Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yeiB [H]

Identifier: 197105561

GI number: 197105561

Start: 2352960

End: 2354243

Strand: Direct

Name: yeiB [H]

Synonym: PHZ_c2098

Alternate gene names: 197105561

Gene position: 2352960-2354243 (Clockwise)

Preceding gene: 197105557

Following gene: 197105566

Centisome position: 58.88

GC content: 71.42

Gene sequence:

>1284_bases
ATGTCGGCCGCCACGACGCCCGCGGGCGAGCGTCACCAGTCCATCGACGCCGTGCGCGGCTTCGCCGTGCTGGGCATCCT
GCTGATGAACATCGTCGGCATGGGCCTGCCCTCGTTCGCCTACCTGGACCCCACCTACGCCGGCGGCGCCGAGGGCGCCG
ACCTGTGGACCTGGGCGGCCAGCAACGTCCTCGTCGACGGCAAGATGCGGGCGCTCTTCACCATGCTGTTCGGGGCCAGC
GCCGTGCTGATCGCGGAGCGCGCAGCGCGCAGCGAGGGGGGCCTAGGCCCCGCCCAGACCCACTATCGCCGACTGTTCTG
GCTGCTGCTGTTCGGCTTGGCGCACGCCTTCCTGGCCTGGTACGGCGACGTGCTGACCCTGTACGCGGTGGCGGGCCTGC
TCATCTTCCCGTTCCGCAAGCTGCCCGCGCGGATGCAGATCGCCCTGGGCGCGGCGATCCTCCTGCTCCTGCTGACCAAG
AACGTCTGGATGTCGGGCCAGATCGAGGCCCTGCGGGCCGCCGCGCTTGCGCCCGGCGCCGCCGCCGAGACCGTCCAGGC
CTGGCGCGAGACCTCGATGACGATCTCGCCCCCGCCCGAGGCGAAGGCCGCGGAGATCGCCCTCTTCCAGGGGAGCTTCG
CCGACGCGATCCAGGCGCGGGCGAACCTGCTGGGGCTGTTCTACGCCTTCCTGTTCCCGACCGAGATGCTGCCCGAGGCC
GTGGGCCAGATGTTCGTCGGCATGGGCCTGTTCCGGCTGGGCTTCTTCACCCTGGGCTGGAGCGGCCGCGCCTACGGCGC
CCTGATCGCCTTCGGCTACCTGGTCTGCGTCCCGGTCACGGCCTGGCTGGCGTGGCTGATCTGGAAGAGCGGGTTCGATC
CCCTGACGCTGCACGAAATGCAGGTGTGGCAGCAGCTCACCCGCCCGTTCATCGGCCTGGCGCACGCCGCCGTGCTGCTG
CTGGTCGTCCGGGCCGGCGTCGCACGCGGACTGGTCGGGCGGCTGGCCGACGCCGGCCGGATGGCGTTCAGCAACTATCT
GATGAGCTCGGTCCTCACGAGCCTGGTGTTCTGCGGCTACGGCCTAGGCCTGTTCGGCGAGCTGTCGCGCTTCCAGCTCC
TGGGCGTGGTCGCCGGGGTGTGGGCGTTCATGCTGGGATGGAGCACGCCGTGGCTGCGGCGCTTCCACTACGGCCCGTTC
GAGTGGGCCTGGCGCTCGCTGGTGCAGTGGCGGCTGCAGCCGTTCACCCGCAGGCCGGCGGGAGCCGCCGCGGCCGCGGG
ATAG

Upstream 100 bases:

>100_bases
CAAGCCCCCTGGCCAAGGTCCATAGGGGTAACGCGGTTCGCCGACGTTGACATGCCGCGCGGGGCGCACATGCTCGCCCG
CTCAACGGGGGAAGCAAGGA

Downstream 100 bases:

>100_bases
GTCGACCGGCCGCCTACGCCGTCACCTGCGGCCGCGGGCGACGAGGGCCTCAAGCCCCGGATCCGGCGTGTCGGACGGCC
GCGCGCCGTAGGCGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSAATTPAGERHQSIDAVRGFAVLGILLMNIVGMGLPSFAYLDPTYAGGAEGADLWTWAASNVLVDGKMRALFTMLFGAS
AVLIAERAARSEGGLGPAQTHYRRLFWLLLFGLAHAFLAWYGDVLTLYAVAGLLIFPFRKLPARMQIALGAAILLLLLTK
NVWMSGQIEALRAAALAPGAAAETVQAWRETSMTISPPPEAKAAEIALFQGSFADAIQARANLLGLFYAFLFPTEMLPEA
VGQMFVGMGLFRLGFFTLGWSGRAYGALIAFGYLVCVPVTAWLAWLIWKSGFDPLTLHEMQVWQQLTRPFIGLAHAAVLL
LVVRAGVARGLVGRLADAGRMAFSNYLMSSVLTSLVFCGYGLGLFGELSRFQLLGVVAGVWAFMLGWSTPWLRRFHYGPF
EWAWRSLVQWRLQPFTRRPAGAAAAAG

Sequences:

>Translated_427_residues
MSAATTPAGERHQSIDAVRGFAVLGILLMNIVGMGLPSFAYLDPTYAGGAEGADLWTWAASNVLVDGKMRALFTMLFGAS
AVLIAERAARSEGGLGPAQTHYRRLFWLLLFGLAHAFLAWYGDVLTLYAVAGLLIFPFRKLPARMQIALGAAILLLLLTK
NVWMSGQIEALRAAALAPGAAAETVQAWRETSMTISPPPEAKAAEIALFQGSFADAIQARANLLGLFYAFLFPTEMLPEA
VGQMFVGMGLFRLGFFTLGWSGRAYGALIAFGYLVCVPVTAWLAWLIWKSGFDPLTLHEMQVWQQLTRPFIGLAHAAVLL
LVVRAGVARGLVGRLADAGRMAFSNYLMSSVLTSLVFCGYGLGLFGELSRFQLLGVVAGVWAFMLGWSTPWLRRFHYGPF
EWAWRSLVQWRLQPFTRRPAGAAAAAG
>Mature_426_residues
SAATTPAGERHQSIDAVRGFAVLGILLMNIVGMGLPSFAYLDPTYAGGAEGADLWTWAASNVLVDGKMRALFTMLFGASA
VLIAERAARSEGGLGPAQTHYRRLFWLLLFGLAHAFLAWYGDVLTLYAVAGLLIFPFRKLPARMQIALGAAILLLLLTKN
VWMSGQIEALRAAALAPGAAAETVQAWRETSMTISPPPEAKAAEIALFQGSFADAIQARANLLGLFYAFLFPTEMLPEAV
GQMFVGMGLFRLGFFTLGWSGRAYGALIAFGYLVCVPVTAWLAWLIWKSGFDPLTLHEMQVWQQLTRPFIGLAHAAVLLL
VVRAGVARGLVGRLADAGRMAFSNYLMSSVLTSLVFCGYGLGLFGELSRFQLLGVVAGVWAFMLGWSTPWLRRFHYGPFE
WAWRSLVQWRLQPFTRRPAGAAAAAG

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yxaH and yrkO [H]

Homologues:

Organism=Escherichia coli, GI1788475, Length=403, Percent_Identity=29.2803970223325, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 46363; Mature: 46232

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAATTPAGERHQSIDAVRGFAVLGILLMNIVGMGLPSFAYLDPTYAGGAEGADLWTWAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHH
SNVLVDGKMRALFTMLFGASAVLIAERAARSEGGLGPAQTHYRRLFWLLLFGLAHAFLAW
CCEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGDVLTLYAVAGLLIFPFRKLPARMQIALGAAILLLLLTKNVWMSGQIEALRAAALAPGA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
AAETVQAWRETSMTISPPPEAKAAEIALFQGSFADAIQARANLLGLFYAFLFPTEMLPEA
HHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VGQMFVGMGLFRLGFFTLGWSGRAYGALIAFGYLVCVPVTAWLAWLIWKSGFDPLTLHEM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVWQQLTRPFIGLAHAAVLLLVVRAGVARGLVGRLADAGRMAFSNYLMSSVLTSLVFCGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGLFGELSRFQLLGVVAGVWAFMLGWSTPWLRRFHYGPFEWAWRSLVQWRLQPFTRRPA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GAAAAAG
CCCCCCC
>Mature Secondary Structure 
SAATTPAGERHQSIDAVRGFAVLGILLMNIVGMGLPSFAYLDPTYAGGAEGADLWTWAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHH
SNVLVDGKMRALFTMLFGASAVLIAERAARSEGGLGPAQTHYRRLFWLLLFGLAHAFLAW
CCEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGDVLTLYAVAGLLIFPFRKLPARMQIALGAAILLLLLTKNVWMSGQIEALRAAALAPGA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
AAETVQAWRETSMTISPPPEAKAAEIALFQGSFADAIQARANLLGLFYAFLFPTEMLPEA
HHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VGQMFVGMGLFRLGFFTLGWSGRAYGALIAFGYLVCVPVTAWLAWLIWKSGFDPLTLHEM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVWQQLTRPFIGLAHAAVLLLVVRAGVARGLVGRLADAGRMAFSNYLMSSVLTSLVFCGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGLFGELSRFQLLGVVAGVWAFMLGWSTPWLRRFHYGPFEWAWRSLVQWRLQPFTRRPA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GAAAAAG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 1619663 [H]