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The map label for this gene is 197105727

Identifier: 197105727

GI number: 197105727

Start: 2568104

End: 2568694

Strand: Reverse

Name: 197105727

Synonym: PHZ_c2265

Alternate gene names: NA

Gene position: 2568694-2568104 (Counterclockwise)

Preceding gene: 197105728

Following gene: 197105724

Centisome position: 64.28

GC content: 75.13

Gene sequence:

>591_bases
ATGGACGGCACCGCCGGCCGTTCGAACCAGAGACGCCGCACCCGCAAGGCGCTGCTCGAGGCCGCCGCCCGGCTGGCGCG
GGACGGCCGCAAGCCGTCGCTGGACGAGGTCGCCGCCGAGGCGCTTGTCTCGCGGGCGACGGCCTACCGCTACTTCCCCA
ACGTCGAGCAGCTGCTGGTGGAAGCGGCCCTCGACGTGGCGATGCCGGATCCCGCCGCGCTGTTCGGTCCCGGCGCGCCG
CGCGATCCCGTGGCGCGGCTGGAGCGGCTGGACGAGACCCTCGACTCCCTGCTCGCCGGGCACGAGCCGCAGTTCCGGAT
GATGCTCGCCCATTCCATGGAGGGGGCGCTGGGGGGCGAGGGGCTGCCCGCGCGGCAGAACCGGCGCACGCCCCTGATCG
AGGCGGCGCTGGACGGCGTGGACCTGACGCCCGTCGCCCGCGACCGGCTGAGCAAGGCGCTGGCGATCCTCATCGGGACC
GAGGCCATGGTGGTGTGCAAGGACGTGCTGCAGCTGCCCCCCGACGAGGCGCGCCGGGTGAAGCGCTGGGCCATCCGCGC
CCTGGTGGACGCCGCCCGCGCGAAGGCGTGA

Upstream 100 bases:

>100_bases
TGCTGCACGTGATCGAGTTCGCCGATACGGGCGATATCCGGCGCGAGAACGTGTGGATCGACATGGCCGCGATCCTGCAG
CAGCTGCCGCAGGCCTGAGG

Downstream 100 bases:

>100_bases
GCGGCGAGGGGCGCCCGATCAGATCCCGGGGTCGAAGGCGCCTTCCAGCCAGGCGAAGATCTGCTCGGCCGCCTCGTCGG
GCGACATCCGGGTCGTGTCG

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDGTAGRSNQRRRTRKALLEAAARLARDGRKPSLDEVAAEALVSRATAYRYFPNVEQLLVEAALDVAMPDPAALFGPGAP
RDPVARLERLDETLDSLLAGHEPQFRMMLAHSMEGALGGEGLPARQNRRTPLIEAALDGVDLTPVARDRLSKALAILIGT
EAMVVCKDVLQLPPDEARRVKRWAIRALVDAARAKA

Sequences:

>Translated_196_residues
MDGTAGRSNQRRRTRKALLEAAARLARDGRKPSLDEVAAEALVSRATAYRYFPNVEQLLVEAALDVAMPDPAALFGPGAP
RDPVARLERLDETLDSLLAGHEPQFRMMLAHSMEGALGGEGLPARQNRRTPLIEAALDGVDLTPVARDRLSKALAILIGT
EAMVVCKDVLQLPPDEARRVKRWAIRALVDAARAKA
>Mature_196_residues
MDGTAGRSNQRRRTRKALLEAAARLARDGRKPSLDEVAAEALVSRATAYRYFPNVEQLLVEAALDVAMPDPAALFGPGAP
RDPVARLERLDETLDSLLAGHEPQFRMMLAHSMEGALGGEGLPARQNRRTPLIEAALDGVDLTPVARDRLSKALAILIGT
EAMVVCKDVLQLPPDEARRVKRWAIRALVDAARAKA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21276; Mature: 21276

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTAGRSNQRRRTRKALLEAAARLARDGRKPSLDEVAAEALVSRATAYRYFPNVEQLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAALDVAMPDPAALFGPGAPRDPVARLERLDETLDSLLAGHEPQFRMMLAHSMEGALGGE
HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GLPARQNRRTPLIEAALDGVDLTPVARDRLSKALAILIGTEAMVVCKDVLQLPPDEARRV
CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH
KRWAIRALVDAARAKA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDGTAGRSNQRRRTRKALLEAAARLARDGRKPSLDEVAAEALVSRATAYRYFPNVEQLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAALDVAMPDPAALFGPGAPRDPVARLERLDETLDSLLAGHEPQFRMMLAHSMEGALGGE
HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GLPARQNRRTPLIEAALDGVDLTPVARDRLSKALAILIGTEAMVVCKDVLQLPPDEARRV
CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH
KRWAIRALVDAARAKA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA