| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105566
Identifier: 197105566
GI number: 197105566
Start: 2360936
End: 2363089
Strand: Direct
Name: 197105566
Synonym: PHZ_c2103
Alternate gene names: NA
Gene position: 2360936-2363089 (Clockwise)
Preceding gene: 197105561
Following gene: 197105567
Centisome position: 59.08
GC content: 75.53
Gene sequence:
>2154_bases ATGGACGAGAGATGGCGCGACCCCGCGCTCGGGCGGCGCATGGCCGACTTCGCGCACCGACGCGCGAGCGCGCTCCTCTC GCCGCCGGAAGCGCGCGCCTTGAGCGACTACCTCCAGCAGCTGGTCCGCGAGGGACGCGCCCCGCCGCCGCGCGGCCGCG GCTTCGACTGGCGCGCCATCGCCGCGGCCACGGCCATCCCGCTCGAGAGCCTGCAGCGGGCCCGCGACGGCCTGCTCCCC GGCCTGCAGGCGCTCCGCCGCGAACTGCGCAAGCCGCCGAGGCTCCGCCCGCCCCGCCCCCCACGGGGACGCCCCTGCGG GCCCATCGAGGACCTGCCCCCCGCCGCCCACGACCCCACGCCCGAGCCGGCGGCCTTCCACCTGTCCCTGGCCCGGCAGA TGCGCCGACACGGCGACACCGTGCACGGCCTGACCCGCTGGCTGCGCGCCAAGGGCCACCCCACGGCCCGAGGCACGCTG AAGGCCTGGCTGCGAGGGACCAAGGCGCCGCGCCACCGCGACAGCCTGGCCGTCCTCGCCCGCCTGGAGACCCGCTGGGG CCTGGCGGCCGGCCATTTCCGCGCCAGGCTGCCCCATCCGGGCCGCGCCGTCGCCGGCCAGAGGCTGGAGGCCGTCCCCG AAAGCGAGCGCCGGCACCTCGCCTGGCACCTGCCCGAGGATTTCGACCGCCGCCCCGCCACCGAGCAGGAGGAGATCCTG GCCTGGGTGCACCGGGTGATCATGCGCGGCGCCACCGACTACCGCCGCTACCAGGCCTTCGCCGTGCGCGCCCGCTACGG CCTGCGGTTCCCCGGGCTCCAGCCGGTCGGCGAGGCCGCCCGCCTCGCCCCGCCTGGCCTTACCGCCGAGGTCGAGGCGC TGGTGGCCTTCAAGACCGCCCGCTTCGCCCCGGTGGGCCTCGCGCGCGAGGGGGTCTGGTCGGCGGCGACCGCCGGCCAG AAGGCGACCCATCTGGGCCTCTTCTTCGGCGCCCTGGCGGCCGCCCCCGAGGGGCCGGCGCGCGGCTACGGCGCCCCGGC CGAGGCCTTCACCCTGGCCATGCTGGTCTTCCCGCGGCTCTGGGACTGGCACCTGGCCTGGCGCGAGGCGCGTCGCGGCT TCTTCACCGCCTGGGAGTACGACATGCTGGCCTTCGCCCGCAGTCTCACGGCCGCCCAGACCGGCTGGCTCACCCAGTCG CCGCAGCTGGCGCAGCGACTTTCCCCCCTCCCCGGCCTGATCGAAGCCTCCGACATCGCCCGGGCGCAGGCGGACTGGGC GCGGGCCTGCGCCGACTTCCATCGCCATGCCGGCGTCCGGCGCCGCGAGATCGACCGCCTGCGGCGCGTCCACAACGATC CCTTCGAGCCGATCGCGCCCGTCCTGGAGGCCCAGAGCCCGCTCGGCGAATACCGCAAGATCGCCGAAGAGGTGGCGCGC CGGCGGCCCTGTCCCCGCCGCTATCCCCTGGCCGCGGCCGAGGCCAGCCGGGCCGTGCTGATGATCCGGCTGGGCCTGCA CCTGGGCTTCCGGCAGCGGAACCTGCGCGAGCTGCTGGTCTGCCGGCGCGGCGCCCGGCCGCGATCGGAACGGGAGCTTG CGGAGCTGCGGCGCGGGGAGCTGCGCTGGAGCGAGAGGGCGGGCGGCTGGGAGGTGTTCGCGCCGTGCCTGGCCTTCAAG AACGCCCGCTCCTCGTTCTTCAGCGGCCGGCCGTATCGCCTGGTCCTGCCGGACGTGGCCGGCCTCTACGACGAGATCGA GGCCTATCTGGCCGAGGCGCGGCCGCGCCTGCTGCGCGGCGCTGACGATCCCGGGACGTTCTTCGTCAAGACGATGAAGT CGCCGAACGGCGCGGCGGCCTACGACGGCACGGCCTTCTACCAGGCCTGGCGATGGATCATCCAGCGGCACGGGGTCTTC AACCCCTGGACGGGCCGCGGCGCGATCGCGGGCCTCCTGCCGCACGGGCCGCACAGCGTGCGCGACGTGCTCGCCGCCCA TGTGCTGAAGCACACCGGCTCCTTCGAGCTTGCGAGCTATGCGATCCAGGACACGCCCGAGACCGTGGCCCGCCACTACG GCCGGTTCCTCCCTCAGGACAAGGCGGAGCTGGCCGGGCGGGTGCTGAACGCCGCCTGGAGCGATGAAGACTGA
Upstream 100 bases:
>100_bases GGCCGCCGCCGGGCCGGTTTGGCGGGCGAATTTCCGGGCGCCGGCCGAGGGGTTTTGGCCCCGATCCGCGTCTCTACCTT GAAGGCCGGGAAGGGCGGAC
Downstream 100 bases:
>100_bases CCGTATCCACCGCATACGTCCCGCAGCTGGCGCGCCTCCCGCCACAAAGGTCGACGGCTCGGCGCCCTGGCGGTCGGGCG CTGGGTCGGCAGGCCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MDERWRDPALGRRMADFAHRRASALLSPPEARALSDYLQQLVREGRAPPPRGRGFDWRAIAAATAIPLESLQRARDGLLP GLQALRRELRKPPRLRPPRPPRGRPCGPIEDLPPAAHDPTPEPAAFHLSLARQMRRHGDTVHGLTRWLRAKGHPTARGTL KAWLRGTKAPRHRDSLAVLARLETRWGLAAGHFRARLPHPGRAVAGQRLEAVPESERRHLAWHLPEDFDRRPATEQEEIL AWVHRVIMRGATDYRRYQAFAVRARYGLRFPGLQPVGEAARLAPPGLTAEVEALVAFKTARFAPVGLAREGVWSAATAGQ KATHLGLFFGALAAAPEGPARGYGAPAEAFTLAMLVFPRLWDWHLAWREARRGFFTAWEYDMLAFARSLTAAQTGWLTQS PQLAQRLSPLPGLIEASDIARAQADWARACADFHRHAGVRRREIDRLRRVHNDPFEPIAPVLEAQSPLGEYRKIAEEVAR RRPCPRRYPLAAAEASRAVLMIRLGLHLGFRQRNLRELLVCRRGARPRSERELAELRRGELRWSERAGGWEVFAPCLAFK NARSSFFSGRPYRLVLPDVAGLYDEIEAYLAEARPRLLRGADDPGTFFVKTMKSPNGAAAYDGTAFYQAWRWIIQRHGVF NPWTGRGAIAGLLPHGPHSVRDVLAAHVLKHTGSFELASYAIQDTPETVARHYGRFLPQDKAELAGRVLNAAWSDED
Sequences:
>Translated_717_residues MDERWRDPALGRRMADFAHRRASALLSPPEARALSDYLQQLVREGRAPPPRGRGFDWRAIAAATAIPLESLQRARDGLLP GLQALRRELRKPPRLRPPRPPRGRPCGPIEDLPPAAHDPTPEPAAFHLSLARQMRRHGDTVHGLTRWLRAKGHPTARGTL KAWLRGTKAPRHRDSLAVLARLETRWGLAAGHFRARLPHPGRAVAGQRLEAVPESERRHLAWHLPEDFDRRPATEQEEIL AWVHRVIMRGATDYRRYQAFAVRARYGLRFPGLQPVGEAARLAPPGLTAEVEALVAFKTARFAPVGLAREGVWSAATAGQ KATHLGLFFGALAAAPEGPARGYGAPAEAFTLAMLVFPRLWDWHLAWREARRGFFTAWEYDMLAFARSLTAAQTGWLTQS PQLAQRLSPLPGLIEASDIARAQADWARACADFHRHAGVRRREIDRLRRVHNDPFEPIAPVLEAQSPLGEYRKIAEEVAR RRPCPRRYPLAAAEASRAVLMIRLGLHLGFRQRNLRELLVCRRGARPRSERELAELRRGELRWSERAGGWEVFAPCLAFK NARSSFFSGRPYRLVLPDVAGLYDEIEAYLAEARPRLLRGADDPGTFFVKTMKSPNGAAAYDGTAFYQAWRWIIQRHGVF NPWTGRGAIAGLLPHGPHSVRDVLAAHVLKHTGSFELASYAIQDTPETVARHYGRFLPQDKAELAGRVLNAAWSDED >Mature_717_residues MDERWRDPALGRRMADFAHRRASALLSPPEARALSDYLQQLVREGRAPPPRGRGFDWRAIAAATAIPLESLQRARDGLLP GLQALRRELRKPPRLRPPRPPRGRPCGPIEDLPPAAHDPTPEPAAFHLSLARQMRRHGDTVHGLTRWLRAKGHPTARGTL KAWLRGTKAPRHRDSLAVLARLETRWGLAAGHFRARLPHPGRAVAGQRLEAVPESERRHLAWHLPEDFDRRPATEQEEIL AWVHRVIMRGATDYRRYQAFAVRARYGLRFPGLQPVGEAARLAPPGLTAEVEALVAFKTARFAPVGLAREGVWSAATAGQ KATHLGLFFGALAAAPEGPARGYGAPAEAFTLAMLVFPRLWDWHLAWREARRGFFTAWEYDMLAFARSLTAAQTGWLTQS PQLAQRLSPLPGLIEASDIARAQADWARACADFHRHAGVRRREIDRLRRVHNDPFEPIAPVLEAQSPLGEYRKIAEEVAR RRPCPRRYPLAAAEASRAVLMIRLGLHLGFRQRNLRELLVCRRGARPRSERELAELRRGELRWSERAGGWEVFAPCLAFK NARSSFFSGRPYRLVLPDVAGLYDEIEAYLAEARPRLLRGADDPGTFFVKTMKSPNGAAAYDGTAFYQAWRWIIQRHGVF NPWTGRGAIAGLLPHGPHSVRDVLAAHVLKHTGSFELASYAIQDTPETVARHYGRFLPQDKAELAGRVLNAAWSDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80453; Mature: 80453
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERWRDPALGRRMADFAHRRASALLSPPEARALSDYLQQLVREGRAPPPRGRGFDWRAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AAATAIPLESLQRARDGLLPGLQALRRELRKPPRLRPPRPPRGRPCGPIEDLPPAAHDPT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPAAFHLSLARQMRRHGDTVHGLTRWLRAKGHPTARGTLKAWLRGTKAPRHRDSLAVLA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH RLETRWGLAAGHFRARLPHPGRAVAGQRLEAVPESERRHLAWHLPEDFDRRPATEQEEIL HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCHHHHH AWVHRVIMRGATDYRRYQAFAVRARYGLRFPGLQPVGEAARLAPPGLTAEVEALVAFKTA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH RFAPVGLAREGVWSAATAGQKATHLGLFFGALAAAPEGPARGYGAPAEAFTLAMLVFPRL CCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH WDWHLAWREARRGFFTAWEYDMLAFARSLTAAQTGWLTQSPQLAQRLSPLPGLIEASDIA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHH RAQADWARACADFHRHAGVRRREIDRLRRVHNDPFEPIAPVLEAQSPLGEYRKIAEEVAR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH RRPCPRRYPLAAAEASRAVLMIRLGLHLGFRQRNLRELLVCRRGARPRSERELAELRRGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC LRWSERAGGWEVFAPCLAFKNARSSFFSGRPYRLVLPDVAGLYDEIEAYLAEARPRLLRG CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC ADDPGTFFVKTMKSPNGAAAYDGTAFYQAWRWIIQRHGVFNPWTGRGAIAGLLPHGPHSV CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH RDVLAAHVLKHTGSFELASYAIQDTPETVARHYGRFLPQDKAELAGRVLNAAWSDED HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDERWRDPALGRRMADFAHRRASALLSPPEARALSDYLQQLVREGRAPPPRGRGFDWRAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AAATAIPLESLQRARDGLLPGLQALRRELRKPPRLRPPRPPRGRPCGPIEDLPPAAHDPT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPAAFHLSLARQMRRHGDTVHGLTRWLRAKGHPTARGTLKAWLRGTKAPRHRDSLAVLA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH RLETRWGLAAGHFRARLPHPGRAVAGQRLEAVPESERRHLAWHLPEDFDRRPATEQEEIL HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCHHHHH AWVHRVIMRGATDYRRYQAFAVRARYGLRFPGLQPVGEAARLAPPGLTAEVEALVAFKTA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH RFAPVGLAREGVWSAATAGQKATHLGLFFGALAAAPEGPARGYGAPAEAFTLAMLVFPRL CCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH WDWHLAWREARRGFFTAWEYDMLAFARSLTAAQTGWLTQSPQLAQRLSPLPGLIEASDIA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHH RAQADWARACADFHRHAGVRRREIDRLRRVHNDPFEPIAPVLEAQSPLGEYRKIAEEVAR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH RRPCPRRYPLAAAEASRAVLMIRLGLHLGFRQRNLRELLVCRRGARPRSERELAELRRGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC LRWSERAGGWEVFAPCLAFKNARSSFFSGRPYRLVLPDVAGLYDEIEAYLAEARPRLLRG CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC ADDPGTFFVKTMKSPNGAAAYDGTAFYQAWRWIIQRHGVFNPWTGRGAIAGLLPHGPHSV CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH RDVLAAHVLKHTGSFELASYAIQDTPETVARHYGRFLPQDKAELAGRVLNAAWSDED HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA