| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ilvB [H]
Identifier: 197105598
GI number: 197105598
Start: 2402699
End: 2404432
Strand: Direct
Name: ilvB [H]
Synonym: PHZ_c2135
Alternate gene names: 197105598
Gene position: 2402699-2404432 (Clockwise)
Preceding gene: 197105595
Following gene: 197105599
Centisome position: 60.12
GC content: 73.47
Gene sequence:
>1734_bases ATGACCAAAAAGCGCGCAGCGGGCGAGTTGGCGGCCGCCGCCCTGGCGGGCCTCGGCGTCACGGAGGTGTTCGCGCTGCA CGGCAGCCACCTCGATCCCCTGTTCATGGCCTGCGAGGAGTTCGGCATCCGGCTGACCGACACCCGCCACGAGGCGTCGG CGGGCCACGCGGCCGACGCCTACGCCCGCGCCTCCAACGGCAAGCTCGGCGTCTGCGCCGTCACGGCCGGGCCGGGCTTC ACCAACGCCCTGACGGCGATGGCCAACGCGCACCTCGACCGGATCCCCACGCTGTTCATCGCCGGCGCCGCGCCGCTCCG GGAAGCGGAGGCCAACACCCTGCAGGGCGGCTTCGACGCCGTCGCCATGGCCCGGCCCGTCACCAAGTGGGCGCAGCGGG TCAGCGAGCCCGACCGCATCGTCGAGTTCATCCGCCGGGCGGGCGAGATCGCCCTCAGCGGCGCACCCGGGCCGGTGTTC CTCGAAATCCCCATCGACGTGATGTTCTGGCCGATCGACCAGGCGCCGCCGGACGTCTCCACCTGGAAGCGGCCGCCGCG CCCGGCGCCGGCCCCGGACGTCGTCGAGGCCGTGGTCGAGATGTTCCGCAAGGCCGAGCGGCCGGTGATCATCGCCGGCG GCGGAGCGGTCCTGACCAACTCCGGCGAGCGCCTGCGGCGGCTGGCCGAACTGGTCGGCGCGCCGGTGATCGCCAGCCAG AAGGCGCTGGGCGCCCTCCCCGACGACCACCCCTACTACGCCGGCGCCGCCGCAGGCCTGGCCGCGGCGGCCGCCTCGGG CGAGCCGGCCGACGCCGTGCTCCTCGTGGGCGCCCGGATGGGCATGTTCCTCGGCGGGGCCATGGGCGCGATCATCCCCG AGGGCGCCTATGTCGCCCAGATCGAGTCGAACCCGGAGGAGATCGGCCGGGTGCGCATGGCCGACCTGCCCATCGTGGCG GACGCGGGGGCGACCCTGGACGCCCTGATCCAGCGGGCGGGCGGCGAGGACTGGCCCAAGCGGGAGGCCTGGGCGGCCAA ACTGCGCAGCTTCCGCGGCAATGTCCGCAAGGCTTTCGCCGACGCGCCGGTCAATTCCCGGCCGGGCGCCATCCATCCCG GCCACGCGGTGGCGGCGATCATGGACGCCCTGCCCGAGGGGACCACCGTGGTGGCCGACGGCGGCGAGGCGGGCAACTGG GTGGGCGACCTGGTGCGCTCGCCGGGCGCCGGCCGGTTCCTGCGCTGCGGCTATCTCGGCTGCCTGGGCATCTCGCCGGG CTTCGCGATCGGGGCGGCCCGGGCCACCCCCGGCCAGCCCGTGGTCTGCTTCGCCGGCGACGGCGGGGCGGGTTTCCACA TCCAGGAACTCGACACCATGGTGCGGCACAAGCTGCCGATCGTCACGGTGATCCTGAACAACGCCGAATGGGGCATGTCG CGGAACGCCCAGAACCTCCTCTACGGCAAGAACCGGGAGGTGATCGTGGCCTTGCAGGACACCCGCTATGAGGACGTGGC TCGCGGCTTCGGCGTCGAGGCGGTGCGCATCGACCGCTACGAGGACCTCGAGCCGGCGGTGAAGGCCGCCTTCGCCGCGG GCGAGCCCCGCTGCCTGAACGTCATCATCGACGCCGGCGTCATGCATCCGCGGACCCGGATGATGGTGGGCGACGTCAGC GGCGCGGACGGGGTTCCGATCCCCTACTACGCCAACATCCCGACGGGCCGGTGA
Upstream 100 bases:
>100_bases CGAGGATATTGGATGCAGATTTTGCACCCTGCATCCGCGCGAGCCATCCGCCGGACAGCCTAAGCCGGCGAACCGAGTCT AAGAACAGTTTGGGGGAAAC
Downstream 100 bases:
>100_bases GCGAGCCCTGGCCCGGGGCCGCGGCGGCGCTGGCGGCCGCGGAGCGGCTGTTCTGGACGGTGGAGCACGGCGACCTGGAG GCGCTGCGCGACATCTTCGC
Product: acetolactate synthase, large subunit
Products: NA
Alternate protein names: Benzoin aldolase; BL; BZL [H]
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MTKKRAAGELAAAALAGLGVTEVFALHGSHLDPLFMACEEFGIRLTDTRHEASAGHAADAYARASNGKLGVCAVTAGPGF TNALTAMANAHLDRIPTLFIAGAAPLREAEANTLQGGFDAVAMARPVTKWAQRVSEPDRIVEFIRRAGEIALSGAPGPVF LEIPIDVMFWPIDQAPPDVSTWKRPPRPAPAPDVVEAVVEMFRKAERPVIIAGGGAVLTNSGERLRRLAELVGAPVIASQ KALGALPDDHPYYAGAAAGLAAAAASGEPADAVLLVGARMGMFLGGAMGAIIPEGAYVAQIESNPEEIGRVRMADLPIVA DAGATLDALIQRAGGEDWPKREAWAAKLRSFRGNVRKAFADAPVNSRPGAIHPGHAVAAIMDALPEGTTVVADGGEAGNW VGDLVRSPGAGRFLRCGYLGCLGISPGFAIGAARATPGQPVVCFAGDGGAGFHIQELDTMVRHKLPIVTVILNNAEWGMS RNAQNLLYGKNREVIVALQDTRYEDVARGFGVEAVRIDRYEDLEPAVKAAFAAGEPRCLNVIIDAGVMHPRTRMMVGDVS GADGVPIPYYANIPTGR
Sequences:
>Translated_577_residues MTKKRAAGELAAAALAGLGVTEVFALHGSHLDPLFMACEEFGIRLTDTRHEASAGHAADAYARASNGKLGVCAVTAGPGF TNALTAMANAHLDRIPTLFIAGAAPLREAEANTLQGGFDAVAMARPVTKWAQRVSEPDRIVEFIRRAGEIALSGAPGPVF LEIPIDVMFWPIDQAPPDVSTWKRPPRPAPAPDVVEAVVEMFRKAERPVIIAGGGAVLTNSGERLRRLAELVGAPVIASQ KALGALPDDHPYYAGAAAGLAAAAASGEPADAVLLVGARMGMFLGGAMGAIIPEGAYVAQIESNPEEIGRVRMADLPIVA DAGATLDALIQRAGGEDWPKREAWAAKLRSFRGNVRKAFADAPVNSRPGAIHPGHAVAAIMDALPEGTTVVADGGEAGNW VGDLVRSPGAGRFLRCGYLGCLGISPGFAIGAARATPGQPVVCFAGDGGAGFHIQELDTMVRHKLPIVTVILNNAEWGMS RNAQNLLYGKNREVIVALQDTRYEDVARGFGVEAVRIDRYEDLEPAVKAAFAAGEPRCLNVIIDAGVMHPRTRMMVGDVS GADGVPIPYYANIPTGR >Mature_576_residues TKKRAAGELAAAALAGLGVTEVFALHGSHLDPLFMACEEFGIRLTDTRHEASAGHAADAYARASNGKLGVCAVTAGPGFT NALTAMANAHLDRIPTLFIAGAAPLREAEANTLQGGFDAVAMARPVTKWAQRVSEPDRIVEFIRRAGEIALSGAPGPVFL EIPIDVMFWPIDQAPPDVSTWKRPPRPAPAPDVVEAVVEMFRKAERPVIIAGGGAVLTNSGERLRRLAELVGAPVIASQK ALGALPDDHPYYAGAAAGLAAAAASGEPADAVLLVGARMGMFLGGAMGAIIPEGAYVAQIESNPEEIGRVRMADLPIVAD AGATLDALIQRAGGEDWPKREAWAAKLRSFRGNVRKAFADAPVNSRPGAIHPGHAVAAIMDALPEGTTVVADGGEAGNWV GDLVRSPGAGRFLRCGYLGCLGISPGFAIGAARATPGQPVVCFAGDGGAGFHIQELDTMVRHKLPIVTVILNNAEWGMSR NAQNLLYGKNREVIVALQDTRYEDVARGFGVEAVRIDRYEDLEPAVKAAFAAGEPRCLNVIIDAGVMHPRTRMMVGDVSG ADGVPIPYYANIPTGR
Specific function: Cleavage of benzoin-anisoin acyloin linkage [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=585, Percent_Identity=30.9401709401709, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI93004078, Length=558, Percent_Identity=24.910394265233, Blast_Score=178, Evalue=1e-44, Organism=Escherichia coli, GI1786717, Length=555, Percent_Identity=31.8918918918919, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI87081685, Length=539, Percent_Identity=27.4582560296846, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI1788716, Length=513, Percent_Identity=29.8245614035088, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1790104, Length=551, Percent_Identity=29.2196007259528, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1787096, Length=546, Percent_Identity=25.2747252747253, Blast_Score=138, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17542570, Length=559, Percent_Identity=30.7692307692308, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17531299, Length=558, Percent_Identity=26.7025089605735, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17531301, Length=558, Percent_Identity=26.7025089605735, Blast_Score=156, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323755, Length=568, Percent_Identity=26.9366197183099, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6320816, Length=574, Percent_Identity=25.7839721254355, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321524, Length=509, Percent_Identity=22.5933202357564, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323163, Length=518, Percent_Identity=24.5173745173745, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19922626, Length=579, Percent_Identity=27.979274611399, Blast_Score=184, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =4.1.2.38 [H]
Molecular weight: Translated: 60329; Mature: 60198
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00187 TPP_ENZYMES ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKRAAGELAAAALAGLGVTEVFALHGSHLDPLFMACEEFGIRLTDTRHEASAGHAADA CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCHHH YARASNGKLGVCAVTAGPGFTNALTAMANAHLDRIPTLFIAGAAPLREAEANTLQGGFDA HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCHHH VAMARPVTKWAQRVSEPDRIVEFIRRAGEIALSGAPGPVFLEIPIDVMFWPIDQAPPDVS HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEECCCCCCCHH TWKRPPRPAPAPDVVEAVVEMFRKAERPVIIAGGGAVLTNSGERLRRLAELVGAPVIASQ HCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHHCCCCEECC KALGALPDDHPYYAGAAAGLAAAAASGEPADAVLLVGARMGMFLGGAMGAIIPEGAYVAQ HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEE IESNPEEIGRVRMADLPIVADAGATLDALIQRAGGEDWPKREAWAAKLRSFRGNVRKAFA ECCCHHHHCCEEECCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DAPVNSRPGAIHPGHAVAAIMDALPEGTTVVADGGEAGNWVGDLVRSPGAGRFLRCGYLG CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCCCCEEEECEEE CLGISPGFAIGAARATPGQPVVCFAGDGGAGFHIQELDTMVRHKLPIVTVILNNAEWGMS EECCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC RNAQNLLYGKNREVIVALQDTRYEDVARGFGVEAVRIDRYEDLEPAVKAAFAAGEPRCLN CCCCHHEECCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEE VIIDAGVMHPRTRMMVGDVSGADGVPIPYYANIPTGR EEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCC >Mature Secondary Structure TKKRAAGELAAAALAGLGVTEVFALHGSHLDPLFMACEEFGIRLTDTRHEASAGHAADA CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCHHH YARASNGKLGVCAVTAGPGFTNALTAMANAHLDRIPTLFIAGAAPLREAEANTLQGGFDA HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCHHH VAMARPVTKWAQRVSEPDRIVEFIRRAGEIALSGAPGPVFLEIPIDVMFWPIDQAPPDVS HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEECCCCCCCHH TWKRPPRPAPAPDVVEAVVEMFRKAERPVIIAGGGAVLTNSGERLRRLAELVGAPVIASQ HCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHHCCCCEECC KALGALPDDHPYYAGAAAGLAAAAASGEPADAVLLVGARMGMFLGGAMGAIIPEGAYVAQ HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEE IESNPEEIGRVRMADLPIVADAGATLDALIQRAGGEDWPKREAWAAKLRSFRGNVRKAFA ECCCHHHHCCEEECCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DAPVNSRPGAIHPGHAVAAIMDALPEGTTVVADGGEAGNWVGDLVRSPGAGRFLRCGYLG CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCCCCEEEECEEE CLGISPGFAIGAARATPGQPVVCFAGDGGAGFHIQELDTMVRHKLPIVTVILNNAEWGMS EECCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC RNAQNLLYGKNREVIVALQDTRYEDVARGFGVEAVRIDRYEDLEPAVKAAFAAGEPRCLN CCCCHHEECCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEE VIIDAGVMHPRTRMMVGDVSGADGVPIPYYANIPTGR EEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8026749 [H]