| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105578
Identifier: 197105578
GI number: 197105578
Start: 2379751
End: 2381526
Strand: Direct
Name: 197105578
Synonym: PHZ_c2115
Alternate gene names: NA
Gene position: 2379751-2381526 (Clockwise)
Preceding gene: 197105574
Following gene: 197105580
Centisome position: 59.55
GC content: 72.13
Gene sequence:
>1776_bases ATGCGACTTTCCATTTTGGCAATCCGGAGCGCCGCAGCGGGCGTGGCCGCCCTGCTGGCGACGACCGCCTGGGCCGAGCC GTCCGCGGACGGCCGGTTCGATTCGCTCGCCCGGGAGCACTGGGAAGCCTTCATCCAGGAGCGGCCGCTGTTCGCCACGG ACGCCGGCGATCCCCGCTACGACGATCGCCTCGAGCGCGTCCGTCCCGAGGACTTCCAGCGCCGCGGCGCCCTGGCGGCC CGCTATCTGGAGCGGCTGCGCGCAATGGATCCCGCCACGCTCGGACCCGAGCGCCGCACGGCGTACCGGGCGCTGGAGCG CGACCTGACGCTGCAGGCCGAGATGGGCTTAAGCCCCGGCGCGCTGCTGCCGCGCCTCTATCCGATCAACTGGCACCAGA CGTTCGTCGAGTACGCGCACCGCGTCCGCCTGCAGACTCCCGAGCAGCACCGGACCTATGTCGGAAGGCTCGAGGCCTTC GCGGTGCAGCTCGACGATTTCCGCGTCCTGCTCGAGGCGGGCCTGCGGCGCGGCTACACCCAGCCGTGTGGCAGCCTCGA CCACTTCTCGGCCGAACTGCGCGCCGCCCGCAGCCGGACGCCCGAGGAGAGCGGCTATTTCACGCCCCTGCGCGCGCCGG CGGACCTGCCCGCCGCGACCGCGGCCGAGCTGCAAGCGGCGGCGGCCGGAACGATCCGGGAGCGGATCCATCCGGCGCTG GATCGCCTGATCGCCTTCGTGGACGGGCCCTACCGCACCCGCTGCCGCACCAGGGTCGGCCTTTCGGAGGTCCCGGGCGG GGCCGCCTGGTATGCGACCCTCGCGCGCCACTACACCACCACCGACACGCCGGTGGCCGAAATCGAGGCCCTGGGCCTGG CCGAGGTCGCGCGCCTGCGCGGCGAGATGGAAGCGGTCATGCGCGAGACCGGCTTCACCGGCGACTTCCAGGCCTTCGCG GCGATGCTGCGCGAGGATCCGCGCTTCTACGCCACGACCGAGGCCGACTACCTGGCCCGCTCGGCGGTCGTGGCCAAGGC GGCGGACGCGGTCCTGCTGCGCTACTTCCACCCGGAGGACCTGCCGCGGCTGCCGTTCGCGATCGAGCCGATCCCGGCCG AGCTCGCGCCGGGCGCCTCGGCGACCAACTTCTACCCGCCGAACGCCGGCGAGCGGAAACCGGGGATCCTCTACCTCAAC ACCTACGACCTGAAGGCGCGGCCGCTCTACGAACTGCCCGGCCTGACGCTGCACAACGCCATGCCGGGCCACCACCTGCA GATCGTCCTGCAGCAGGCCATGGCCGACCTGCCGCCGCAGGTGCGCTACGGCGACATGGTCGCCTACACCGAGGGCTGGT CGCTCTACGCCGAGTGGCTCGGCGGCGAGATGGGCCTCTACTCCGATCCCTACGTGCGGTTCGGCCAGCTCAACATGGAG ATGTGGCGCGCGCTGCGGCTGGTGGTCGATCCGGGCCTGCACCTGCACGGTTGGACCCGCGAGCAGGCGGTGACCTACAT GCTGGAGAACTCGGCCATGTCCCGCCGGGCGATCGAGCACGAGGTCGACCGCTACATCTCCTGGCCGGCGCAGTCGCTGT CCTACCGGCTGGGGGACCTGAAGTTCCGCGAGCTGCGGGCCAGGGCCGAGGCCCGGCTGGGCGAGCGGTTCGACATCCGC GACTTCCACCACGCCGTGCTGGCCACCGGGACGGTCCCGCTGTCGGCCCTCGATGCGGCCGTGGAGGACTGGCTCGCCGC GCAGGAGGCTCCCTAG
Upstream 100 bases:
>100_bases TTGACATATTAGTGACCATCTTTTCCTTTTTGGCAAGCGCCTCCCGCTTGTCAGCCCACTTCTGTGCGGCAGCCGAGGTC GGCGCGGGGGGATTCTGCAG
Downstream 100 bases:
>100_bases CGGGAGCCTCTAGGCGGGCTCCCTCGGAGCAGGCTCCGCCATCAGCCGATCGCCCAGCACCATGTAGGTCTGGGTCCTCT CCACGCCGTCGAGCATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRLSILAIRSAAAGVAALLATTAWAEPSADGRFDSLAREHWEAFIQERPLFATDAGDPRYDDRLERVRPEDFQRRGALAA RYLERLRAMDPATLGPERRTAYRALERDLTLQAEMGLSPGALLPRLYPINWHQTFVEYAHRVRLQTPEQHRTYVGRLEAF AVQLDDFRVLLEAGLRRGYTQPCGSLDHFSAELRAARSRTPEESGYFTPLRAPADLPAATAAELQAAAAGTIRERIHPAL DRLIAFVDGPYRTRCRTRVGLSEVPGGAAWYATLARHYTTTDTPVAEIEALGLAEVARLRGEMEAVMRETGFTGDFQAFA AMLREDPRFYATTEADYLARSAVVAKAADAVLLRYFHPEDLPRLPFAIEPIPAELAPGASATNFYPPNAGERKPGILYLN TYDLKARPLYELPGLTLHNAMPGHHLQIVLQQAMADLPPQVRYGDMVAYTEGWSLYAEWLGGEMGLYSDPYVRFGQLNME MWRALRLVVDPGLHLHGWTREQAVTYMLENSAMSRRAIEHEVDRYISWPAQSLSYRLGDLKFRELRARAEARLGERFDIR DFHHAVLATGTVPLSALDAAVEDWLAAQEAP
Sequences:
>Translated_591_residues MRLSILAIRSAAAGVAALLATTAWAEPSADGRFDSLAREHWEAFIQERPLFATDAGDPRYDDRLERVRPEDFQRRGALAA RYLERLRAMDPATLGPERRTAYRALERDLTLQAEMGLSPGALLPRLYPINWHQTFVEYAHRVRLQTPEQHRTYVGRLEAF AVQLDDFRVLLEAGLRRGYTQPCGSLDHFSAELRAARSRTPEESGYFTPLRAPADLPAATAAELQAAAAGTIRERIHPAL DRLIAFVDGPYRTRCRTRVGLSEVPGGAAWYATLARHYTTTDTPVAEIEALGLAEVARLRGEMEAVMRETGFTGDFQAFA AMLREDPRFYATTEADYLARSAVVAKAADAVLLRYFHPEDLPRLPFAIEPIPAELAPGASATNFYPPNAGERKPGILYLN TYDLKARPLYELPGLTLHNAMPGHHLQIVLQQAMADLPPQVRYGDMVAYTEGWSLYAEWLGGEMGLYSDPYVRFGQLNME MWRALRLVVDPGLHLHGWTREQAVTYMLENSAMSRRAIEHEVDRYISWPAQSLSYRLGDLKFRELRARAEARLGERFDIR DFHHAVLATGTVPLSALDAAVEDWLAAQEAP >Mature_591_residues MRLSILAIRSAAAGVAALLATTAWAEPSADGRFDSLAREHWEAFIQERPLFATDAGDPRYDDRLERVRPEDFQRRGALAA RYLERLRAMDPATLGPERRTAYRALERDLTLQAEMGLSPGALLPRLYPINWHQTFVEYAHRVRLQTPEQHRTYVGRLEAF AVQLDDFRVLLEAGLRRGYTQPCGSLDHFSAELRAARSRTPEESGYFTPLRAPADLPAATAAELQAAAAGTIRERIHPAL DRLIAFVDGPYRTRCRTRVGLSEVPGGAAWYATLARHYTTTDTPVAEIEALGLAEVARLRGEMEAVMRETGFTGDFQAFA AMLREDPRFYATTEADYLARSAVVAKAADAVLLRYFHPEDLPRLPFAIEPIPAELAPGASATNFYPPNAGERKPGILYLN TYDLKARPLYELPGLTLHNAMPGHHLQIVLQQAMADLPPQVRYGDMVAYTEGWSLYAEWLGGEMGLYSDPYVRFGQLNME MWRALRLVVDPGLHLHGWTREQAVTYMLENSAMSRRAIEHEVDRYISWPAQSLSYRLGDLKFRELRARAEARLGERFDIR DFHHAVLATGTVPLSALDAAVEDWLAAQEAP
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66313; Mature: 66313
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSILAIRSAAAGVAALLATTAWAEPSADGRFDSLAREHWEAFIQERPLFATDAGDPRY CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCH DDRLERVRPEDFQRRGALAARYLERLRAMDPATLGPERRTAYRALERDLTLQAEMGLSPG HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC ALLPRLYPINWHQTFVEYAHRVRLQTPEQHRTYVGRLEAFAVQLDDFRVLLEAGLRRGYT CCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPCGSLDHFSAELRAARSRTPEESGYFTPLRAPADLPAATAAELQAAAAGTIRERIHPAL CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DRLIAFVDGPYRTRCRTRVGLSEVPGGAAWYATLARHYTTTDTPVAEIEALGLAEVARLR HHHHHHHCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH GEMEAVMRETGFTGDFQAFAAMLREDPRFYATTEADYLARSAVVAKAADAVLLRYFHPED HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC LPRLPFAIEPIPAELAPGASATNFYPPNAGERKPGILYLNTYDLKARPLYELPGLTLHNA CCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCEEECC MPGHHLQIVLQQAMADLPPQVRYGDMVAYTEGWSLYAEWLGGEMGLYSDPYVRFGQLNME CCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCEECCCCHH MWRALRLVVDPGLHLHGWTREQAVTYMLENSAMSRRAIEHEVDRYISWPAQSLSYRLGDL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH KFRELRARAEARLGERFDIRDFHHAVLATGTVPLSALDAAVEDWLAAQEAP HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLSILAIRSAAAGVAALLATTAWAEPSADGRFDSLAREHWEAFIQERPLFATDAGDPRY CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCH DDRLERVRPEDFQRRGALAARYLERLRAMDPATLGPERRTAYRALERDLTLQAEMGLSPG HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC ALLPRLYPINWHQTFVEYAHRVRLQTPEQHRTYVGRLEAFAVQLDDFRVLLEAGLRRGYT CCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPCGSLDHFSAELRAARSRTPEESGYFTPLRAPADLPAATAAELQAAAAGTIRERIHPAL CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DRLIAFVDGPYRTRCRTRVGLSEVPGGAAWYATLARHYTTTDTPVAEIEALGLAEVARLR HHHHHHHCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH GEMEAVMRETGFTGDFQAFAAMLREDPRFYATTEADYLARSAVVAKAADAVLLRYFHPED HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC LPRLPFAIEPIPAELAPGASATNFYPPNAGERKPGILYLNTYDLKARPLYELPGLTLHNA CCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCEEECC MPGHHLQIVLQQAMADLPPQVRYGDMVAYTEGWSLYAEWLGGEMGLYSDPYVRFGQLNME CCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCEECCCCHH MWRALRLVVDPGLHLHGWTREQAVTYMLENSAMSRRAIEHEVDRYISWPAQSLSYRLGDL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH KFRELRARAEARLGERFDIRDFHHAVLATGTVPLSALDAAVEDWLAAQEAP HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA