| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105630
Identifier: 197105630
GI number: 197105630
Start: 2441799
End: 2442599
Strand: Direct
Name: 197105630
Synonym: PHZ_c2167
Alternate gene names: NA
Gene position: 2441799-2442599 (Clockwise)
Preceding gene: 197105628
Following gene: 197105631
Centisome position: 61.1
GC content: 75.41
Gene sequence:
>801_bases ATGGCGCTGGGGAGCGCAGCGAGCGCCCCGCGCGGCTTCGTCGAATTCTGCGAACGCCAGCCGGCCGACTGCGGCGCGAC GACGGAGGAGCTGGCGACGCTGCGGGACTCGAGCGTCCAGCAGGCCACGATGGCCGGCCCCATACCGGTCCGCTTCGACT GGAGCGGCGTCTTCGGCGCCACCGGCGCGGTCAGCCCGGCCGCAGCCCCGCGGCCGCCGGTCGCCGGCGGGGAGCTGGCG GCGGTCTCGTTCGACTGGTCGGCGACCTTCGCCAAGCAGCCGACCGCGGCGGCGCCCGTCGTGGAGGCGGCGACCGAAGC CTCCCCGGAACCGGCGGCCGCCGCGCCCGCCGAGGCGCTCGCCCTGACGCCGCAGCTTTGGGCGCAGGTCGTCCGCGCCA ACGACCAGGTGAACCGCGCGATCGCCCAGAAGACCGACGCCGAAGCCTATGGCGCGCCGGAGTTCTGGAGCCTGCCGATC GCCGCCGGCGCCCGCTACGGCGACTGCGAGGACTATGTGCTCGAGAAGCGCCGCGCCCTGCTGGCCGCCGGCGTTCCCCA GCGGGCTCTGTCGATCGCCGTCGTGAACACGCCCGAGGGCGACGCCCACGCCGTCCTGCTGGTCGAGACGGCCGCCGGCG CCTACGTGCTCGACAACCTGACCCCTTGGGTCCTGCCGTGGACCAAGACCGCCTATCGGTGGCGTGAGCGCCAGGTGGCG GGCTCTGCGGCGCGATGGGCTATGGCCGCCCCCGGCGCCCAGCCGGCCGACGCCGCTCTCTTGCTCGCCAGCCTCCGGTA G
Upstream 100 bases:
>100_bases GGTGGTGTCTTATATCAGAACAGTTGCGCAGTACGCGCTCATGCTTGGTCTTGGCCTCTCCGCCGCCGCCTGCGCGACGA TGCCGGAGCCTTCGGCCCCG
Downstream 100 bases:
>100_bases GGTCTCCTCCGCCGACGAGCGGGGGCGACGTGCAGATTCGGCCGGAGACAGGGCGTCCGGCGGCGTGGTGGACGCCGCGA TGGTGGATGCAGGATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MALGSAASAPRGFVEFCERQPADCGATTEELATLRDSSVQQATMAGPIPVRFDWSGVFGATGAVSPAAAPRPPVAGGELA AVSFDWSATFAKQPTAAAPVVEAATEASPEPAAAAPAEALALTPQLWAQVVRANDQVNRAIAQKTDAEAYGAPEFWSLPI AAGARYGDCEDYVLEKRRALLAAGVPQRALSIAVVNTPEGDAHAVLLVETAAGAYVLDNLTPWVLPWTKTAYRWRERQVA GSAARWAMAAPGAQPADAALLLASLR
Sequences:
>Translated_266_residues MALGSAASAPRGFVEFCERQPADCGATTEELATLRDSSVQQATMAGPIPVRFDWSGVFGATGAVSPAAAPRPPVAGGELA AVSFDWSATFAKQPTAAAPVVEAATEASPEPAAAAPAEALALTPQLWAQVVRANDQVNRAIAQKTDAEAYGAPEFWSLPI AAGARYGDCEDYVLEKRRALLAAGVPQRALSIAVVNTPEGDAHAVLLVETAAGAYVLDNLTPWVLPWTKTAYRWRERQVA GSAARWAMAAPGAQPADAALLLASLR >Mature_265_residues ALGSAASAPRGFVEFCERQPADCGATTEELATLRDSSVQQATMAGPIPVRFDWSGVFGATGAVSPAAAPRPPVAGGELAA VSFDWSATFAKQPTAAAPVVEAATEASPEPAAAAPAEALALTPQLWAQVVRANDQVNRAIAQKTDAEAYGAPEFWSLPIA AGARYGDCEDYVLEKRRALLAAGVPQRALSIAVVNTPEGDAHAVLLVETAAGAYVLDNLTPWVLPWTKTAYRWRERQVAG SAARWAMAAPGAQPADAALLLASLR
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27618; Mature: 27487
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGSAASAPRGFVEFCERQPADCGATTEELATLRDSSVQQATMAGPIPVRFDWSGVFGA CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCC TGAVSPAAAPRPPVAGGELAAVSFDWSATFAKQPTAAAPVVEAATEASPEPAAAAPAEAL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH ALTPQLWAQVVRANDQVNRAIAQKTDAEAYGAPEFWSLPIAAGARYGDCEDYVLEKRRAL EECHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEECCHHCCCCCCCHHHHHHHHHHHH LAAGVPQRALSIAVVNTPEGDAHAVLLVETAAGAYVLDNLTPWVLPWTKTAYRWRERQVA HHCCCCCHHEEEEEEECCCCCCEEEEEEEECCCEEEECCCCCCEECCCHHHHHHHHHHHC GSAARWAMAAPGAQPADAALLLASLR CCHHHHHEECCCCCCHHHHHHHHHCC >Mature Secondary Structure ALGSAASAPRGFVEFCERQPADCGATTEELATLRDSSVQQATMAGPIPVRFDWSGVFGA CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCC TGAVSPAAAPRPPVAGGELAAVSFDWSATFAKQPTAAAPVVEAATEASPEPAAAAPAEAL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH ALTPQLWAQVVRANDQVNRAIAQKTDAEAYGAPEFWSLPIAAGARYGDCEDYVLEKRRAL EECHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEECCHHCCCCCCCHHHHHHHHHHHH LAAGVPQRALSIAVVNTPEGDAHAVLLVETAAGAYVLDNLTPWVLPWTKTAYRWRERQVA HHCCCCCHHEEEEEEECCCCCCEEEEEEEECCCEEEECCCCCCEECCCHHHHHHHHHHHC GSAARWAMAAPGAQPADAALLLASLR CCHHHHHEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA