| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105585
Identifier: 197105585
GI number: 197105585
Start: 2387978
End: 2389030
Strand: Direct
Name: 197105585
Synonym: PHZ_c2122
Alternate gene names: NA
Gene position: 2387978-2389030 (Clockwise)
Preceding gene: 197105584
Following gene: 197105586
Centisome position: 59.76
GC content: 72.55
Gene sequence:
>1053_bases ATGCCCTCGGAGACCGAGGCCCTGCCCCGCGCCGACGACGTCGACGCCACAGCGCTCGGACGCTGGATGCAAGGCTCCGT CGAGGGCTTCGCCGGACCGCTAGAGGTCCGCCGTTTCGCCGGCGGCCAGTCCAACCCCACCTATCAGCTCGTCACGCCCG ACCGCCGGTACGTGCTGCGGCGCAAGCCGCCCGGCGCCCTGCTGGCCTCGGCCCACGCGGTCGATCGCGAGTTCCGGGTG ATGCACGCCCTGGGCCGCGCCGGCTACCCCGTCCCGCGGACCTACGCCCTGTGCGAGGACGAGGCCGTCATCGGCTCGAT GTTCTACGTCATGGAGATGGTCGAGGGCCGCATCCTCTGGGACGGGCGCCTGCCCGACCATGCGCCCGAGGAAAGGGCCG GAATCTACGAGGCGCAGATCGAGGCGTTGGCCGCCCTGCACAGGCTGGAGCCGCAGGCCGTGGGGCTGGCGGACTTCGGC CGGCCCGGCAACTACTTCGGCCGCCAGGTCGCCCGCTGGACCCGGCAGTACCGCGCCTCGGCCGGGCCGGACTATCCCGA GATGGAACGGTTGATCGAGTGGCTGCCGCAGAGCCTGCCGCCCGAGCGGCCCGCCCGCGTGGTCCACGGCGACTTCCGCC TCGACAACATGGTCCTGCATCCCGACGAGCCGCGGGTCGTCGCGGTTCTGGACTGGGAGCTCTCGACCCTGGGCGATCCG ATCGCCGACCTGACCTACTTCCTCATGCACTGGGTGACGCCGGCGCATGAGCGCAATTCGCTGAACGGCCTAGACCTGCC GGCGCTGGGCATCCCCACCCTGGAGCAGGCGCTGGAGCGCTACCTGGAGCTCACCGGCGACCGGATGGCGGTCTCGCTGG ACTGGTGCCTGGCCTACAACCTCTTCCGCCTCGCGGCGATCCTGCAGGGCGTGGCGGGACGGGCCCGCGCCGGCGCCGCC AACAACGCCCGCGCCTTCCAGGCCCAGGACCGCGTCGGCCCGCTGGCGACCGCCGCCTGGAGCTTCGCACGCCGCGCCGG AGCCGCAGCATGA
Upstream 100 bases:
>100_bases GTCGCCCCATCTCCGTGAAGAGACCCTCGGAACGGATTGCATACTTGAATGCAATCTTGAGTCCCAGCTAAGCTGGCGCC GACAACAAGGAAGGACGCCC
Downstream 100 bases:
>100_bases GCTGGCCGGCCGCAAGCATCGCCGAGACCCTGGCCCGGCTCACCGCGCCGGGCATGCCGTTCGAGACCGCGCCGGTGGAG GTCCATGGCCGGACGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPSETEALPRADDVDATALGRWMQGSVEGFAGPLEVRRFAGGQSNPTYQLVTPDRRYVLRRKPPGALLASAHAVDREFRV MHALGRAGYPVPRTYALCEDEAVIGSMFYVMEMVEGRILWDGRLPDHAPEERAGIYEAQIEALAALHRLEPQAVGLADFG RPGNYFGRQVARWTRQYRASAGPDYPEMERLIEWLPQSLPPERPARVVHGDFRLDNMVLHPDEPRVVAVLDWELSTLGDP IADLTYFLMHWVTPAHERNSLNGLDLPALGIPTLEQALERYLELTGDRMAVSLDWCLAYNLFRLAAILQGVAGRARAGAA NNARAFQAQDRVGPLATAAWSFARRAGAAA
Sequences:
>Translated_350_residues MPSETEALPRADDVDATALGRWMQGSVEGFAGPLEVRRFAGGQSNPTYQLVTPDRRYVLRRKPPGALLASAHAVDREFRV MHALGRAGYPVPRTYALCEDEAVIGSMFYVMEMVEGRILWDGRLPDHAPEERAGIYEAQIEALAALHRLEPQAVGLADFG RPGNYFGRQVARWTRQYRASAGPDYPEMERLIEWLPQSLPPERPARVVHGDFRLDNMVLHPDEPRVVAVLDWELSTLGDP IADLTYFLMHWVTPAHERNSLNGLDLPALGIPTLEQALERYLELTGDRMAVSLDWCLAYNLFRLAAILQGVAGRARAGAA NNARAFQAQDRVGPLATAAWSFARRAGAAA >Mature_349_residues PSETEALPRADDVDATALGRWMQGSVEGFAGPLEVRRFAGGQSNPTYQLVTPDRRYVLRRKPPGALLASAHAVDREFRVM HALGRAGYPVPRTYALCEDEAVIGSMFYVMEMVEGRILWDGRLPDHAPEERAGIYEAQIEALAALHRLEPQAVGLADFGR PGNYFGRQVARWTRQYRASAGPDYPEMERLIEWLPQSLPPERPARVVHGDFRLDNMVLHPDEPRVVAVLDWELSTLGDPI ADLTYFLMHWVTPAHERNSLNGLDLPALGIPTLEQALERYLELTGDRMAVSLDWCLAYNLFRLAAILQGVAGRARAGAAN NARAFQAQDRVGPLATAAWSFARRAGAAA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=319, Percent_Identity=48.58934169279, Blast_Score=298, Evalue=7e-81, Organism=Homo sapiens, GI211971008, Length=319, Percent_Identity=48.58934169279, Blast_Score=297, Evalue=8e-81, Organism=Homo sapiens, GI38505218, Length=347, Percent_Identity=40.0576368876081, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17562446, Length=323, Percent_Identity=39.0092879256966, Blast_Score=229, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38820; Mature: 38688
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSETEALPRADDVDATALGRWMQGSVEGFAGPLEVRRFAGGQSNPTYQLVTPDRRYVLR CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHCCCCCCCCEEEECCCHHEEEE RKPPGALLASAHAVDREFRVMHALGRAGYPVPRTYALCEDEAVIGSMFYVMEMVEGRILW CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCEEEE DGRLPDHAPEERAGIYEAQIEALAALHRLEPQAVGLADFGRPGNYFGRQVARWTRQYRAS CCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHC AGPDYPEMERLIEWLPQSLPPERPARVVHGDFRLDNMVLHPDEPRVVAVLDWELSTLGDP CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECCEEECCCCCCEEEEEECCHHHHCCH IADLTYFLMHWVTPAHERNSLNGLDLPALGIPTLEQALERYLELTGDRMAVSLDWCLAYN HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHH LFRLAAILQGVAGRARAGAANNARAFQAQDRVGPLATAAWSFARRAGAAA HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSETEALPRADDVDATALGRWMQGSVEGFAGPLEVRRFAGGQSNPTYQLVTPDRRYVLR CCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHCCCCCCCCEEEECCCHHEEEE RKPPGALLASAHAVDREFRVMHALGRAGYPVPRTYALCEDEAVIGSMFYVMEMVEGRILW CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCEEEE DGRLPDHAPEERAGIYEAQIEALAALHRLEPQAVGLADFGRPGNYFGRQVARWTRQYRAS CCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHC AGPDYPEMERLIEWLPQSLPPERPARVVHGDFRLDNMVLHPDEPRVVAVLDWELSTLGDP CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECCEEECCCCCCEEEEEECCHHHHCCH IADLTYFLMHWVTPAHERNSLNGLDLPALGIPTLEQALERYLELTGDRMAVSLDWCLAYN HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHH LFRLAAILQGVAGRARAGAANNARAFQAQDRVGPLATAAWSFARRAGAAA HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA