| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is fepA [C]
Identifier: 197105602
GI number: 197105602
Start: 2407142
End: 2409532
Strand: Reverse
Name: fepA [C]
Synonym: PHZ_c2139
Alternate gene names: 197105602
Gene position: 2409532-2407142 (Counterclockwise)
Preceding gene: 197105604
Following gene: 197105601
Centisome position: 60.29
GC content: 67.75
Gene sequence:
>2391_bases ATGAACCACAAGCGGTACTTGCTGGCCTTGCTGTCGACCACCAGCCTGCTGGGGGTCGCCTCGCCGGCGCTGACCCAGGC CGGCGGCGAGACGACGGCGGTCGAGGAACTGATCGTCACCGCCCAGCGTCGCGAGCAGAGCCTGCTCGACGTGCCGCTGT CGGTGGCCGTGGTCGGCGGCGACACGTTGCGGGACGCGAACCTCGCCAGCGTGACCGAACTCACTCAGCTGGCCGCGGGC CTGACCTACAACACCAACTTCGGCGGCGGCTTCCTGATCCGCGGCGTGGGGACCCAGTCGGTCCTCATCTCGAGCGAGCA GAGCGTCTCCATCGTCATCGACGACATCGTGCAGGGGCTGCCCGAGATCAGCTTCGCCGGTCCGTCCTACCAGGCCCTGA CCGACATCGAGCGGGTCGAGGTGCTGCGCGGGCCGCAGGGCACGCTGTTCGGCAAGAACAGCTCGGCCGGCGTGGTCCAG ATCATCACCAAGAAGCCGTCGCTGGGCGAATACCTCGGCGACGCCACGGTCTCCTACGCCACCGACAACGAGATGCGGGT CGGCGCCAACGTCAACATCCCGCTCGGCGAGACGGCGGCCTTCCGGCTTTCGGGCTTCGTGAACCGCCGCGACGGCTTTG TGGAGAACCGCTTCACCGGCAAGGACCTCTCCGGCTACACGATGCGCGGCTGGCGGGCCAAGCTGCTCTGGAAGCCGACC GACCGGGCCGAGCTCTACCTGGTCGGCGCCCACATCGAGAACGAGGACTCCGGCAACGGCATCTGGACGCTCCGCAGCTG CGGCAGCGGCTTCAGCGGCACGCAGGGGGTCATCGTTCCCTGCAACGAGGTGGCCAAGTACGGCGTTACGGCCGGCCCGA AGAACCTCGCCGGGGCCTGGGACGGCCCCACCGGGGTGAAGACGGTCAACGACAGCGTCTCCGGCCGCCTGACCTACGAC CTCGGCGGCGGGGCGGTGCTGAAGGCGATCACCGGCTACTACGAGATCGACACGAACGAGGACCTCGAGGTCGACTCATC GCCGCGGCGGATCCTCTCCACCAACGTGACCCAGCTTCGCCAGCGGCAGTTCAGCCAGGAGCTGCGGCTGGAGGGCACCT ACGGCAACCTCGACTACACGGTGGGCGGTTTCTACTACAAGTCGCGCAACCTCACGATCGGCCTGCAGGCCGGCACCTTC GCCCTCATTCCCGACAGCTCGCCCATCAGCCTGACCACCGCCTTCGGTCCCGTCCGGTGCTGCATCTCCGCGCAGGACTC GACCACCGAGAGCCTGGCCGCGTTCTCCCAGGGGACGCTGCGGCTGCTCGACGACCGGCTCTCGATCACGGGCGGCATCC GCTACACCGACGACAAGGTGTCCCTGGACAGCATCGCCTACGACGCCGGCAACGTGTGCCAGGTGGCGTTCGCCCTGGGC GGCGCCTGCAAGGTCCCCGGCATGAACGAGGTCGCGACGCGTTCGAAGAGCGTGGACGACGTCTCGGGACGCGTTTCGGT CCAGTACGAGGTCGTGCCAGACGTGAACGTCTATGCGACCTACTCGACGGGCTACAAGGGTCCGCTCATCTCCTACGCGC GCGGTCAGCCGCTGTTCGAGGTCGACGCCGAGACGGTCACCAACTACGAAGTCGGCCTGAAGGGCGCCTTCTTCGACCGC CGGCTGGTGGCCACGGTCGCGCTCTTCCGCTCCCGCTATTCCAACTTCCAGGGCCAGACCACGGTCGTCGACCCGAACAA CCCGGCGGTGCGCAGCCTGATCACCACCAACGCCGGGGGGCTGAAGACCAAGGGCCTCGAGGCGGACGTCGTCTTCCAGG CGACCCCGGAGCTGACCCTTCGCGGCGCGTACGCCTACGTGCCGACCGAGTACATCGACTTCGCCATCCAGTGTAACGAC CGCTACGCCAACCCGGCGACCGTTCCGGGGCAGTGCACCTACATCAGCCCGCGGGCGCCGGGCGTGCTGCAGTTCAACGC CGGCGGCTATCCCCTGGTCTTCGCGCCCAAGCACACCTTCAACGTGGGCCTGAACTACGAGCGTCCCGTCCTGGGCGAGT ACCTGTTCGGCGCCTCGCTGACCTACAACTGGCGTGACGAGACCTACACGGGGGCTGCGGACCCCAACAGCATCGTGCCG TCCTACGGCCTGCTGGGCGCGAATGTCAGCTTCGGACCCGACGACGGTCGCTGGCGGGTGAGCGGCTTCGCCCGCAACCT GCTCGACGAGTACTTCGTCACCGGCATCTTCAAGACGCCTCTGGACGCCGGGACCGCCGGCAGCACCCCGCTGTCGACCG TCGGCTACTCCAACATCCCCTCGATCGAGAGCAGCCGTACGGTGGGGGTGAAGCTCGAGGTCAACTTCTGA
Upstream 100 bases:
>100_bases TGTGTATGCATTGAGGGAGTAAACGGGCGAGGGGCCAACCCTCGCCGATCAAAGCGCTGTCGCGGATCGGCCCTGCAGAG GCCAACGGGGAGGGAAGTAG
Downstream 100 bases:
>100_bases TCGTCGGCGGTTCGCCGCCAGTGACGGACGCGGGCTGCGGACCCTCCCCCCGCAGCTGCGCGCAATGGAGCGGCCCCAGC GGCCGCTCCTCTTCTTTTTC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug; NB Dependent Receptor; Outer Membrane Receptor Family Protein; NB-Dependent Receptor Plug Domain Protein; NB-Dependent Receptor Protein; Nb-Dependent Receptor; Outer Membrane Protein; Transporter OMR Family; NB-Dependent Outer Membrane Receptor; NB Dependent Receptor Protein; NB-Dependent Siderophore Receptor
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MNHKRYLLALLSTTSLLGVASPALTQAGGETTAVEELIVTAQRREQSLLDVPLSVAVVGGDTLRDANLASVTELTQLAAG LTYNTNFGGGFLIRGVGTQSVLISSEQSVSIVIDDIVQGLPEISFAGPSYQALTDIERVEVLRGPQGTLFGKNSSAGVVQ IITKKPSLGEYLGDATVSYATDNEMRVGANVNIPLGETAAFRLSGFVNRRDGFVENRFTGKDLSGYTMRGWRAKLLWKPT DRAELYLVGAHIENEDSGNGIWTLRSCGSGFSGTQGVIVPCNEVAKYGVTAGPKNLAGAWDGPTGVKTVNDSVSGRLTYD LGGGAVLKAITGYYEIDTNEDLEVDSSPRRILSTNVTQLRQRQFSQELRLEGTYGNLDYTVGGFYYKSRNLTIGLQAGTF ALIPDSSPISLTTAFGPVRCCISAQDSTTESLAAFSQGTLRLLDDRLSITGGIRYTDDKVSLDSIAYDAGNVCQVAFALG GACKVPGMNEVATRSKSVDDVSGRVSVQYEVVPDVNVYATYSTGYKGPLISYARGQPLFEVDAETVTNYEVGLKGAFFDR RLVATVALFRSRYSNFQGQTTVVDPNNPAVRSLITTNAGGLKTKGLEADVVFQATPELTLRGAYAYVPTEYIDFAIQCND RYANPATVPGQCTYISPRAPGVLQFNAGGYPLVFAPKHTFNVGLNYERPVLGEYLFGASLTYNWRDETYTGAADPNSIVP SYGLLGANVSFGPDDGRWRVSGFARNLLDEYFVTGIFKTPLDAGTAGSTPLSTVGYSNIPSIESSRTVGVKLEVNF
Sequences:
>Translated_796_residues MNHKRYLLALLSTTSLLGVASPALTQAGGETTAVEELIVTAQRREQSLLDVPLSVAVVGGDTLRDANLASVTELTQLAAG LTYNTNFGGGFLIRGVGTQSVLISSEQSVSIVIDDIVQGLPEISFAGPSYQALTDIERVEVLRGPQGTLFGKNSSAGVVQ IITKKPSLGEYLGDATVSYATDNEMRVGANVNIPLGETAAFRLSGFVNRRDGFVENRFTGKDLSGYTMRGWRAKLLWKPT DRAELYLVGAHIENEDSGNGIWTLRSCGSGFSGTQGVIVPCNEVAKYGVTAGPKNLAGAWDGPTGVKTVNDSVSGRLTYD LGGGAVLKAITGYYEIDTNEDLEVDSSPRRILSTNVTQLRQRQFSQELRLEGTYGNLDYTVGGFYYKSRNLTIGLQAGTF ALIPDSSPISLTTAFGPVRCCISAQDSTTESLAAFSQGTLRLLDDRLSITGGIRYTDDKVSLDSIAYDAGNVCQVAFALG GACKVPGMNEVATRSKSVDDVSGRVSVQYEVVPDVNVYATYSTGYKGPLISYARGQPLFEVDAETVTNYEVGLKGAFFDR RLVATVALFRSRYSNFQGQTTVVDPNNPAVRSLITTNAGGLKTKGLEADVVFQATPELTLRGAYAYVPTEYIDFAIQCND RYANPATVPGQCTYISPRAPGVLQFNAGGYPLVFAPKHTFNVGLNYERPVLGEYLFGASLTYNWRDETYTGAADPNSIVP SYGLLGANVSFGPDDGRWRVSGFARNLLDEYFVTGIFKTPLDAGTAGSTPLSTVGYSNIPSIESSRTVGVKLEVNF >Mature_796_residues MNHKRYLLALLSTTSLLGVASPALTQAGGETTAVEELIVTAQRREQSLLDVPLSVAVVGGDTLRDANLASVTELTQLAAG LTYNTNFGGGFLIRGVGTQSVLISSEQSVSIVIDDIVQGLPEISFAGPSYQALTDIERVEVLRGPQGTLFGKNSSAGVVQ IITKKPSLGEYLGDATVSYATDNEMRVGANVNIPLGETAAFRLSGFVNRRDGFVENRFTGKDLSGYTMRGWRAKLLWKPT DRAELYLVGAHIENEDSGNGIWTLRSCGSGFSGTQGVIVPCNEVAKYGVTAGPKNLAGAWDGPTGVKTVNDSVSGRLTYD LGGGAVLKAITGYYEIDTNEDLEVDSSPRRILSTNVTQLRQRQFSQELRLEGTYGNLDYTVGGFYYKSRNLTIGLQAGTF ALIPDSSPISLTTAFGPVRCCISAQDSTTESLAAFSQGTLRLLDDRLSITGGIRYTDDKVSLDSIAYDAGNVCQVAFALG GACKVPGMNEVATRSKSVDDVSGRVSVQYEVVPDVNVYATYSTGYKGPLISYARGQPLFEVDAETVTNYEVGLKGAFFDR RLVATVALFRSRYSNFQGQTTVVDPNNPAVRSLITTNAGGLKTKGLEADVVFQATPELTLRGAYAYVPTEYIDFAIQCND RYANPATVPGQCTYISPRAPGVLQFNAGGYPLVFAPKHTFNVGLNYERPVLGEYLFGASLTYNWRDETYTGAADPNSIVP SYGLLGANVSFGPDDGRWRVSGFARNLLDEYFVTGIFKTPLDAGTAGSTPLSTVGYSNIPSIESSRTVGVKLEVNF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85278; Mature: 85278
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHKRYLLALLSTTSLLGVASPALTQAGGETTAVEELIVTAQRREQSLLDVPLSVAVVGG CCCCEEEEEEHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC DTLRDANLASVTELTQLAAGLTYNTNFGGGFLIRGVGTQSVLISSEQSVSIVIDDIVQGL CCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHCC PEISFAGPSYQALTDIERVEVLRGPQGTLFGKNSSAGVVQIITKKPSLGEYLGDATVSYA CCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCHHHHHCCCEEEEE TDNEMRVGANVNIPLGETAAFRLSGFVNRRDGFVENRFTGKDLSGYTMRGWRAKLLWKPT CCCCEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCC DRAELYLVGAHIENEDSGNGIWTLRSCGSGFSGTQGVIVPCNEVAKYGVTAGPKNLAGAW CCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCC DGPTGVKTVNDSVSGRLTYDLGGGAVLKAITGYYEIDTNEDLEVDSSPRRILSTNVTQLR CCCCCCEEECCCCCCEEEEEECCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHCCHHHHH QRQFSQELRLEGTYGNLDYTVGGFYYKSRNLTIGLQAGTFALIPDSSPISLTTAFGPVRC HHHHHHHHEEEECCCCCEEEEEEEEEECCCEEEEEECCEEEEECCCCCCEEEECCCCEEE CISAQDSTTESLAAFSQGTLRLLDDRLSITGGIRYTDDKVSLDSIAYDAGNVCQVAFALG EEECCCCCHHHHHHHCCCCEEEEECCEEEECCEEECCCCCCHHHEECCCCCCEEEEECCC GACKVPGMNEVATRSKSVDDVSGRVSVQYEVVPDVNVYATYSTGYKGPLISYARGQPLFE CEECCCCCHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEEECCCCCEEEE VDAETVTNYEVGLKGAFFDRRLVATVALFRSRYSNFQGQTTVVDPNNPAVRSLITTNAGG ECCCCCCEEEECCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHEEECCCCC LKTKGLEADVVFQATPELTLRGAYAYVPTEYIDFAIQCNDRYANPATVPGQCTYISPRAP CEECCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC GVLQFNAGGYPLVFAPKHTFNVGLNYERPVLGEYLFGASLTYNWRDETYTGAADPNSIVP CEEEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCEEEECCCCCCEECCCCCCCCCC SYGLLGANVSFGPDDGRWRVSGFARNLLDEYFVTGIFKTPLDAGTAGSTPLSTVGYSNIP CCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC SIESSRTVGVKLEVNF CCCCCCEEEEEEEECC >Mature Secondary Structure MNHKRYLLALLSTTSLLGVASPALTQAGGETTAVEELIVTAQRREQSLLDVPLSVAVVGG CCCCEEEEEEHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC DTLRDANLASVTELTQLAAGLTYNTNFGGGFLIRGVGTQSVLISSEQSVSIVIDDIVQGL CCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHCC PEISFAGPSYQALTDIERVEVLRGPQGTLFGKNSSAGVVQIITKKPSLGEYLGDATVSYA CCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCHHHHHCCCEEEEE TDNEMRVGANVNIPLGETAAFRLSGFVNRRDGFVENRFTGKDLSGYTMRGWRAKLLWKPT CCCCEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCC DRAELYLVGAHIENEDSGNGIWTLRSCGSGFSGTQGVIVPCNEVAKYGVTAGPKNLAGAW CCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCC DGPTGVKTVNDSVSGRLTYDLGGGAVLKAITGYYEIDTNEDLEVDSSPRRILSTNVTQLR CCCCCCEEECCCCCCEEEEEECCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHCCHHHHH QRQFSQELRLEGTYGNLDYTVGGFYYKSRNLTIGLQAGTFALIPDSSPISLTTAFGPVRC HHHHHHHHEEEECCCCCEEEEEEEEEECCCEEEEEECCEEEEECCCCCCEEEECCCCEEE CISAQDSTTESLAAFSQGTLRLLDDRLSITGGIRYTDDKVSLDSIAYDAGNVCQVAFALG EEECCCCCHHHHHHHCCCCEEEEECCEEEECCEEECCCCCCHHHEECCCCCCEEEEECCC GACKVPGMNEVATRSKSVDDVSGRVSVQYEVVPDVNVYATYSTGYKGPLISYARGQPLFE CEECCCCCHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEEECCCCCEEEE VDAETVTNYEVGLKGAFFDRRLVATVALFRSRYSNFQGQTTVVDPNNPAVRSLITTNAGG ECCCCCCEEEECCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHEEECCCCC LKTKGLEADVVFQATPELTLRGAYAYVPTEYIDFAIQCNDRYANPATVPGQCTYISPRAP CEECCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC GVLQFNAGGYPLVFAPKHTFNVGLNYERPVLGEYLFGASLTYNWRDETYTGAADPNSIVP CEEEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCEEEECCCCCCEECCCCCCCCCC SYGLLGANVSFGPDDGRWRVSGFARNLLDEYFVTGIFKTPLDAGTAGSTPLSTVGYSNIP CCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC SIESSRTVGVKLEVNF CCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA