVVLVAFALWLGAPNTVIGLLAAIPLWTQILQAPAVSLVERLRARR HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISIVALTIARITLPLFAILPLIPDRRLALMLLIVLEIVHTAFNAICACSWNSWIRDLVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC EDRLGRFFARRTIFATAVGMACSLLAGFALQSQQTASGGGDGVVFTLLYSAGFLAAVIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WRLARVPEPLMPPPQPKQTLWTLLKAPLKDPNFRTLIRFMASWQFAVNSATPFFTVYFVQ HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLGLGMGWVMTFSVVSQAANLLVLRTWGQLSDRFSNKSVLNVAAPAFLLCIAAMVFASEI HHCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC DGRLELIVYLSVLHAFMGMASAGVNLATGAVAMKLAPRNGATAYIAANSLIASAAAGLAP CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHH ILGGLSADFYAARELSFQVLWRDPGGVSEFFALRITHWDFFFLISATIGLYAMHRLSFLV HHHCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGTVRRRVVVREIVGETRRGMIRNLSPVKGLRPVFPAAALIDLHARYRQQKRAARARDY HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REGLKAAD HHHCCCCC >Mature Secondary Structure MRLLSHVKNIVSRRREGRNQPARRWFEWLSPRTIDAVSGFLAPQPHVDERALDRGLRDLM CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH WDATFATVVGALNSGVVLVAFALWLGAPNTVIGLLAAIPLWTQILQAPAVSLVERLRARR HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISIVALTIARITLPLFAILPLIPDRRLALMLLIVLEIVHTAFNAICACSWNSWIRDLVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC EDRLGRFFARRTIFATAVGMACSLLAGFALQSQQTASGGGDGVVFTLLYSAGFLAAVIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WRLARVPEPLMPPPQPKQTLWTLLKAPLKDPNFRTLIRFMASWQFAVNSATPFFTVYFVQ HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLGLGMGWVMTFSVVSQAANLLVLRTWGQLSDRFSNKSVLNVAAPAFLLCIAAMVFASEI HHCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC DGRLELIVYLSVLHAFMGMASAGVNLATGAVAMKLAPRNGATAYIAANSLIASAAAGLAP CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHH ILGGLSADFYAARELSFQVLWRDPGGVSEFFALRITHWDFFFLISATIGLYAMHRLSFLV HHHCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGTVRRRVVVREIVGETRRGMIRNLSPVKGLRPVFPAAALIDLHARYRQQKRAARARDY HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REGLKAAD HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA