| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105545
Identifier: 197105545
GI number: 197105545
Start: 2334687
End: 2335238
Strand: Reverse
Name: 197105545
Synonym: PHZ_c2082
Alternate gene names: NA
Gene position: 2335238-2334687 (Counterclockwise)
Preceding gene: 197105546
Following gene: 197105542
Centisome position: 58.44
GC content: 69.75
Gene sequence:
>552_bases ATGTCCCGGCCCGCGAACGAGAAGCTGACCTACCCGCCGCCCGCCGCGGAGGACATGGGCCTCGTCCTGCGGCGGAACAT CGAGGCGATGCGGGCCCAGCGGGCGCGCGAGGAGGCGCAGGCGGGGATCGGCGAGCGCATCGCCGAACGGATCACCGCCT TCACCGGCTCGCTCACCTTCGTCTGCCTGCACGTGGCCCTGGTCTCGGCGTGGGTGGCCGTGAACCTCGGGTTCGTGCCG GGGGTCGAGCGCTTCGATCCGACCTTTGTGATCCTGGCCACCGTGGCCTCGGTGGAGGCGATCTTCCTTTCGACCTTCGT GCTCATCAGCCAGAACCGCAACGCCGCGATCGGCGAGAAGCGCGCGGCCCTGGACCTGCAGATCAACCTGCTCGCCGAGT ACGAGATCACCCAGCTCGTGAAGATGACGACGGCCCTGGCGGAGAAGGCCGGGGTCGAGGTCGAGCGTCCCAAGATCGAC GAGATCAGCCGCGAGGTCGCGCCCGAGGCCGTGCTCGAGGAGCTGGCCCAGGACGAGCGCGAGCCGCCCTAG
Upstream 100 bases:
>100_bases GAGGCCCGCGAGGGCCGCGACCGGAAAGGCAAGCGGGCGGACGTCGTGCGGCTCTCGGCCTGAGGGCGGAACGGCGCCCG CTCACGGGAATTCCTCGGCC
Downstream 100 bases:
>100_bases ACGTCGAAGACGGCGAACTCGACGCCGACGTCCCGGTTCAGCACCGGCTTGGCGACATTGTAGACCGGCACCCCGCGCGC CGTCCGGCCTTCATAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSRPANEKLTYPPPAAEDMGLVLRRNIEAMRAQRAREEAQAGIGERIAERITAFTGSLTFVCLHVALVSAWVAVNLGFVP GVERFDPTFVILATVASVEAIFLSTFVLISQNRNAAIGEKRAALDLQINLLAEYEITQLVKMTTALAEKAGVEVERPKID EISREVAPEAVLEELAQDEREPP
Sequences:
>Translated_183_residues MSRPANEKLTYPPPAAEDMGLVLRRNIEAMRAQRAREEAQAGIGERIAERITAFTGSLTFVCLHVALVSAWVAVNLGFVP GVERFDPTFVILATVASVEAIFLSTFVLISQNRNAAIGEKRAALDLQINLLAEYEITQLVKMTTALAEKAGVEVERPKID EISREVAPEAVLEELAQDEREPP >Mature_182_residues SRPANEKLTYPPPAAEDMGLVLRRNIEAMRAQRAREEAQAGIGERIAERITAFTGSLTFVCLHVALVSAWVAVNLGFVPG VERFDPTFVILATVASVEAIFLSTFVLISQNRNAAIGEKRAALDLQINLLAEYEITQLVKMTTALAEKAGVEVERPKIDE ISREVAPEAVLEELAQDEREPP
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20070; Mature: 19939
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPANEKLTYPPPAAEDMGLVLRRNIEAMRAQRAREEAQAGIGERIAERITAFTGSLTF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VCLHVALVSAWVAVNLGFVPGVERFDPTFVILATVASVEAIFLSTFVLISQNRNAAIGEK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH RAALDLQINLLAEYEITQLVKMTTALAEKAGVEVERPKIDEISREVAPEAVLEELAQDER HHEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCC EPP CCC >Mature Secondary Structure SRPANEKLTYPPPAAEDMGLVLRRNIEAMRAQRAREEAQAGIGERIAERITAFTGSLTF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VCLHVALVSAWVAVNLGFVPGVERFDPTFVILATVASVEAIFLSTFVLISQNRNAAIGEK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH RAALDLQINLLAEYEITQLVKMTTALAEKAGVEVERPKIDEISREVAPEAVLEELAQDER HHEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCC EPP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA