BacMap

Definition	Phenylobacterium zucineum HLK1, complete genome.
Accession	NC_011144
Length	3,996,255

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The map label for this gene is gabD [H]

Identifier: 197105580

GI number: 197105580

Start: 2382180

End: 2383712

Strand: Direct

Name: gabD [H]

Synonym: PHZ_c2117

Alternate gene names: 197105580

Gene position: 2382180-2383712 (Clockwise)

Preceding gene: 197105578

Following gene: 197105584

Centisome position: 59.61

GC content: 73.58

Gene sequence:

>1533_bases
GTGCGTCCCACCTTTTCCGCCGCGCCGGCCGAGCCGGCCGCGACTCAGGCCGTTCGCATCCTGCAGAGCTGGGGGCTCGA
CGGCCTCGATACGGGCGACCTTGAGGTCCGGAGCCCGATCGACGGGACGCGCCTGGCGCGCCTGGCCTGCGACAGCCCCG
AGGACATCGACGCCAAGGTGGGCCGCGCGCAGGCGGCGTTCGAGACCTGGCGGCAGACTCCGGCCCCGGTGCGGGGCGCC
TTCGTCCGCGAGCTGGCCGAGGTGCTGCGCGAGCTGAAGTCCGAGCTCGCCGCCCTGGTCACCCTCGAATGCGGCAAGAT
CCGCAGCGAGGCCGAGGGCGAGGTGCAGGAGATGATCGACATCTGCGACTTCGCCGTCGGGCTGTCGCGGCAGCTCCACG
GCCTGACGATCGCGTCCGAGCGCCCGCAGCACAAGATGTTCGAGACCTGGCACCCGATCGGCCCGGTGGGGGTCATCTCG
GCCTTCAACTTCCCGGTCGCCGTGTGGTCCTGGAACGCCGCCCTGGCGCTCGTGTGCGGCGACAGCATCGTCTGGAAGCC
GTCGGAGAAGACGCCGCTGACCGCCCTGGCCTGCGCCCGCGCCTTCGCCGAGGCGGCGCGCCGGTTCGGCCGCGCCCCCG
AAGGCCTGCTGGAGGTCGTGATCGGCCGCGCCGAGGCCGGCGCCCAGCTCGCCGCCGACCGGCGCCTGCCGCTGATCAGC
GCCACCGGCAGCACCGCCATGGGCCGCAAGGTGGCGCAGGCCGTCGGCGCCCGGCTCGGCCGCAGCCTGCTGGAACTGGG
CGGCAACAACGCCATCGTCCTGACGCCCAGCGCCGACCTCGACCTCGCCGTCCAGGCCATCGCCTTCGGCGCCATCGGCA
CGGCCGGCCAGCGCTGCACCACGACCCGCCGCCTGTTCGTGCACGAGACCGTCTACGACGAGACCCTGGCCCGGCTGGAG
GCGGCCTACGGCCGGGCGCCGGTCGGCGACCCCTTCGAGGCGCAGACCCTGGTCGGGCCCCTGATCGACCGGCAGGCGTT
CGAGGGCATGCAGGCGGCCCTGGCCAAGGCGGCCCAGGACGGCGGGCGCGTCGTCGGCGGCGAGCGGGTGCGGGAGGACC
TGGGGGCCGAGGCCTACTACGTGCGGCCGGCGCTGGTGGCGCACTCGGGCGCGGAGAACGTCTTCGAGGAGACCTTCGCC
CCGATCCTGCACGTGTTCCGCTATCGCGACCTGGAGGACGCCATCCGCCGCAACAACGACGCGCCCCAGGGACTCTCGTC
GGCGATCTTCACCACCGACCTGCGCGAGGCCGAGCTGTTCACCTCTGCGACGGGCAGCGACTGCGGCATCGCCAACGTCA
ACATCGGCACCAGCGGGGCCGAGATCGGCGGGGCGTTCGGGGGCGAGAAGGACACCGGCGGCGGGCGCGAGAGCGGCAGC
GACGCCTGGAAGGCCTACATGCGGCGCCAGACCCAGACGACCAACTACGGACGGACGCTGCCGCTGGCGCAGGGCGTGCG
GTTCGAGCTCTAG

Upstream 100 bases:

>100_bases
GCGCGCGCCGCCAATCTGCCAATCGCAATGGCAGATTGGCGGCCACTCTGCAAACAGCACCCAAAAAAGTGTCAAATTTC
GAGTTGGAGATTCCATGAGC

Downstream 100 bases:

>100_bases
GCCGTCCGCGCCTCCCGGCCCGCGTCGCGATCAGCCGCGTGGGCCGGGCGCCTCGCTCAGAGCGCCCGCGCCAGGGAGGT
GAAGTCGCGCGGATCCTGCA

Product: NAD-dependent aldehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MRPTFSAAPAEPAATQAVRILQSWGLDGLDTGDLEVRSPIDGTRLARLACDSPEDIDAKVGRAQAAFETWRQTPAPVRGA
FVRELAEVLRELKSELAALVTLECGKIRSEAEGEVQEMIDICDFAVGLSRQLHGLTIASERPQHKMFETWHPIGPVGVIS
AFNFPVAVWSWNAALALVCGDSIVWKPSEKTPLTALACARAFAEAARRFGRAPEGLLEVVIGRAEAGAQLAADRRLPLIS
ATGSTAMGRKVAQAVGARLGRSLLELGGNNAIVLTPSADLDLAVQAIAFGAIGTAGQRCTTTRRLFVHETVYDETLARLE
AAYGRAPVGDPFEAQTLVGPLIDRQAFEGMQAALAKAAQDGGRVVGGERVREDLGAEAYYVRPALVAHSGAENVFEETFA
PILHVFRYRDLEDAIRRNNDAPQGLSSAIFTTDLREAELFTSATGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGS
DAWKAYMRRQTQTTNYGRTLPLAQGVRFEL

Sequences:

>Translated_510_residues
MRPTFSAAPAEPAATQAVRILQSWGLDGLDTGDLEVRSPIDGTRLARLACDSPEDIDAKVGRAQAAFETWRQTPAPVRGA
FVRELAEVLRELKSELAALVTLECGKIRSEAEGEVQEMIDICDFAVGLSRQLHGLTIASERPQHKMFETWHPIGPVGVIS
AFNFPVAVWSWNAALALVCGDSIVWKPSEKTPLTALACARAFAEAARRFGRAPEGLLEVVIGRAEAGAQLAADRRLPLIS
ATGSTAMGRKVAQAVGARLGRSLLELGGNNAIVLTPSADLDLAVQAIAFGAIGTAGQRCTTTRRLFVHETVYDETLARLE
AAYGRAPVGDPFEAQTLVGPLIDRQAFEGMQAALAKAAQDGGRVVGGERVREDLGAEAYYVRPALVAHSGAENVFEETFA
PILHVFRYRDLEDAIRRNNDAPQGLSSAIFTTDLREAELFTSATGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGS
DAWKAYMRRQTQTTNYGRTLPLAQGVRFEL
>Mature_510_residues
MRPTFSAAPAEPAATQAVRILQSWGLDGLDTGDLEVRSPIDGTRLARLACDSPEDIDAKVGRAQAAFETWRQTPAPVRGA
FVRELAEVLRELKSELAALVTLECGKIRSEAEGEVQEMIDICDFAVGLSRQLHGLTIASERPQHKMFETWHPIGPVGVIS
AFNFPVAVWSWNAALALVCGDSIVWKPSEKTPLTALACARAFAEAARRFGRAPEGLLEVVIGRAEAGAQLAADRRLPLIS
ATGSTAMGRKVAQAVGARLGRSLLELGGNNAIVLTPSADLDLAVQAIAFGAIGTAGQRCTTTRRLFVHETVYDETLARLE
AAYGRAPVGDPFEAQTLVGPLIDRQAFEGMQAALAKAAQDGGRVVGGERVREDLGAEAYYVRPALVAHSGAENVFEETFA
PILHVFRYRDLEDAIRRNNDAPQGLSSAIFTTDLREAELFTSATGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGS
DAWKAYMRRQTQTTNYGRTLPLAQGVRFEL

Specific function: Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI188035924, Length=473, Percent_Identity=48.8372093023256, Blast_Score=451, Evalue=1e-127,
Organism=Homo sapiens, GI310128103, Length=455, Percent_Identity=48.5714285714286, Blast_Score=426, Evalue=1e-119,
Organism=Homo sapiens, GI310128093, Length=450, Percent_Identity=48, Blast_Score=417, Evalue=1e-116,
Organism=Homo sapiens, GI310128091, Length=416, Percent_Identity=48.7980769230769, Blast_Score=385, Evalue=1e-107,
Organism=Homo sapiens, GI310128089, Length=306, Percent_Identity=49.0196078431373, Blast_Score=277, Evalue=2e-74,
Organism=Homo sapiens, GI310128095, Length=312, Percent_Identity=46.474358974359, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI310128097, Length=259, Percent_Identity=53.2818532818533, Blast_Score=262, Evalue=7e-70,
Organism=Homo sapiens, GI310128087, Length=269, Percent_Identity=46.0966542750929, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI153266822, Length=460, Percent_Identity=33.2608695652174, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI25777730, Length=477, Percent_Identity=31.4465408805031, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI25777732, Length=470, Percent_Identity=31.9148936170213, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI25777724, Length=467, Percent_Identity=30.1927194860814, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI21361176, Length=489, Percent_Identity=30.0613496932515, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI115387104, Length=466, Percent_Identity=29.3991416309013, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI25777728, Length=422, Percent_Identity=30.3317535545024, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI310128099, Length=222, Percent_Identity=41.8918918918919, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI310128101, Length=221, Percent_Identity=41.6289592760181, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI25777726, Length=466, Percent_Identity=27.4678111587983, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI238814322, Length=484, Percent_Identity=26.8595041322314, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI21614513, Length=476, Percent_Identity=28.1512605042017, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI12007648, Length=506, Percent_Identity=25.6916996047431, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI4507229, Length=469, Percent_Identity=28.7846481876333, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI11095441, Length=477, Percent_Identity=24.7379454926625, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI25777721, Length=467, Percent_Identity=28.6937901498929, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI301500698, Length=282, Percent_Identity=26.5957446808511, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI25952152, Length=504, Percent_Identity=23.2142857142857, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI25777736, Length=468, Percent_Identity=25.4273504273504, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI25777734, Length=468, Percent_Identity=25.4273504273504, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI238859541, Length=468, Percent_Identity=25.4273504273504, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI206597441, Length=458, Percent_Identity=21.3973799126638, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI206597439, Length=458, Percent_Identity=21.3973799126638, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI22907049, Length=458, Percent_Identity=21.3973799126638, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI223972651, Length=463, Percent_Identity=25.7019438444924, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4502043, Length=438, Percent_Identity=26.4840182648402, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI238814371, Length=438, Percent_Identity=26.4840182648402, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI71773324, Length=346, Percent_Identity=26.3005780346821, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI73695881, Length=343, Percent_Identity=25.9475218658892, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI73695879, Length=343, Percent_Identity=25.9475218658892, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4557303, Length=447, Percent_Identity=21.2527964205817, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI73466520, Length=447, Percent_Identity=21.2527964205817, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1789015, Length=475, Percent_Identity=31.1578947368421, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1787684, Length=462, Percent_Identity=31.8181818181818, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1786504, Length=469, Percent_Identity=32.1961620469083, Blast_Score=185, Evalue=6e-48,
Organism=Escherichia coli, GI87081896, Length=475, Percent_Identity=29.8947368421053, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1787715, Length=448, Percent_Identity=30.1339285714286, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787250, Length=442, Percent_Identity=30.0904977375566, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI1788042, Length=455, Percent_Identity=32.3076923076923, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI87081926, Length=461, Percent_Identity=27.9826464208243, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1787558, Length=467, Percent_Identity=28.6937901498929, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI87082295, Length=472, Percent_Identity=26.6949152542373, Blast_Score=140, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI115534176, Length=476, Percent_Identity=49.3697478991597, Blast_Score=469, Evalue=1e-132,
Organism=Caenorhabditis elegans, GI133930964, Length=460, Percent_Identity=32.3913043478261, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17562198, Length=468, Percent_Identity=30.1282051282051, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17534119, Length=462, Percent_Identity=32.4675324675325, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI25144435, Length=468, Percent_Identity=29.0598290598291, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25143876, Length=468, Percent_Identity=26.4957264957265, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI25143874, Length=468, Percent_Identity=26.4957264957265, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17551164, Length=477, Percent_Identity=28.7211740041929, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI32564736, Length=421, Percent_Identity=28.978622327791, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI71995606, Length=477, Percent_Identity=28.3018867924528, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71995613, Length=409, Percent_Identity=28.6063569682152, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71986308, Length=456, Percent_Identity=25.4385964912281, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17534447, Length=458, Percent_Identity=24.8908296943231, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32564151, Length=422, Percent_Identity=25.3554502369668, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI115532534, Length=405, Percent_Identity=25.679012345679, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI32566756, Length=342, Percent_Identity=24.5614035087719, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI25146394, Length=342, Percent_Identity=24.5614035087719, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI25146391, Length=342, Percent_Identity=24.5614035087719, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17564084, Length=350, Percent_Identity=24.2857142857143, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6324950, Length=461, Percent_Identity=28.4164859002169, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320917, Length=463, Percent_Identity=29.1576673866091, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6319478, Length=466, Percent_Identity=28.5407725321888, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6323822, Length=478, Percent_Identity=28.2426778242678, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6323821, Length=473, Percent_Identity=27.906976744186, Blast_Score=177, Evalue=5e-45,
Organism=Saccharomyces cerevisiae, GI6325196, Length=463, Percent_Identity=29.1576673866091, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6323757, Length=322, Percent_Identity=28.5714285714286, Blast_Score=113, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6321828, Length=475, Percent_Identity=22.1052631578947, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6321826, Length=447, Percent_Identity=24.1610738255034, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24666674, Length=478, Percent_Identity=47.6987447698745, Blast_Score=437, Evalue=1e-123,
Organism=Drosophila melanogaster, GI20129399, Length=463, Percent_Identity=32.6133909287257, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=28.9915966386555, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI281362580, Length=461, Percent_Identity=29.2841648590022, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI62472918, Length=461, Percent_Identity=29.2841648590022, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI62472926, Length=461, Percent_Identity=29.2841648590022, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI62472936, Length=461, Percent_Identity=29.2841648590022, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI21356737, Length=461, Percent_Identity=29.2841648590022, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24650465, Length=466, Percent_Identity=30.9012875536481, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24638878, Length=477, Percent_Identity=23.0607966457023, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24638876, Length=477, Percent_Identity=23.0607966457023, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281360303, Length=451, Percent_Identity=23.5033259423503, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360301, Length=451, Percent_Identity=23.9467849223947, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360299, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360297, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360295, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24586250, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45552499, Length=447, Percent_Identity=23.489932885906, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571802, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571800, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571806, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571798, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571796, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571794, Length=345, Percent_Identity=26.3768115942029, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24668425, Length=341, Percent_Identity=23.4604105571848, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24668417, Length=341, Percent_Identity=23.4604105571848, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24668413, Length=341, Percent_Identity=23.4604105571848, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28574525, Length=465, Percent_Identity=24.0860215053763, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281360293, Length=264, Percent_Identity=25.7575757575758, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 54417; Mature: 54417

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTFSAAPAEPAATQAVRILQSWGLDGLDTGDLEVRSPIDGTRLARLACDSPEDIDAKV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHHH
GRAQAAFETWRQTPAPVRGAFVRELAEVLRELKSELAALVTLECGKIRSEAEGEVQEMID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ICDFAVGLSRQLHGLTIASERPQHKMFETWHPIGPVGVISAFNFPVAVWSWNAALALVCG
HHHHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCHHHHHHCCCCEEEEECCCEEEEEEC
DSIVWKPSEKTPLTALACARAFAEAARRFGRAPEGLLEVVIGRAEAGAQLAADRRLPLIS
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEE
ATGSTAMGRKVAQAVGARLGRSLLELGGNNAIVLTPSADLDLAVQAIAFGAIGTAGQRCT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHH
TTRRLFVHETVYDETLARLEAAYGRAPVGDPFEAQTLVGPLIDRQAFEGMQAALAKAAQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRVVGGERVREDLGAEAYYVRPALVAHSGAENVFEETFAPILHVFRYRDLEDAIRRNND
CCEEECHHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
APQGLSSAIFTTDLREAELFTSATGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGS
CCCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCH
DAWKAYMRRQTQTTNYGRTLPLAQGVRFEL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPTFSAAPAEPAATQAVRILQSWGLDGLDTGDLEVRSPIDGTRLARLACDSPEDIDAKV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHHH
GRAQAAFETWRQTPAPVRGAFVRELAEVLRELKSELAALVTLECGKIRSEAEGEVQEMID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ICDFAVGLSRQLHGLTIASERPQHKMFETWHPIGPVGVISAFNFPVAVWSWNAALALVCG
HHHHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCHHHHHHCCCCEEEEECCCEEEEEEC
DSIVWKPSEKTPLTALACARAFAEAARRFGRAPEGLLEVVIGRAEAGAQLAADRRLPLIS
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEE
ATGSTAMGRKVAQAVGARLGRSLLELGGNNAIVLTPSADLDLAVQAIAFGAIGTAGQRCT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHH
TTRRLFVHETVYDETLARLEAAYGRAPVGDPFEAQTLVGPLIDRQAFEGMQAALAKAAQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRVVGGERVREDLGAEAYYVRPALVAHSGAENVFEETFAPILHVFRYRDLEDAIRRNND
CCEEECHHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
APQGLSSAIFTTDLREAELFTSATGSDCGIANVNIGTSGAEIGGAFGGEKDTGGGRESGS
CCCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCH
DAWKAYMRRQTQTTNYGRTLPLAQGVRFEL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]