| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is iolE [H]
Identifier: 197105617
GI number: 197105617
Start: 2425050
End: 2426111
Strand: Reverse
Name: iolE [H]
Synonym: PHZ_c2154
Alternate gene names: 197105617
Gene position: 2426111-2425050 (Counterclockwise)
Preceding gene: 197105618
Following gene: 197105616
Centisome position: 60.71
GC content: 72.03
Gene sequence:
>1062_bases ATGAGGACGCTGAAGGGGCCCGGGATCTTCCTCGCCCAGTTCGTGGGACCGGAGCCGCCGTTCGATCGGCTGGAGACGCT GGCCGACTGGGCCGCGGGCCTGGGGTACGTGGGCCTGCAGCTGCCGACCGGCGTCGGGGGCCTCTTCGACGTGGAGCGGG GCGCCGAGAGCCAGGCCTACTGCGACGACGTCAAGGGCATGCTGGCCGACAAGGGCCTCGCCATCACCGAGCTCTCCACC CACCTGCAGGGCCAGCTCGTGGCGGTGCATCCGGCGTACGACGAGCTGTTCGACGGATTCGCGCCGCCGCAGGTGCGCGG CAGGCCCGCCGAGCGCCAGGCCTGGGCGACGGCCCAGCTGAAGGCCGCGGCGAAGGCCAGCCGGCGGCTCGGCCTGTCCG CCCACGCCACCTTCTCGGGCGCCCTGGCCTGGCCCTATGTCTATCCCTGGCCGCAACGGCCGGCGGGCCTGATCGAGGAG GCCTTCGCCGAACTGGCGCGGCGCTGGCGGCCGATCCTCGACGCGTTCGACGAGGCAGGCGTCGACGCCTGCTACGAGAT CCATCCCGGCGAGGACCTGCACGACGGGGCGACCTTCGAGCGGTTCCTGGATGCGGTCGGCGGCCACCCGCGCGCCAGCA TCCTCTACGACCCCAGCCACTTCGTGCTGCAGCAGCTCGACTACCTGGCCTTCATCGACCGCTATCACAACCGGATCCGC GCCTTCCACGTGAAGGACGCCGAGTTCCGGCCGACCGGGCGCGCCGGCGTCTACGGCGGCTATCTCGGTTGGGTGGACCG GCCCGGTCGCTTCCGCTCGCTGGGCGACGGCCAAGTCGATTTCGGCGCGATCTTCTCGAAGCTGGCCGCCTACGACTATC CCGGCTGGGCGGTGCTGGAGTGGGAGTGCGCGCTCAAGCACCCCGAGGACGGCGCGCGCGAGGGCGCGCCCTTCATCCGC GACCACATCATCCGCGTGACCGAGCGGGCGTTCGACGACTTCGCCGGCGCGGGCACGGACGCGGCCGCCAACCGGCGACT TCTTGGGCTGGGGGACGCTTGA
Upstream 100 bases:
>100_bases CCGATATCGAGGAGGGCGTCCGCAGCATGGCCTTCGTGGAGACCGCCGTCGCCGCCAGCCGCGACGAGTCCGGCTGGGTC GCGCTGGACGGGAGGATCGC
Downstream 100 bases:
>100_bases GATGGCCAACCTGAACAACCGCGCGCGGGCCGAGCGAACCTACGACGCCATCGTGGTCGGCAGCGGGATCACCGGCGGCT GGGCGGCCAAGGAGCTGACC
Product: sugar phosphate isomerase/epimerase
Products: NA
Alternate protein names: 2-keto-myo-inositol dehydratase; 2KMI dehydratase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MRTLKGPGIFLAQFVGPEPPFDRLETLADWAAGLGYVGLQLPTGVGGLFDVERGAESQAYCDDVKGMLADKGLAITELST HLQGQLVAVHPAYDELFDGFAPPQVRGRPAERQAWATAQLKAAAKASRRLGLSAHATFSGALAWPYVYPWPQRPAGLIEE AFAELARRWRPILDAFDEAGVDACYEIHPGEDLHDGATFERFLDAVGGHPRASILYDPSHFVLQQLDYLAFIDRYHNRIR AFHVKDAEFRPTGRAGVYGGYLGWVDRPGRFRSLGDGQVDFGAIFSKLAAYDYPGWAVLEWECALKHPEDGAREGAPFIR DHIIRVTERAFDDFAGAGTDAAANRRLLGLGDA
Sequences:
>Translated_353_residues MRTLKGPGIFLAQFVGPEPPFDRLETLADWAAGLGYVGLQLPTGVGGLFDVERGAESQAYCDDVKGMLADKGLAITELST HLQGQLVAVHPAYDELFDGFAPPQVRGRPAERQAWATAQLKAAAKASRRLGLSAHATFSGALAWPYVYPWPQRPAGLIEE AFAELARRWRPILDAFDEAGVDACYEIHPGEDLHDGATFERFLDAVGGHPRASILYDPSHFVLQQLDYLAFIDRYHNRIR AFHVKDAEFRPTGRAGVYGGYLGWVDRPGRFRSLGDGQVDFGAIFSKLAAYDYPGWAVLEWECALKHPEDGAREGAPFIR DHIIRVTERAFDDFAGAGTDAAANRRLLGLGDA >Mature_353_residues MRTLKGPGIFLAQFVGPEPPFDRLETLADWAAGLGYVGLQLPTGVGGLFDVERGAESQAYCDDVKGMLADKGLAITELST HLQGQLVAVHPAYDELFDGFAPPQVRGRPAERQAWATAQLKAAAKASRRLGLSAHATFSGALAWPYVYPWPQRPAGLIEE AFAELARRWRPILDAFDEAGVDACYEIHPGEDLHDGATFERFLDAVGGHPRASILYDPSHFVLQQLDYLAFIDRYHNRIR AFHVKDAEFRPTGRAGVYGGYLGWVDRPGRFRSLGDGQVDFGAIFSKLAAYDYPGWAVLEWECALKHPEDGAREGAPFIR DHIIRVTERAFDDFAGAGTDAAANRRLLGLGDA
Specific function: Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.44 [H]
Molecular weight: Translated: 38755; Mature: 38755
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLKGPGIFLAQFVGPEPPFDRLETLADWAAGLGYVGLQLPTGVGGLFDVERGAESQAY CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCHHH CDDVKGMLADKGLAITELSTHLQGQLVAVHPAYDELFDGFAPPQVRGRPAERQAWATAQL HHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHH KAAAKASRRLGLSAHATFSGALAWPYVYPWPQRPAGLIEEAFAELARRWRPILDAFDEAG HHHHHHHHHCCCEECCCCCCCEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC VDACYEIHPGEDLHDGATFERFLDAVGGHPRASILYDPSHFVLQQLDYLAFIDRYHNRIR CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHE AFHVKDAEFRPTGRAGVYGGYLGWVDRPGRFRSLGDGQVDFGAIFSKLAAYDYPGWAVLE EEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE WECALKHPEDGAREGAPFIRDHIIRVTERAFDDFAGAGTDAAANRRLLGLGDA EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCC >Mature Secondary Structure MRTLKGPGIFLAQFVGPEPPFDRLETLADWAAGLGYVGLQLPTGVGGLFDVERGAESQAY CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCHHH CDDVKGMLADKGLAITELSTHLQGQLVAVHPAYDELFDGFAPPQVRGRPAERQAWATAQL HHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHH KAAAKASRRLGLSAHATFSGALAWPYVYPWPQRPAGLIEEAFAELARRWRPILDAFDEAG HHHHHHHHHCCCEECCCCCCCEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC VDACYEIHPGEDLHDGATFERFLDAVGGHPRASILYDPSHFVLQQLDYLAFIDRYHNRIR CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHE AFHVKDAEFRPTGRAGVYGGYLGWVDRPGRFRSLGDGQVDFGAIFSKLAAYDYPGWAVLE EEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE WECALKHPEDGAREGAPFIRDHIIRVTERAFDDFAGAGTDAAANRRLLGLGDA EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA