| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is manC [H]
Identifier: 197105703
GI number: 197105703
Start: 2536878
End: 2539034
Strand: Reverse
Name: manC [H]
Synonym: PHZ_c2241
Alternate gene names: 197105703
Gene position: 2539034-2536878 (Counterclockwise)
Preceding gene: 197105704
Following gene: 197105702
Centisome position: 63.54
GC content: 76.03
Gene sequence:
>2157_bases GTGGCCGTCTATCCGGTGATCATGTGCGGCGGGTCGGGGACGCGGCTGTGGCCGGCCTCGCGCCCCTGGCGGCCCAAGCA GTTCATTCCGCTGACCGGGGCCCGCTCCAGCTTCCAGGAGACGCTGGTCCGGGTGGCGCCGCTGGCCGAGGCCGGCCCCG TGCTGGTCGTCGCGGGGATCGCCCACCAGGCCCTCATCGAGGCCCAGCTTGCCGAGATCGGCGGACAGGCGGTGGTGCTG CTGGAGCCTGAGCCGCGGGACTCGGCCGCCGCCATCGCCGCGGCCTGCGCCTGGATCGAAGCGCGCGATCCGGACGCCGT GGCGGTCATCGTCTCGGCCGACCACCACATCCCCGACGCCGACGCCTTCCGTGCGGCCGTGGCGCAGACCCTGCCGGCGG CCTGCGAGGGCGCGGTCGTGACGCTGGGCGTAGAGCCGACCGAGCCCGCCACGGCCTACGGCTACATCCGGCCGGGCGCA GGGGCCGAGGCCGTGAAGCCGGTCGCGGCCTTCGTCGAGAAGCCCGACGCCGAACGGGCCCGGGCCTATGTGGCGGACGG CTACCTGTGGAACAGCGGCAATTTCGTCGCCACGGCGCGGACGCTGATGGACGAGCTCGGCGCCCATGCGCCCGGCGTGG CGAAGGCCGCGCGGGCCGGGGTCGCCGACCTGGAAGCGAACGGCGCGGCCTGGATCCTCGGCCGGCCGTTCCGCCAGGCG CCGAAGATATCCATCGACTACGCGGTGATGGAGAAGACCGCCCGGGCCGCCGTGCTGCCGGTCGCCTTCGAATGGTCGGA CGTCGGCGCGTGGGACGCGGTCCTGGCGGGCTCGGACCGCGACGCCGACGGCAACAGCCTGAGCGGCAACGTGCAGGCGG TGGGCGCGCGCGACCTGCTGGTCCGGGCCTCGGACGACCTGCACGTGGCGGTGGTCGGCGCCTCCAACCTGGCGGTGATC GTCGAGCCGGACGTGGTGCTGGTCTGCGACCTCGCCGCCAGCCAGGACGTCAAGGCCGCGGCGGCCGCGGCCCCGCCCGG CGGCCGGGGCCGGCGCTTCACCACCCTGGAGGCCGCCGCCGACTGGTACGACCTGTGGTTCCGCACCGCCGCCCTGCCGC TGTGGAGCACCCTGGGGGCCGATCCCGTCAACGGCGGTTTCCGCGAGGCGCTGACCGCCGAGGGCGAGGCGGTCGACCCG CGGCGGCGCGCCCGCACCCAGGCCCGGCAGGTCTTCGTCTTCGCCACGGCGGCGGCGATCGGCGCCCCCGGCCCCTGGCT GGAGGTCGCCAAGCGCGGCTGGGAGTTCTACGCCGCCCGGGGACTGCGCAAGGACGGGCGGACGGTGTCGGTGCTGACCG TGGACGGCGCGCCGCTGGACGAGACCGCCTGCCTGTACGAGCACGCCTTCCTGCTGCTGGCCCTGAGCGCGCTCGCCCGT GCCGAGCCCGGGGACGCCCGCTGGCGGACCGAGGGCGCCCGCGCCCGCGCGGCCCTGGAGATCTTCCGCCATCCGGCCGG CGGCTTCCGCGAGGCGGGGCCCCAGCCCTACCAGGCCAACGCCCACATGCACCTCTTCGAGGCGGCCCTCGCCTGGGAGG CGGTGGAGCCCGACGGCGGCTGGGGGCGGCTGGCGGACGAGGTGGCCGATCTCGCCCTCGAGCGGTTCATCGATCCCGAC AGCGGCGTGCTGCGCGAGTTCTTCGACGCGGGCTGGGCCCCTCTGACGGGCGAGGCGGGCCTGGTGGAGCCGGGGCACCA GTTCGAATGGGCCTGGTTGCTGGAGCGCTGGGGCCGGGCCCGCGGCGCCGAGCGCGGGCTGCACACGGCGCGCCGCCTCT ACGAGGTCGGCCGGGCGGGCGTCGACGCCTCGCGCGAGGTGGCGGTCAACGCCCTGTGGGACGACCTGGCGGTGCGCGAC GGCTATGCACGCCTGTGGCCTCAGACCGAGCGCCTGAAGGCCGCCGTCCTGCTGGGCGAGGAGGCCGACGCCATCTCGGC CGCGCGGGGGCTGGCGCGCTATCTGGAGACCCCCGCCCGGGGCGCCTGGCGCGACAAGCTGCGGCCCGACGGCGGCTTCG TGGACGAGCCGGCGCCGGCGACCTCGCTGTACCACCTGACCATGGCGGTGCTGGAGCTGACCGGCCGCGCCGGATGA
Upstream 100 bases:
>100_bases GGGCGAGATCGCGCTTCTGCGCACGCTGGCCCTAGTCTGCCTTGGCCGATTCAACCCGCCTCGGGTTAGTTAGCGGTTCG GCGAGGGGGAGGGGCGCGGC
Downstream 100 bases:
>100_bases CACCCGGCGCCCGGATTCCGGGCAGGCTGCCCAGGCTGCGGGCGCCTGTCGAACCGGGTTTCGCAATTGAAGCGATGACG TCTTCGCGCTGACACAAATC
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 718; Mature: 717
Protein sequence:
>718_residues MAVYPVIMCGGSGTRLWPASRPWRPKQFIPLTGARSSFQETLVRVAPLAEAGPVLVVAGIAHQALIEAQLAEIGGQAVVL LEPEPRDSAAAIAAACAWIEARDPDAVAVIVSADHHIPDADAFRAAVAQTLPAACEGAVVTLGVEPTEPATAYGYIRPGA GAEAVKPVAAFVEKPDAERARAYVADGYLWNSGNFVATARTLMDELGAHAPGVAKAARAGVADLEANGAAWILGRPFRQA PKISIDYAVMEKTARAAVLPVAFEWSDVGAWDAVLAGSDRDADGNSLSGNVQAVGARDLLVRASDDLHVAVVGASNLAVI VEPDVVLVCDLAASQDVKAAAAAAPPGGRGRRFTTLEAAADWYDLWFRTAALPLWSTLGADPVNGGFREALTAEGEAVDP RRRARTQARQVFVFATAAAIGAPGPWLEVAKRGWEFYAARGLRKDGRTVSVLTVDGAPLDETACLYEHAFLLLALSALAR AEPGDARWRTEGARARAALEIFRHPAGGFREAGPQPYQANAHMHLFEAALAWEAVEPDGGWGRLADEVADLALERFIDPD SGVLREFFDAGWAPLTGEAGLVEPGHQFEWAWLLERWGRARGAERGLHTARRLYEVGRAGVDASREVAVNALWDDLAVRD GYARLWPQTERLKAAVLLGEEADAISAARGLARYLETPARGAWRDKLRPDGGFVDEPAPATSLYHLTMAVLELTGRAG
Sequences:
>Translated_718_residues MAVYPVIMCGGSGTRLWPASRPWRPKQFIPLTGARSSFQETLVRVAPLAEAGPVLVVAGIAHQALIEAQLAEIGGQAVVL LEPEPRDSAAAIAAACAWIEARDPDAVAVIVSADHHIPDADAFRAAVAQTLPAACEGAVVTLGVEPTEPATAYGYIRPGA GAEAVKPVAAFVEKPDAERARAYVADGYLWNSGNFVATARTLMDELGAHAPGVAKAARAGVADLEANGAAWILGRPFRQA PKISIDYAVMEKTARAAVLPVAFEWSDVGAWDAVLAGSDRDADGNSLSGNVQAVGARDLLVRASDDLHVAVVGASNLAVI VEPDVVLVCDLAASQDVKAAAAAAPPGGRGRRFTTLEAAADWYDLWFRTAALPLWSTLGADPVNGGFREALTAEGEAVDP RRRARTQARQVFVFATAAAIGAPGPWLEVAKRGWEFYAARGLRKDGRTVSVLTVDGAPLDETACLYEHAFLLLALSALAR AEPGDARWRTEGARARAALEIFRHPAGGFREAGPQPYQANAHMHLFEAALAWEAVEPDGGWGRLADEVADLALERFIDPD SGVLREFFDAGWAPLTGEAGLVEPGHQFEWAWLLERWGRARGAERGLHTARRLYEVGRAGVDASREVAVNALWDDLAVRD GYARLWPQTERLKAAVLLGEEADAISAARGLARYLETPARGAWRDKLRPDGGFVDEPAPATSLYHLTMAVLELTGRAG >Mature_717_residues AVYPVIMCGGSGTRLWPASRPWRPKQFIPLTGARSSFQETLVRVAPLAEAGPVLVVAGIAHQALIEAQLAEIGGQAVVLL EPEPRDSAAAIAAACAWIEARDPDAVAVIVSADHHIPDADAFRAAVAQTLPAACEGAVVTLGVEPTEPATAYGYIRPGAG AEAVKPVAAFVEKPDAERARAYVADGYLWNSGNFVATARTLMDELGAHAPGVAKAARAGVADLEANGAAWILGRPFRQAP KISIDYAVMEKTARAAVLPVAFEWSDVGAWDAVLAGSDRDADGNSLSGNVQAVGARDLLVRASDDLHVAVVGASNLAVIV EPDVVLVCDLAASQDVKAAAAAAPPGGRGRRFTTLEAAADWYDLWFRTAALPLWSTLGADPVNGGFREALTAEGEAVDPR RRARTQARQVFVFATAAAIGAPGPWLEVAKRGWEFYAARGLRKDGRTVSVLTVDGAPLDETACLYEHAFLLLALSALARA EPGDARWRTEGARARAALEIFRHPAGGFREAGPQPYQANAHMHLFEAALAWEAVEPDGGWGRLADEVADLALERFIDPDS GVLREFFDAGWAPLTGEAGLVEPGHQFEWAWLLERWGRARGAERGLHTARRLYEVGRAGVDASREVAVNALWDDLAVRDG YARLWPQTERLKAAVLLGEEADAISAARGLARYLETPARGAWRDKLRPDGGFVDEPAPATSLYHLTMAVLELTGRAG
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=374, Percent_Identity=38.2352941176471, Blast_Score=211, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 76282; Mature: 76150
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYPVIMCGGSGTRLWPASRPWRPKQFIPLTGARSSFQETLVRVAPLAEAGPVLVVAGI CCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECH AHQALIEAQLAEIGGQAVVLLEPEPRDSAAAIAAACAWIEARDPDAVAVIVSADHHIPDA HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH DAFRAAVAQTLPAACEGAVVTLGVEPTEPATAYGYIRPGAGAEAVKPVAAFVEKPDAERA HHHHHHHHHHCCHHCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHH RAYVADGYLWNSGNFVATARTLMDELGAHAPGVAKAARAGVADLEANGAAWILGRPFRQA HEEEECCEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCEEEECCCCCCC PKISIDYAVMEKTARAAVLPVAFEWSDVGAWDAVLAGSDRDADGNSLSGNVQAVGARDLL CCCEEEHHHHHHHHHHEEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCCEEEECCEEEE VRASDDLHVAVVGASNLAVIVEPDVVLVCDLAASQDVKAAAAAAPPGGRGRRFTTLEAAA EECCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEHHHHH DWYDLWFRTAALPLWSTLGADPVNGGFREALTAEGEAVDPRRRARTQARQVFVFATAAAI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEEEHHHH GAPGPWLEVAKRGWEFYAARGLRKDGRTVSVLTVDGAPLDETACLYEHAFLLLALSALAR CCCCHHHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC AEPGDARWRTEGARARAALEIFRHPAGGFREAGPQPYQANAHMHLFEAALAWEAVEPDGG CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC WGRLADEVADLALERFIDPDSGVLREFFDAGWAPLTGEAGLVEPGHQFEWAWLLERWGRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RGAERGLHTARRLYEVGRAGVDASREVAVNALWDDLAVRDGYARLWPQTERLKAAVLLGE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEEEEECC EADAISAARGLARYLETPARGAWRDKLRPDGGFVDEPAPATSLYHLTMAVLELTGRAG CHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AVYPVIMCGGSGTRLWPASRPWRPKQFIPLTGARSSFQETLVRVAPLAEAGPVLVVAGI CEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECH AHQALIEAQLAEIGGQAVVLLEPEPRDSAAAIAAACAWIEARDPDAVAVIVSADHHIPDA HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH DAFRAAVAQTLPAACEGAVVTLGVEPTEPATAYGYIRPGAGAEAVKPVAAFVEKPDAERA HHHHHHHHHHCCHHCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHH RAYVADGYLWNSGNFVATARTLMDELGAHAPGVAKAARAGVADLEANGAAWILGRPFRQA HEEEECCEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCEEEECCCCCCC PKISIDYAVMEKTARAAVLPVAFEWSDVGAWDAVLAGSDRDADGNSLSGNVQAVGARDLL CCCEEEHHHHHHHHHHEEEEEEEECCCCCCCHHEEECCCCCCCCCCCCCCEEEECCEEEE VRASDDLHVAVVGASNLAVIVEPDVVLVCDLAASQDVKAAAAAAPPGGRGRRFTTLEAAA EECCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEHHHHH DWYDLWFRTAALPLWSTLGADPVNGGFREALTAEGEAVDPRRRARTQARQVFVFATAAAI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEEEHHHH GAPGPWLEVAKRGWEFYAARGLRKDGRTVSVLTVDGAPLDETACLYEHAFLLLALSALAR CCCCHHHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC AEPGDARWRTEGARARAALEIFRHPAGGFREAGPQPYQANAHMHLFEAALAWEAVEPDGG CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC WGRLADEVADLALERFIDPDSGVLREFFDAGWAPLTGEAGLVEPGHQFEWAWLLERWGRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RGAERGLHTARRLYEVGRAGVDASREVAVNALWDDLAVRDGYARLWPQTERLKAAVLLGE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEEEEECC EADAISAARGLARYLETPARGAWRDKLRPDGGFVDEPAPATSLYHLTMAVLELTGRAG CHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]