| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105573
Identifier: 197105573
GI number: 197105573
Start: 2369776
End: 2371326
Strand: Reverse
Name: 197105573
Synonym: PHZ_c2110
Alternate gene names: NA
Gene position: 2371326-2369776 (Counterclockwise)
Preceding gene: 197105575
Following gene: 197105571
Centisome position: 59.34
GC content: 71.57
Gene sequence:
>1551_bases ATGCCAGCCTGCTACACCGACCGCCTCAGCGTCCGCCCCGGCGAGACGTTCACGCTGCACGCCAGCGCGGCGCGCAGCCC CTGCCGGCTGTCCGTCGCCCGGGTGGGCGCGGCCCGCGCCGAGGTGCTGCGGCTCGAGGGGATCGAGGTGGGCGACCATC CCGTCCCGCCGCACGCCGACCGCGACGGCTGCGGCTGGCCCGCCGCGCTGGAGGTCGAGGTCGGCCGGGACTGGGCGTCC GGCTACTACGACATCGTGCTGACCGACGCCGACGGCGAGGACGCCCACCACTTCGTGTGCGTGAAGCCGCCCGTGGGCGA GCGGCGCGCCACCGCCCTGCTGGTGCTGGCGACCAACACCTACCAGTCCTACAACTACTGGGGCGGCGCGAACGCCTACG CCAACGTCGCCGGACTGATGAGCGGGGAGGTCCCGTTCGCCCAGGCGATGGACCAGGCGATCGGGGTGCTGTCGACGCAG CGGCCGTTTCCGCCCCTGATCGTTGCTCCGCCGGCCGATCCGCCCCGCCTGGTGAACCTGCGCAAGCGCGGCTTCCGCGA AAAGCCGTGGGCCTCGGATCCCGCGTGGATGGCCGCCCATCGCGCTTCGCCCTACGACGGGTCGGCCGGCTTCCTCCACA AGTGGGAGCACGTCTTCGTCGCCTGGGCCGAGGCGGAGGGCTACACGCTGGACTACGCCACCGACTACGATCTGGAGGCC GAGCCCGACCTGCTGTCCGGCTACGCGGCGGTCCTGTTCGTCGGTCACAGCGAGTACTGGTCGGCCGGCCAGCGCGAGCA GGTCGAGCGGTTCGTGGACGCCGGCGGCTACGCCGCGATCTTCTCCGGCAACACCTGCTTCTGGAAGGTCCGGTGGGAGG ACGGCGGGAAGACCTACGTCTGCCACAAGTGGAAGGGCTTCGAGGCCGAAGACGCGCCTCCGGCCGAGGCCACGCACCTG TGGTCGCATCCCGCCTTCGGAAAGCCCGAGGCTGAGATCACCGGCCTCAGCTTCGTGTTCGCCGGCTACCACCGGCTCGG CATGTGCGTATCCCGCGGACAGGGCGGCTTCACCGTCTACGACGACCGGCACTGGGCGCTGGAAGGCACGGACCTCTTCT ACGGGGATCTGCTGGGCGCGGACCTGCCGCTGATCGGCTACGAGAGCGACGGCTGCCGGTTCGAGTTCGGCGACGACGGC CTTCCGCGGGCGATCCCCGCCCTGGGCGTGCCCGCGAACCTGGAGATCATCGGCGTCGCGCCCTGCGCCTTCGGCGAGGA GGCGGGCCGCGGCTACAATCCGATCATTCCCCCCGAGAAGCTGGACGTGATCGCCGACGTCATGTTCGGCGATACGAGCG CGAAGGCCCAGCAGAAGGTGCTGCGCGGGCACGCGGTGCTGGCCAGCTTCAGGCGCGGCAAGGGCGAGGTGTTCAACAGC GGCACGACCGAATGGGCCCACGGCCTCGGCGCCCGCGACCCCTTCGTGGAGGGCGTCACCCACAACGTGCTGCGCCGGTT CGGGGTGAGCCGGCCCGGACGGCCGGCGTGA
Upstream 100 bases:
>100_bases GGCGGTGACGCCCGGGCAGGCGCCGAAAGGTCGAGGCCGATTGAGGGACGGTCTCGGGCGACGGTGACAGCCAAGTTTCA GCGATGTGAGGGAGCCGACA
Downstream 100 bases:
>100_bases GCGGCGAGGACGGCCGCAGGAGGGGCGCGCAAGCCCCTCCCGCCGGACCTAGTGGTCGAGCATCTGGTTCATGAAGCCCA GCTTGGCGGGCGCCTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPACYTDRLSVRPGETFTLHASAARSPCRLSVARVGAARAEVLRLEGIEVGDHPVPPHADRDGCGWPAALEVEVGRDWAS GYYDIVLTDADGEDAHHFVCVKPPVGERRATALLVLATNTYQSYNYWGGANAYANVAGLMSGEVPFAQAMDQAIGVLSTQ RPFPPLIVAPPADPPRLVNLRKRGFREKPWASDPAWMAAHRASPYDGSAGFLHKWEHVFVAWAEAEGYTLDYATDYDLEA EPDLLSGYAAVLFVGHSEYWSAGQREQVERFVDAGGYAAIFSGNTCFWKVRWEDGGKTYVCHKWKGFEAEDAPPAEATHL WSHPAFGKPEAEITGLSFVFAGYHRLGMCVSRGQGGFTVYDDRHWALEGTDLFYGDLLGADLPLIGYESDGCRFEFGDDG LPRAIPALGVPANLEIIGVAPCAFGEEAGRGYNPIIPPEKLDVIADVMFGDTSAKAQQKVLRGHAVLASFRRGKGEVFNS GTTEWAHGLGARDPFVEGVTHNVLRRFGVSRPGRPA
Sequences:
>Translated_516_residues MPACYTDRLSVRPGETFTLHASAARSPCRLSVARVGAARAEVLRLEGIEVGDHPVPPHADRDGCGWPAALEVEVGRDWAS GYYDIVLTDADGEDAHHFVCVKPPVGERRATALLVLATNTYQSYNYWGGANAYANVAGLMSGEVPFAQAMDQAIGVLSTQ RPFPPLIVAPPADPPRLVNLRKRGFREKPWASDPAWMAAHRASPYDGSAGFLHKWEHVFVAWAEAEGYTLDYATDYDLEA EPDLLSGYAAVLFVGHSEYWSAGQREQVERFVDAGGYAAIFSGNTCFWKVRWEDGGKTYVCHKWKGFEAEDAPPAEATHL WSHPAFGKPEAEITGLSFVFAGYHRLGMCVSRGQGGFTVYDDRHWALEGTDLFYGDLLGADLPLIGYESDGCRFEFGDDG LPRAIPALGVPANLEIIGVAPCAFGEEAGRGYNPIIPPEKLDVIADVMFGDTSAKAQQKVLRGHAVLASFRRGKGEVFNS GTTEWAHGLGARDPFVEGVTHNVLRRFGVSRPGRPA >Mature_515_residues PACYTDRLSVRPGETFTLHASAARSPCRLSVARVGAARAEVLRLEGIEVGDHPVPPHADRDGCGWPAALEVEVGRDWASG YYDIVLTDADGEDAHHFVCVKPPVGERRATALLVLATNTYQSYNYWGGANAYANVAGLMSGEVPFAQAMDQAIGVLSTQR PFPPLIVAPPADPPRLVNLRKRGFREKPWASDPAWMAAHRASPYDGSAGFLHKWEHVFVAWAEAEGYTLDYATDYDLEAE PDLLSGYAAVLFVGHSEYWSAGQREQVERFVDAGGYAAIFSGNTCFWKVRWEDGGKTYVCHKWKGFEAEDAPPAEATHLW SHPAFGKPEAEITGLSFVFAGYHRLGMCVSRGQGGFTVYDDRHWALEGTDLFYGDLLGADLPLIGYESDGCRFEFGDDGL PRAIPALGVPANLEIIGVAPCAFGEEAGRGYNPIIPPEKLDVIADVMFGDTSAKAQQKVLRGHAVLASFRRGKGEVFNSG TTEWAHGLGARDPFVEGVTHNVLRRFGVSRPGRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56159; Mature: 56028
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPACYTDRLSVRPGETFTLHASAARSPCRLSVARVGAARAEVLRLEGIEVGDHPVPPHAD CCCCCCCCEECCCCCEEEEEECCCCCCCEEEHHHHCHHHEEEEEEECEECCCCCCCCCCC RDGCGWPAALEVEVGRDWASGYYDIVLTDADGEDAHHFVCVKPPVGERRATALLVLATNT CCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECC YQSYNYWGGANAYANVAGLMSGEVPFAQAMDQAIGVLSTQRPFPPLIVAPPADPPRLVNL CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHH RKRGFREKPWASDPAWMAAHRASPYDGSAGFLHKWEHVFVAWAEAEGYTLDYATDYDLEA HHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHEECEEEEEEEECCCCEEEEEECCCCCCC EPDLLSGYAAVLFVGHSEYWSAGQREQVERFVDAGGYAAIFSGNTCFWKVRWEDGGKTYV CCHHHCCEEEEEEEECHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCEEE CHKWKGFEAEDAPPAEATHLWSHPAFGKPEAEITGLSFVFAGYHRLGMCVSRGQGGFTVY EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECEEHHHHHHHHHHHHEECCCCCEEEE DDRHWALEGTDLFYGDLLGADLPLIGYESDGCRFEFGDDGLPRAIPALGVPANLEIIGVA CCCEEEEECCCEEEHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEC PCAFGEEAGRGYNPIIPPEKLDVIADVMFGDTSAKAQQKVLRGHAVLASFRRGKGEVFNS CCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECC GTTEWAHGLGARDPFVEGVTHNVLRRFGVSRPGRPA CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PACYTDRLSVRPGETFTLHASAARSPCRLSVARVGAARAEVLRLEGIEVGDHPVPPHAD CCCCCCCEECCCCCEEEEEECCCCCCCEEEHHHHCHHHEEEEEEECEECCCCCCCCCCC RDGCGWPAALEVEVGRDWASGYYDIVLTDADGEDAHHFVCVKPPVGERRATALLVLATNT CCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECC YQSYNYWGGANAYANVAGLMSGEVPFAQAMDQAIGVLSTQRPFPPLIVAPPADPPRLVNL CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHH RKRGFREKPWASDPAWMAAHRASPYDGSAGFLHKWEHVFVAWAEAEGYTLDYATDYDLEA HHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHEECEEEEEEEECCCCEEEEEECCCCCCC EPDLLSGYAAVLFVGHSEYWSAGQREQVERFVDAGGYAAIFSGNTCFWKVRWEDGGKTYV CCHHHCCEEEEEEEECHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCEEE CHKWKGFEAEDAPPAEATHLWSHPAFGKPEAEITGLSFVFAGYHRLGMCVSRGQGGFTVY EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECEEHHHHHHHHHHHHEECCCCCEEEE DDRHWALEGTDLFYGDLLGADLPLIGYESDGCRFEFGDDGLPRAIPALGVPANLEIIGVA CCCEEEEECCCEEEHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEC PCAFGEEAGRGYNPIIPPEKLDVIADVMFGDTSAKAQQKVLRGHAVLASFRRGKGEVFNS CCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECC GTTEWAHGLGARDPFVEGVTHNVLRRFGVSRPGRPA CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA