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The map label for this gene is ykcC [H]

Identifier: 197105708

GI number: 197105708

Start: 2542899

End: 2543912

Strand: Reverse

Name: ykcC [H]

Synonym: PHZ_c2246

Alternate gene names: 197105708

Gene position: 2543912-2542899 (Counterclockwise)

Preceding gene: 197105709

Following gene: 197105707

Centisome position: 63.66

GC content: 70.32

Gene sequence:

>1014_bases
GTGCCGGAGCGCTATCCGATCCTTCTGTCCGTGGTCGTGCCGCTGCGCAACGTGGCGGGGCGCGCCCGCGCGCTCGTCGA
GCCGCTGGTGGCCGAGCTGGCGGCCCAGGTCGAGGACTTCGAGGTGGTCATCGTCGACAACGGTTCGACCGACGGCTCGG
TGCGCGACTATGCGGACCTCGTGCAGGAGGGCGGGCTGCCCAACCTGCAGATCTACCGGCTGATCCGCGCCGTCGACCTC
GAGATCGCCGTCTGGGCCGGCGTCGAGAACGCGCTGGGCGACTACGTGCTGGTGCTGGACCCGCTGAACGAGGACCTCTC
GTTCCTGCCCCGCGCCCTGGAGAAGATCGCCGAGGGGGCGGACCTCGTCACCGTCCGCAACACCACGCCCAAGCCGATGT
CCGGGACCGAGCGAATGCTGGACCGGCTGTTCCACGGGGTCTTCCGCCGGCTGGTGGGCGTGGACCTGGAGGTCGAGGGG
GCGAGCTGCCGGCTGATCAGCAAGCGCGTGGTGAGCTTCCTGCTGGAGCAGCCGAAGCCCGGCCTGCGCTACCGGGCGCT
GCCGGCGCTGGCGGGCTTTCCGAAGGCGGCGATCGACTACGAAGGACCCCGGCGGCCTCAGCCGCGCACCAGCCTGCGCA
GCAAGGCCCGGCGGGGTCTCAACCTGCTGTTCTCCCAGACCACCCTGCCGCTGCGGATCGCCTCGGCCCTGGCGATCACG
GGCGCGACGCTGAACCTGATCTATTCCGGCTACGTGATCCTGATCCGGCTGTTCAAGTCGGACGTCATGCCCGGCTGGAC
GACGCTGTCGCTGCAGCAGTCGGGCATGTTCTTCCTGCTGTCGCTGGTGGTGTTCATCCTCGTCGAATACGTCGCCCAGG
TGCTGTCCTGGACGCTGGAAGGGCCCTCCTACTACCTGGCCGGGGAGCACACGAGCGCGGTGCTGACGCGGCGCACGCGG
CTGAACGTCGAGGCCGGGCCGCGCCGGCCCGCGGTCCGGCAGGGGGCGGGATGA

Upstream 100 bases:

>100_bases
GTACGCGCCTATCCCTGACGTCCGCCTCGGCCTTCGGCCTTACGATCCTTGCGGAACGCGCCGCGACCCGGCAAGCGTGG
GCCCCCTGGGGAGTCGAGCC

Downstream 100 bases:

>100_bases
CCACCGCCATCGTGGCGGGCGGCGGCTTCTACGGGGCGATGATCGCCGCCTACCTGAAGACCCGGCGCGGGGTCGGGACG
GTCAGGCTCTTCGAGGCGGC

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MPERYPILLSVVVPLRNVAGRARALVEPLVAELAAQVEDFEVVIVDNGSTDGSVRDYADLVQEGGLPNLQIYRLIRAVDL
EIAVWAGVENALGDYVLVLDPLNEDLSFLPRALEKIAEGADLVTVRNTTPKPMSGTERMLDRLFHGVFRRLVGVDLEVEG
ASCRLISKRVVSFLLEQPKPGLRYRALPALAGFPKAAIDYEGPRRPQPRTSLRSKARRGLNLLFSQTTLPLRIASALAIT
GATLNLIYSGYVILIRLFKSDVMPGWTTLSLQQSGMFFLLSLVVFILVEYVAQVLSWTLEGPSYYLAGEHTSAVLTRRTR
LNVEAGPRRPAVRQGAG

Sequences:

>Translated_337_residues
MPERYPILLSVVVPLRNVAGRARALVEPLVAELAAQVEDFEVVIVDNGSTDGSVRDYADLVQEGGLPNLQIYRLIRAVDL
EIAVWAGVENALGDYVLVLDPLNEDLSFLPRALEKIAEGADLVTVRNTTPKPMSGTERMLDRLFHGVFRRLVGVDLEVEG
ASCRLISKRVVSFLLEQPKPGLRYRALPALAGFPKAAIDYEGPRRPQPRTSLRSKARRGLNLLFSQTTLPLRIASALAIT
GATLNLIYSGYVILIRLFKSDVMPGWTTLSLQQSGMFFLLSLVVFILVEYVAQVLSWTLEGPSYYLAGEHTSAVLTRRTR
LNVEAGPRRPAVRQGAG
>Mature_336_residues
PERYPILLSVVVPLRNVAGRARALVEPLVAELAAQVEDFEVVIVDNGSTDGSVRDYADLVQEGGLPNLQIYRLIRAVDLE
IAVWAGVENALGDYVLVLDPLNEDLSFLPRALEKIAEGADLVTVRNTTPKPMSGTERMLDRLFHGVFRRLVGVDLEVEGA
SCRLISKRVVSFLLEQPKPGLRYRALPALAGFPKAAIDYEGPRRPQPRTSLRSKARRGLNLLFSQTTLPLRIASALAITG
ATLNLIYSGYVILIRLFKSDVMPGWTTLSLQQSGMFFLLSLVVFILVEYVAQVLSWTLEGPSYYLAGEHTSAVLTRRTRL
NVEAGPRRPAVRQGAG

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=306, Percent_Identity=21.8954248366013, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37119; Mature: 36988

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERYPILLSVVVPLRNVAGRARALVEPLVAELAAQVEDFEVVIVDNGSTDGSVRDYADL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHH
VQEGGLPNLQIYRLIRAVDLEIAVWAGVENALGDYVLVLDPLNEDLSFLPRALEKIAEGA
HHHCCCCCHHHHHHHHHHHHHEEEECCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCC
DLVTVRNTTPKPMSGTERMLDRLFHGVFRRLVGVDLEVEGASCRLISKRVVSFLLEQPKP
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC
GLRYRALPALAGFPKAAIDYEGPRRPQPRTSLRSKARRGLNLLFSQTTLPLRIASALAIT
CCCEEHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHH
GATLNLIYSGYVILIRLFKSDVMPGWTTLSLQQSGMFFLLSLVVFILVEYVAQVLSWTLE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GPSYYLAGEHTSAVLTRRTRLNVEAGPRRPAVRQGAG
CCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PERYPILLSVVVPLRNVAGRARALVEPLVAELAAQVEDFEVVIVDNGSTDGSVRDYADL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHH
VQEGGLPNLQIYRLIRAVDLEIAVWAGVENALGDYVLVLDPLNEDLSFLPRALEKIAEGA
HHHCCCCCHHHHHHHHHHHHHEEEECCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCC
DLVTVRNTTPKPMSGTERMLDRLFHGVFRRLVGVDLEVEGASCRLISKRVVSFLLEQPKP
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC
GLRYRALPALAGFPKAAIDYEGPRRPQPRTSLRSKARRGLNLLFSQTTLPLRIASALAIT
CCCEEHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHH
GATLNLIYSGYVILIRLFKSDVMPGWTTLSLQQSGMFFLLSLVVFILVEYVAQVLSWTLE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GPSYYLAGEHTSAVLTRRTRLNVEAGPRRPAVRQGAG
CCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]