Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105649

Identifier: 197105649

GI number: 197105649

Start: 2471939

End: 2473183

Strand: Direct

Name: 197105649

Synonym: PHZ_c2186

Alternate gene names: NA

Gene position: 2471939-2473183 (Clockwise)

Preceding gene: 197105648

Following gene: 197105650

Centisome position: 61.86

GC content: 72.37

Gene sequence:

>1245_bases
ATGCTGGTGCGCGAGGCGATCCAAGCCCGCCTGCCGGAGCCGAACGCCGGGTACGAACGGACGGCGGCGGCGCGCCTGCC
GGCCTTCCTCAAGTCCGATCAGCTGCGGGTCCGCACGCTGCTGCTGCAGCGGCTGTCCGCGTCCCGCCTGTTCGCGATCG
GCGACCGCGCGGGCGTGCTCAGCACCGCGCAGCGGCGTTCAGGCCGGTCGTTCCGGCTAGACCTGCGGCAACGGGTGATC
GTCAAGGCGCTGGTTTCCAAGCACACCGGCCACGGCGCCGCCCGCGGCGAGGCCCTGGCCAGGCACGTGGCCTATCTCGG
CCGGTCAGGGGCGGGCGTAGACGGAGCCCGGCCCGCCTTCTTCGATCGAGCGACGGACGATCTGGACGCATCCGCCGCCA
CCGCTGCCTGGGCGGCCGACCGGCACCACTTCCGCTTCATCGTCTCGCCCGAACACGGGGAGCGGATTTCCGACCTGACG
GGCTACACACGCGAGGTGATGCGCCGGGTGGCGGCCGACCTGGGTCAGCCCACGCTGCAGTGGTTGGGGACCTGCCACTT
CGACACGGATCAGCCGCACGCCCACGTGCTGGTGCGGGGAAGGCAGGCGAACGGCAGGGATCTGGTGATCCCGCGCGACT
ACATCGCCTATGGCTTCCGCGCGCGGGCGCAGGAGGTCGCTCAGGAACTGTTGGGCGACCTGTCGCGCGCCAATGCGGAG
CGGCGGATCTGGCGTGAGACCCATGCCGATCGCTTCACGGGCTTCGATCGCCGCCTGCTAGCCTCGGCGGACGGCGACGG
CCTTGTCGACGACGGGTTGGGACAGGGCGGGGCCTGGGCGGCGCTGCTGCGGGGCCGCCTGCGCCACCTCGAGGCGCTGG
GGCTCGCCACGCGTCAGGGCCGGCGCTATCGGCTCGATCCGTCGCTGGAGCCTCAACTCCGCGCCCTGCAGCTGAAGCGC
GACATCATCCGGACCCTTCATGCGCGCCGGCTGGAGGGCGGCCGAAAAGTTCGGGAGCTGGGCGTCGGCGAGCGGGTCCG
CGGGCGTGTCGTCGCGACCGGCGAGCACGATGAGCTCGGCGCGCTCCGCTGGGTGGTGGTGCGCGACGCCGAGGGCGCGG
AGCGCTACACGCGGCTGGCCTTCCGAAGCGACGCAATGCGAGTGGGCCAGACGGCGGAGCTGGTGGGGGGCCTACAAGGC
GCCCAGGTGATCGGCCGCACCCGGTCTTCGGGTCTTTCCCGCTGA

Upstream 100 bases:

>100_bases
GCTTCGTTTTGCTCTAGGCTTTCAGCCGGTTAGGGCCGCGACCGCCGCATGAGGCGAGTTGCGGCGACGTAAGCTGTCAG
CAGCCGCCGGAGCCTTTCCC

Downstream 100 bases:

>100_bases
CTCTAGGTGGCGCATGACATCACGTTTTCGGGAGCGCAGGCTCCACGCGGCGCCGCGTGAACCAGGAAGAAGACGCCGCC
CGTCCCGCCTTCAGGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLVREAIQARLPEPNAGYERTAAARLPAFLKSDQLRVRTLLLQRLSASRLFAIGDRAGVLSTAQRRSGRSFRLDLRQRVI
VKALVSKHTGHGAARGEALARHVAYLGRSGAGVDGARPAFFDRATDDLDASAATAAWAADRHHFRFIVSPEHGERISDLT
GYTREVMRRVAADLGQPTLQWLGTCHFDTDQPHAHVLVRGRQANGRDLVIPRDYIAYGFRARAQEVAQELLGDLSRANAE
RRIWRETHADRFTGFDRRLLASADGDGLVDDGLGQGGAWAALLRGRLRHLEALGLATRQGRRYRLDPSLEPQLRALQLKR
DIIRTLHARRLEGGRKVRELGVGERVRGRVVATGEHDELGALRWVVVRDAEGAERYTRLAFRSDAMRVGQTAELVGGLQG
AQVIGRTRSSGLSR

Sequences:

>Translated_414_residues
MLVREAIQARLPEPNAGYERTAAARLPAFLKSDQLRVRTLLLQRLSASRLFAIGDRAGVLSTAQRRSGRSFRLDLRQRVI
VKALVSKHTGHGAARGEALARHVAYLGRSGAGVDGARPAFFDRATDDLDASAATAAWAADRHHFRFIVSPEHGERISDLT
GYTREVMRRVAADLGQPTLQWLGTCHFDTDQPHAHVLVRGRQANGRDLVIPRDYIAYGFRARAQEVAQELLGDLSRANAE
RRIWRETHADRFTGFDRRLLASADGDGLVDDGLGQGGAWAALLRGRLRHLEALGLATRQGRRYRLDPSLEPQLRALQLKR
DIIRTLHARRLEGGRKVRELGVGERVRGRVVATGEHDELGALRWVVVRDAEGAERYTRLAFRSDAMRVGQTAELVGGLQG
AQVIGRTRSSGLSR
>Mature_414_residues
MLVREAIQARLPEPNAGYERTAAARLPAFLKSDQLRVRTLLLQRLSASRLFAIGDRAGVLSTAQRRSGRSFRLDLRQRVI
VKALVSKHTGHGAARGEALARHVAYLGRSGAGVDGARPAFFDRATDDLDASAATAAWAADRHHFRFIVSPEHGERISDLT
GYTREVMRRVAADLGQPTLQWLGTCHFDTDQPHAHVLVRGRQANGRDLVIPRDYIAYGFRARAQEVAQELLGDLSRANAE
RRIWRETHADRFTGFDRRLLASADGDGLVDDGLGQGGAWAALLRGRLRHLEALGLATRQGRRYRLDPSLEPQLRALQLKR
DIIRTLHARRLEGGRKVRELGVGERVRGRVVATGEHDELGALRWVVVRDAEGAERYTRLAFRSDAMRVGQTAELVGGLQG
AQVIGRTRSSGLSR

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45871; Mature: 45871

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVREAIQARLPEPNAGYERTAAARLPAFLKSDQLRVRTLLLQRLSASRLFAIGDRAGVL
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCHH
STAQRRSGRSFRLDLRQRVIVKALVSKHTGHGAARGEALARHVAYLGRSGAGVDGARPAF
HHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
FDRATDDLDASAATAAWAADRHHFRFIVSPEHGERISDLTGYTREVMRRVAADLGQPTLQ
HCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WLGTCHFDTDQPHAHVLVRGRQANGRDLVIPRDYIAYGFRARAQEVAQELLGDLSRANAE
HHEEECCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RRIWRETHADRFTGFDRRLLASADGDGLVDDGLGQGGAWAALLRGRLRHLEALGLATRQG
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RRYRLDPSLEPQLRALQLKRDIIRTLHARRLEGGRKVRELGVGERVRGRVVATGEHDELG
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCEEECCCCCCCC
ALRWVVVRDAEGAERYTRLAFRSDAMRVGQTAELVGGLQGAQVIGRTRSSGLSR
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLVREAIQARLPEPNAGYERTAAARLPAFLKSDQLRVRTLLLQRLSASRLFAIGDRAGVL
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCHH
STAQRRSGRSFRLDLRQRVIVKALVSKHTGHGAARGEALARHVAYLGRSGAGVDGARPAF
HHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
FDRATDDLDASAATAAWAADRHHFRFIVSPEHGERISDLTGYTREVMRRVAADLGQPTLQ
HCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WLGTCHFDTDQPHAHVLVRGRQANGRDLVIPRDYIAYGFRARAQEVAQELLGDLSRANAE
HHEEECCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RRIWRETHADRFTGFDRRLLASADGDGLVDDGLGQGGAWAALLRGRLRHLEALGLATRQG
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RRYRLDPSLEPQLRALQLKRDIIRTLHARRLEGGRKVRELGVGERVRGRVVATGEHDELG
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCEEECCCCCCCC
ALRWVVVRDAEGAERYTRLAFRSDAMRVGQTAELVGGLQGAQVIGRTRSSGLSR
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA