| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105675
Identifier: 197105675
GI number: 197105675
Start: 2500195
End: 2501535
Strand: Reverse
Name: 197105675
Synonym: PHZ_c2212
Alternate gene names: NA
Gene position: 2501535-2500195 (Counterclockwise)
Preceding gene: 197105676
Following gene: 197105674
Centisome position: 62.6
GC content: 72.41
Gene sequence:
>1341_bases GTGAGCCGTCGGCGGACGCGGGAGAAGGGGCTGCCGCTGACCTGGGAGCCGCGGCCGCACCAGGTGGAGCTGTGGGAGAC CCTGGTGGACGGCTGCCGCCGGGCCGACGTGGCGGCGCATCGGCGCTGGGGCAAGGACGAGGTGGCGCTGCAGTGGGCGG CGGTGGAGGCGCTGGAGAAGCCCGGCGTCTACTGGCACCTGCTGCCCGAGGCGGCGCAGGGGCGCAAGGCGATCTGGGAC GCGGTGAACCCGCACACGGGCGTGCGGCGGATTAACGAGGCCTTCCCGATCCACGTGCGCAAGCGGACCCTGGACCAGGA GATGAAGGTCGAGCTGAACAACGGCTCGGTCTGGCAGGTGGTGGGATCGGACAACTACGACAGCCTGGTGGGCTCCTCGC CGCGGGGCGTGGTCTTTTCGGAGTGGTCGCTGTCGAAGCCGCAGGCCTGGGGGTTCATCCGGCCGATCCTGGCCGAGAAC GGCGGCTGGGCGCTGTTCCTCTGGACGCCGCGGGGGCGCAACCACGCCACGCGCGCCTTCGAGAGCCGGCAGCGGGAAGC GGGCTGGTTCTGCCTGAAGTCCCCGGCCACGGACACCGAGGTGTTCACGAAGGCGCAGCTGGACCAGGAGCGGGCCGAGC TGATCGCCGAGCTGGGCTCGCGGGAGGAGGGGGAGGCGCGCTTCGCCTCGGAGTACCTGGTGGACTTCGACGCCGCCGCG CCGGGCGCCTACTACGCGACGCTGCTGGGCGAGGCCGAACGCGCGGGGCGGATCGGCCGGGTTCCCTGGGATCCAGCCGC CCGTGTGGACACCGCCTGGGACCTCGGGATCGACGACTACACGGCGATCTGGTTCTTCCAGCAGGTGGGCCGGGAGGTCC GCGCGATCGACTATTTCGAGACCAGCGGCGAGGGCCTGCCAGAGATCGTCCGCCAGGCGATCGGGAGCAAGCCGTACCTG TGGGGGACCCACCACCTGCCGCACGACGTGATGGTGCGCGAGCTGGCGACCGGCCGCTCGCGCTACGAGACGCTGGCCTC GCTGGGGATGTCGGGGATCGCGGTGGGACAGGCGGCGGACCCGGAGGAGCGGGTGAACGCGGCGCGGCTGATGATCCCGC TCACCTGGTTCGACGCGGATGCCTGCCACCAGGGGCTCGAACGGCTGCGGACCTACCGCAAGCGGTGGAGCCGCGCGACC CACAGCTACGCCGGACCGCTGCACGACCAGGCCAGCCACGGAGCGGACGCCTTCGGGGAATTCGCCATGCACCGGCGTGG GGCGGCCGAGCCGCGACGGGCGGTGCGGAGCGCGGGCGGGCCGCTGTCCTGGATGGGCTAG
Upstream 100 bases:
>100_bases CGCAGGTCACCTACTACATCCGTCGCTTCGAGAAGTACGTGGGCGAGGACGGCCGCACCTATGTGCGCGAGGTCCCGCGC GAGCCCAAGCGGAGGCGCAA
Downstream 100 bases:
>100_bases ACGGCAAGGCGCCCCCGGCTTCGAGGCCGGGGGCGCCGTCCGGTGACACTGCGGCGCGCAGTCGGGGGCTCGTCGGCGCC GCAGCACCGTAACCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: PBSX Family Phage Terminase Large Subunit; Terminase Large Subunit Protein; Phage Terminase Large Subunit PBSX; Phage Terminase Large Subunit PBSX Family; Terminase Large Subunit; Phage Terminase; Phage Related Protein; Phage Terminase Large Subunit Pbsx; DNA Packaging Protein GP; DNA Packaging Protein Gp
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWD AVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAEN GGWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYL WGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRAT HSYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG
Sequences:
>Translated_446_residues MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWD AVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAEN GGWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYL WGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRAT HSYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG >Mature_445_residues SRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEKPGVYWHLLPEAAQGRKAIWDA VNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQVVGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENG GWALFLWTPRGRNHATRAFESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAAP GAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFETSGEGLPEIVRQAIGSKPYLW GTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAADPEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATH SYAGPLHDQASHGADAFGEFAMHRRGAAEPRRAVRSAGGPLSWMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50216; Mature: 50085
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEK CCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PGVYWHLLPEAAQGRKAIWDAVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQV CCCEEEECCCHHCCHHHHHHCCCCCHHHHHHHHCCCEEEHHHHCCCCCEEEECCCCEEEE VGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENGGWALFLWTPRGRNHATRAF ECCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHH ESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHEEHEEC TSGEGLPEIVRQAIGSKPYLWGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAAD CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCC PEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATHSYAGPLHDQASHGADAFGE HHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHH FAMHRRGAAEPRRAVRSAGGPLSWMG HHHHHCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure SRRRTREKGLPLTWEPRPHQVELWETLVDGCRRADVAAHRRWGKDEVALQWAAVEALEK CCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PGVYWHLLPEAAQGRKAIWDAVNPHTGVRRINEAFPIHVRKRTLDQEMKVELNNGSVWQV CCCEEEECCCHHCCHHHHHHCCCCCHHHHHHHHCCCEEEHHHHCCCCCEEEECCCCEEEE VGSDNYDSLVGSSPRGVVFSEWSLSKPQAWGFIRPILAENGGWALFLWTPRGRNHATRAF ECCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHH ESRQREAGWFCLKSPATDTEVFTKAQLDQERAELIAELGSREEGEARFASEYLVDFDAAA HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC PGAYYATLLGEAERAGRIGRVPWDPAARVDTAWDLGIDDYTAIWFFQQVGREVRAIDYFE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHEEHEEC TSGEGLPEIVRQAIGSKPYLWGTHHLPHDVMVRELATGRSRYETLASLGMSGIAVGQAAD CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCC PEERVNAARLMIPLTWFDADACHQGLERLRTYRKRWSRATHSYAGPLHDQASHGADAFGE HHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHH FAMHRRGAAEPRRAVRSAGGPLSWMG HHHHHCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA