| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105683
Identifier: 197105683
GI number: 197105683
Start: 2509640
End: 2510458
Strand: Reverse
Name: 197105683
Synonym: PHZ_c2220
Alternate gene names: NA
Gene position: 2510458-2509640 (Counterclockwise)
Preceding gene: 197105686
Following gene: 197105682
Centisome position: 62.82
GC content: 68.86
Gene sequence:
>819_bases ATGGGCGCGCTGAAAGTTCGTGCCGATGACATCCTCGACTCCTTGCGGGTGACGCCGTCGGCGGCAGAATCTGTGGACGA GGTCGCGCGGCGGGTGCGCGCTCACGTGGAGGCGAACTGGACCGTCGTCGGGGTGGCCGATACGAGCCGGCGGCTAGGGT TCAGCGGAACATTCGCGCCGCATGACCGGCAGCAGCTCCCGGCCAAGTGCGAGACGGGCCCGGCTGGCGTCGTGACCTTC ACCACGTCCGACAGCGGCGTCGTGTGCGCCGCGTACCCCTATCGCGACGCTGAGGGGACCTTCCGGGCGCGCCTCGCCTT CGCGGCACCCGGCGCGCCGATCCTGGAGCACGACCTCGAACGCTGGGGCGGCGGGACGGGGGGCGGTCTACGTGGGAACT GGATGTTCCTCCAGCCGACCCCGGACACCGAGGAGCCCGGGGATCGTGAGCGGGCGGCGAAAAACAAGGCGATGGCGGAC TGCGCGCCGAAGGACCTTGATAGCGCGATGGCGTGCCTGGACGCGCACTGGTCCGACGAGACGAAGCAAACCTTCCGCGC CCTGCCGGCGAAGGATGTGATCGGCAGCCACTTCGGCGTGGGCATGTGGATCCGCAACAACTGGGGGCTCTGGAAGGGCG GGCCGCTGAAGGACTTCTTCGTCGCCCGGGGCGTGAGCCATCCCGACAACATGTCTGGGGTGATGATGAACGCCTATTGG CTGAAGCTGCAGGGCTGCCGGCTGGCGTCGAACGATACGGCGGCCGTCGAGGCCGCATTCCAAGAGGCGCGGCACGGCCG GGAGTGCGTAAACCGCTGA
Upstream 100 bases:
>100_bases GTTCCAGGCGTTCGTCATTGCGGCGTTCGAAGAAGGCAAGGCCTCCAGCGCTGGAAAGGCGATCACGCGGGAGACCTGTC TTGTCCAGCTGAAGACGCGG
Downstream 100 bases:
>100_bases GGCGCACCCGGCCTGAAAACCATGGCTTCCGACCCATAGCTGAGGTTAGGAAGGTCCGCGTAGGGAGTTCGAGCCAAGGT CCCCTCCGACCCATTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGALKVRADDILDSLRVTPSAAESVDEVARRVRAHVEANWTVVGVADTSRRLGFSGTFAPHDRQQLPAKCETGPAGVVTF TTSDSGVVCAAYPYRDAEGTFRARLAFAAPGAPILEHDLERWGGGTGGGLRGNWMFLQPTPDTEEPGDRERAAKNKAMAD CAPKDLDSAMACLDAHWSDETKQTFRALPAKDVIGSHFGVGMWIRNNWGLWKGGPLKDFFVARGVSHPDNMSGVMMNAYW LKLQGCRLASNDTAAVEAAFQEARHGRECVNR
Sequences:
>Translated_272_residues MGALKVRADDILDSLRVTPSAAESVDEVARRVRAHVEANWTVVGVADTSRRLGFSGTFAPHDRQQLPAKCETGPAGVVTF TTSDSGVVCAAYPYRDAEGTFRARLAFAAPGAPILEHDLERWGGGTGGGLRGNWMFLQPTPDTEEPGDRERAAKNKAMAD CAPKDLDSAMACLDAHWSDETKQTFRALPAKDVIGSHFGVGMWIRNNWGLWKGGPLKDFFVARGVSHPDNMSGVMMNAYW LKLQGCRLASNDTAAVEAAFQEARHGRECVNR >Mature_271_residues GALKVRADDILDSLRVTPSAAESVDEVARRVRAHVEANWTVVGVADTSRRLGFSGTFAPHDRQQLPAKCETGPAGVVTFT TSDSGVVCAAYPYRDAEGTFRARLAFAAPGAPILEHDLERWGGGTGGGLRGNWMFLQPTPDTEEPGDRERAAKNKAMADC APKDLDSAMACLDAHWSDETKQTFRALPAKDVIGSHFGVGMWIRNNWGLWKGGPLKDFFVARGVSHPDNMSGVMMNAYWL KLQGCRLASNDTAAVEAAFQEARHGRECVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29518; Mature: 29387
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALKVRADDILDSLRVTPSAAESVDEVARRVRAHVEANWTVVGVADTSRRLGFSGTFAP CCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC HDRQQLPAKCETGPAGVVTFTTSDSGVVCAAYPYRDAEGTFRARLAFAAPGAPILEHDLE CCHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHH RWGGGTGGGLRGNWMFLQPTPDTEEPGDRERAAKNKAMADCAPKDLDSAMACLDAHWSDE HHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH TKQTFRALPAKDVIGSHFGVGMWIRNNWGLWKGGPLKDFFVARGVSHPDNMSGVMMNAYW HHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEE LKLQGCRLASNDTAAVEAAFQEARHGRECVNR EEEECCEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GALKVRADDILDSLRVTPSAAESVDEVARRVRAHVEANWTVVGVADTSRRLGFSGTFAP CCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC HDRQQLPAKCETGPAGVVTFTTSDSGVVCAAYPYRDAEGTFRARLAFAAPGAPILEHDLE CCHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHH RWGGGTGGGLRGNWMFLQPTPDTEEPGDRERAAKNKAMADCAPKDLDSAMACLDAHWSDE HHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH TKQTFRALPAKDVIGSHFGVGMWIRNNWGLWKGGPLKDFFVARGVSHPDNMSGVMMNAYW HHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEE LKLQGCRLASNDTAAVEAAFQEARHGRECVNR EEEECCEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA